FFCP PHASE2:Hg19::chr2:69002052..69002083,+: Difference between revisions
From FANTOM5_SSTAR
Jump to: navigation, search
(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:9938 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:28951 |TSSclas...") |
No edit summary |
||
| Line 2: | Line 2: | ||
|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=9938 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=28951 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt= | ||
Latest revision as of 03:07, 18 September 2015
| Short description: | p2@ARHGAP25 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_2_at_ARHGAP25_5end |
| Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
| Association with transcript: | 0bp_to_ENST00000497079_5end |
| EntrezGene: | ARHGAP25 |
| HGNC: | 28951 |
| UniProt: | NA |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p2@ARHGAP25 |
|---|
0
50
100
150
200
250
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| hematopoietic stem cell | 4.79e-63 | 168 |
| hematopoietic oligopotent progenitor cell | 3.48e-59 | 161 |
| hematopoietic multipotent progenitor cell | 3.48e-59 | 161 |
| hematopoietic cell | 3.23e-57 | 177 |
| leukocyte | 3.80e-54 | 136 |
| nongranular leukocyte | 3.68e-44 | 115 |
| hematopoietic lineage restricted progenitor cell | 6.94e-44 | 120 |
| myeloid cell | 1.37e-40 | 108 |
| common myeloid progenitor | 1.37e-40 | 108 |
| myeloid leukocyte | 8.93e-37 | 72 |
Showing 1 to 10 of 42 entries
| Ontology term | p-value | n |
|---|---|---|
| hemolymphoid system | 5.14e-43 | 108 |
| hematopoietic system | 4.39e-37 | 98 |
| blood island | 4.39e-37 | 98 |
| immune system | 1.26e-34 | 93 |
| bone marrow | 4.04e-26 | 76 |
| bone element | 1.46e-22 | 82 |
| skeletal element | 1.24e-18 | 90 |
| lateral plate mesoderm | 1.22e-15 | 203 |
| skeletal system | 1.01e-14 | 100 |
| connective tissue | 2.08e-13 | 371 |
Showing 1 to 10 of 14 entries
| Ontology term | p-value | n |
|---|---|---|
| myeloid leukemia | 8.08e-08 | 31 |
| leukemia | 4.00e-07 | 39 |
Showing 1 to 2 of 2 entries
