FFCP PHASE2:Mm9::chr4:48598148..48598200,+: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=NA |DPIdataset=NA |EntrezGene=entrezgene:230157 |HGNC= |MCL_coexpression_id=22 |TSSclassifier=NA |UniProt=uniprot:Q6PFE7 |association_with_transcript=-36bp_...") |
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|DHSsupport=NA | |DHSsupport=NA | ||
|DPIdataset=NA | |DPIdataset=NA | ||
|EntrezGene= | |EntrezGene=230157 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=22 | |MCL_coexpression_id=22 | ||
|TSSclassifier=NA | |TSSclassifier=NA | ||
|UniProt= | |UniProt=Q6PFE7 | ||
|association_with_transcript=-36bp_to_ENSMUST00000123476_5end | |association_with_transcript=-36bp_to_ENSMUST00000123476_5end | ||
|cluster_id=chr4:48598148..48598200,+ | |cluster_id=chr4:48598148..48598200,+ | ||
Latest revision as of 01:54, 27 September 2015
| Short description: | p3@Tmeff1 |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_3_at_Tmeff1_5end |
| Coexpression cluster: | MCL_coexpression_mm9:22 |
| Association with transcript: | -36bp_to_ENSMUST00000123476_5end |
| EntrezGene: | Tmeff1 |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p3@Tmeff1 |
|---|
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| neuron | 2.05e-16 | 33 |
| neuronal stem cell | 2.05e-16 | 33 |
| neuroblast | 2.05e-16 | 33 |
| electrically signaling cell | 2.05e-16 | 33 |
| CNS neuron (sensu Vertebrata) | 2.31e-16 | 23 |
| neuroblast (sensu Vertebrata) | 2.31e-16 | 23 |
| electrically responsive cell | 5.21e-12 | 39 |
| electrically active cell | 5.21e-12 | 39 |
| ectodermal cell | 2.09e-09 | 44 |
| neurectodermal cell | 2.09e-09 | 44 |
Showing 1 to 10 of 11 entries
| Ontology term | p-value | n |
|---|---|---|
| neurectoderm | 4.75e-23 | 64 |
| neural plate | 4.75e-23 | 64 |
| presumptive neural plate | 4.75e-23 | 64 |
| central nervous system | 2.51e-21 | 73 |
| pre-chordal neural plate | 2.53e-20 | 49 |
| nervous system | 5.44e-20 | 75 |
| regional part of nervous system | 5.82e-20 | 54 |
| neural tube | 5.10e-19 | 52 |
| neural rod | 5.10e-19 | 52 |
| future spinal cord | 5.10e-19 | 52 |
Showing 1 to 10 of 31 entries
