FFCP PHASE2:Mm9::chr3:107320687..107320710,-: Difference between revisions
From FANTOM5_SSTAR
Jump to: navigation, search
(Created page with "{{FFCP |DHSsupport=NA |DPIdataset=NA |EntrezGene=entrezgene:229706 |HGNC= |MCL_coexpression_id=1 |TSSclassifier=NA |UniProt= |association_with_transcript=-20bp_to_ENSMUST00000...") |
No edit summary |
||
Line 2: | Line 2: | ||
|DHSsupport=NA | |DHSsupport=NA | ||
|DPIdataset=NA | |DPIdataset=NA | ||
|EntrezGene= | |EntrezGene=229706 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1 | |MCL_coexpression_id=1 |
Latest revision as of 07:05, 27 September 2015
Short description: | p4@Slc6a17 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Slc6a17_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | -20bp_to_ENSMUST00000170429_5end |
EntrezGene: | Slc6a17 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p4@Slc6a17 |
---|
0.0
2.5
5.0
7.5
10.0
12.5
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 2.78e-12 | 23 |
neuroblast (sensu Vertebrata) | 2.78e-12 | 23 |
neuron | 9.87e-08 | 33 |
neuronal stem cell | 9.87e-08 | 33 |
neuroblast | 9.87e-08 | 33 |
electrically signaling cell | 9.87e-08 | 33 |
raphe nuclei neuron | 2.35e-07 | 3 |
neuron of the substantia nigra | 3.50e-07 | 3 |
Showing 1 to 8 of 8 entries
Ontology term | p-value | n |
---|---|---|
regional part of nervous system | 9.91e-47 | 54 |
neural tube | 1.19e-42 | 52 |
neural rod | 1.19e-42 | 52 |
future spinal cord | 1.19e-42 | 52 |
neural keel | 1.19e-42 | 52 |
central nervous system | 6.32e-39 | 73 |
nervous system | 1.14e-37 | 75 |
gray matter | 1.42e-35 | 34 |
brain | 1.27e-34 | 47 |
future brain | 1.27e-34 | 47 |
Showing 1 to 10 of 62 entries