FFCP PHASE2:Hg19::chr10:102279586..102279637,-: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:25956 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:23197 |TSScla...") |
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=25956 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=23197 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=Q9NQW1,F6TTE0,A8KAL6 | ||
|association_with_transcript=0bp_to_ENST00000370345,ENST00000451524,ENST00000462434,ENST00000479697,ENST00000480905,ENST00000482456,NM_015490,uc001krc.1,uc001krd.1,uc001kre.1,uc001krf.1,uc009xwn.1,uc010qpp.1_5end | |association_with_transcript=0bp_to_ENST00000370345,ENST00000451524,ENST00000462434,ENST00000479697,ENST00000480905,ENST00000482456,NM_015490,uc001krc.1,uc001krd.1,uc001kre.1,uc001krf.1,uc009xwn.1,uc010qpp.1_5end | ||
|cluster_id=chr10:102279586..102279637,- | |cluster_id=chr10:102279586..102279637,- | ||
Latest revision as of 21:52, 15 September 2015
| Short description: | p2@SEC31B |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_2_at_SEC31B_5end |
| Coexpression cluster: | C1101_testis_cerebellum_parietal_medial_occipital_middle_pituitary |
| Association with transcript: | 0bp_to_ENST00000370345, ENST00000451524, ENST00000462434, ENST00000479697, ENST00000480905, ENST00000482456, NM_015490, uc001krc.1, uc001krd.1, uc001kre.1, uc001krf.1, uc009xwn.1, uc010qpp.1_5end |
| EntrezGene: | SEC31B |
| HGNC: | 23197 |
| UniProt: | Q9NQW1F6TTE0A8KAL6 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p2@SEC31B |
|---|
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| adult organism | 3.27e-83 | 114 |
| neural tube | 3.73e-71 | 56 |
| neural rod | 3.73e-71 | 56 |
| future spinal cord | 3.73e-71 | 56 |
| neural keel | 3.73e-71 | 56 |
| regional part of nervous system | 3.30e-65 | 53 |
| regional part of brain | 3.30e-65 | 53 |
| central nervous system | 6.28e-55 | 81 |
| neural plate | 8.04e-55 | 82 |
| presumptive neural plate | 8.04e-55 | 82 |
Showing 1 to 10 of 68 entries
