FFCP PHASE2:Mm9::chr11:5965771..5965782,-: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=NA |DPIdataset=NA |EntrezGene=entrezgene:12323 |HGNC= |MCL_coexpression_id=1 |TSSclassifier=NA |UniProt=uniprot:Q68EG2,uniprot:P28652,uniprot:Q8BL41,uniprot...") |
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|DHSsupport=NA | |DHSsupport=NA | ||
|DPIdataset=NA | |DPIdataset=NA | ||
|EntrezGene= | |EntrezGene=12323 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1 | |MCL_coexpression_id=1 | ||
|TSSclassifier=NA | |TSSclassifier=NA | ||
|UniProt= | |UniProt=Q68EG2,P28652,Q8BL41,Q5SVI2 | ||
|association_with_transcript=-20bp_to_ENSMUST00000090443,ENSMUST00000109813,NM_001174053,NM_001174054,NM_007595,uc007hxr.2,uc007hxs.2,uc007hxt.2,uc007hxw.1_5end | |association_with_transcript=-20bp_to_ENSMUST00000090443,ENSMUST00000109813,NM_001174053,NM_001174054,NM_007595,uc007hxr.2,uc007hxs.2,uc007hxt.2,uc007hxw.1_5end | ||
|cluster_id=chr11:5965771..5965782,- | |cluster_id=chr11:5965771..5965782,- | ||
Latest revision as of 19:43, 1 October 2015
| Short description: | p6@Camk2b |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_6_at_Camk2b_5end |
| Coexpression cluster: | MCL_coexpression_mm9:1 |
| Association with transcript: | -20bp_to_ENSMUST00000090443, ENSMUST00000109813, NM_001174053, NM_001174054, NM_007595, uc007hxr.2, uc007hxs.2, uc007hxt.2, uc007hxw.1_5end |
| EntrezGene: | Camk2b |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p6@Camk2b |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| CNS neuron (sensu Vertebrata) | 1.09e-18 | 23 |
| neuroblast (sensu Vertebrata) | 1.09e-18 | 23 |
| neuron | 1.04e-11 | 33 |
| neuronal stem cell | 1.04e-11 | 33 |
| neuroblast | 1.04e-11 | 33 |
| electrically signaling cell | 1.04e-11 | 33 |
| electrically responsive cell | 2.86e-09 | 39 |
| electrically active cell | 2.86e-09 | 39 |
| neural cell | 4.93e-08 | 43 |
| ectodermal cell | 9.24e-08 | 44 |
Showing 1 to 10 of 12 entries
| Ontology term | p-value | n |
|---|---|---|
| regional part of nervous system | 2.60e-40 | 54 |
| central nervous system | 3.00e-37 | 73 |
| neural tube | 9.73e-37 | 52 |
| neural rod | 9.73e-37 | 52 |
| future spinal cord | 9.73e-37 | 52 |
| neural keel | 9.73e-37 | 52 |
| nervous system | 5.52e-36 | 75 |
| gray matter | 1.06e-30 | 34 |
| neurectoderm | 6.22e-30 | 64 |
| neural plate | 6.22e-30 | 64 |
Showing 1 to 10 of 51 entries
