FFCP PHASE1:Mm9::chr1:87546583..87546595,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 8: | Line 8: | ||
|id=chr1:87546583..87546595,+ | |id=chr1:87546583..87546595,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002405!2.34e-10!70;UBERON:0002193!5.54e-10!48;UBERON:0000926!7.53e-10!193;UBERON:0004120!7.53e-10!193;UBERON:0006603!7.53e-10!193;UBERON:0002390!6.10e-09!45;UBERON:0003061!6.10e-09!45;UBERON:0003104!7.47e-09!131;UBERON:0009142!7.47e-09!131;UBERON:0003081!1.04e-08!88;UBERON:0004119!1.46e-08!130;UBERON:0000925!1.46e-08!130;UBERON:0006595!1.46e-08!130;UBERON:0001007!1.93e-08!128;UBERON:0001555!1.93e-08!128;UBERON:0007026!1.93e-08!128;UBERON:0004921!5.28e-08!126;UBERON:0004185!5.28e-08!126;UBERON:0005057!1.11e-07!51;UBERON:0004177!1.14e-07!29;UBERON:0000490!2.76e-07!66;UBERON:0005911!5.67e-07!69 | |ontology_enrichment_uberon=UBERON:0002405!2.34e-10!70;UBERON:0002193!5.54e-10!48;UBERON:0000926!7.53e-10!193;UBERON:0004120!7.53e-10!193;UBERON:0006603!7.53e-10!193;UBERON:0002390!6.10e-09!45;UBERON:0003061!6.10e-09!45;UBERON:0003104!7.47e-09!131;UBERON:0009142!7.47e-09!131;UBERON:0003081!1.04e-08!88;UBERON:0004119!1.46e-08!130;UBERON:0000925!1.46e-08!130;UBERON:0006595!1.46e-08!130;UBERON:0001007!1.93e-08!128;UBERON:0001555!1.93e-08!128;UBERON:0007026!1.93e-08!128;UBERON:0004921!5.28e-08!126;UBERON:0004185!5.28e-08!126;UBERON:0005057!1.11e-07!51;UBERON:0004177!1.14e-07!29;UBERON:0000490!2.76e-07!66;UBERON:0005911!5.67e-07!69 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,2.99e-12,48;UBERON:0002405,2.99e-12,48;UBERON:0002390,6.92e-11,45;UBERON:0003061,6.92e-11,45;UBERON:0004119,3.42e-08,118;UBERON:0000925,3.42e-08,118;UBERON:0006595,3.42e-08,118;UBERON:0003081,3.52e-08,87;UBERON:0001007,3.55e-08,116;UBERON:0001555,3.55e-08,116;UBERON:0007026,3.55e-08,116;UBERON:0004177,1.08e-07,29;UBERON:0005057,1.08e-07,29;UBERON:0004921,1.14e-07,114;UBERON:0000077,1.92e-07,35;UBERON:0000926,4.97e-07,120;UBERON:0004120,4.97e-07,120;UBERON:0006603,4.97e-07,120;UBERON:0001041,8.64e-07,80 | |||
|phase1_expression=0.160148847104794,6.97950815278722,5.45999087267443,3.32710632437513,3.00537437967808,1.17515490338323,0.467225281191051,27.2450212461726,0.140788722151667,1.40438715793196,0.856089841127525,0.797721589953364,18.318478102639,18.6205457152464,7.32841475994458,12.9584171129489,5.59649502502517,34.0699138586897,34.5528372686462,22.0682618934976,2.38121212422995,4.86525660884338,2.61199789138935,2.3998863419011,2.2940928106717,2.29692785646008,2.15380998079537,1.72376986148711,0.950117097281869,2.52030129759931,0.443461021310609,0,0,0,0,0.498703936075477,0.204169356262369,52.3164538421135,18.7520482685712,59.681706813013,69.4113155876597,45.0810020072574,59.7177734228319,0.503587271902309,1.11514624341466,0.550640256485045,0,0,0,0,0,0,19.7983475148129,2.17608642603403,6.72187598284928,0.257259436035947,1.14613375975503,1.03134418455488,0,0,0,0,0,0,0,2.1314403448383,0,0,0,0,0,0,0,0,0,0,0,0.127687338085188,0,0,0,0,0,0,0.15279824777681,0,0,0,0.227178579999552,0.0755715601067855,13.3337664802772,5.16254326188832,0,0.539703191637817,0,0.896053774194671,0.702222100658759,0.511290967734173,0.519572009205738,0.35333957451034,0,0,2.54805239706646,0,0.216491041011214,0,0,2.39786147410026,45.0551917546079,3.71105347662062,0,0,0,0.452167921657868,1.29347577849275,2.01066546127481,0.494389935468748,5.20557684911682,10.6153266233985,1.29413479957927,4.41683036920787,2.42437626567611,1.86391761218122,0.585561594023094,0.41889341362691,3.0654846625031,4.43315960671905,0,4.82866862877646,0.299581278809645,0,0,0.173824320192276,0,0.20778804455956,0.324482526135515,0.509196819251581,4.10543003013307,0.758168275301024,0.420883711772948,0,0,0,0,0.0680364991513279,0.2562274405697,0.0937017245597288,1.55222022443409,0,0,0,0,0,0,0.411564272815887,0,1.40442637462647,0,1.98914449576915,0,0,0,0,0.393528463494808,0.154267112887378,0.232533944750408,0.804820204198858,0.700592054203017,0.822799249567402,2.46251196118643,3.97237166774693,6.43279944671462,4.83010253640311,4.56301823785264,0.210289948564127,0,9.91256348951394,3.17340679996253,0,0,0,0,0,0.951128130562796,1.89811624617805,0.164698954724011,0.251335208800269,0.397912944082302,1.36474860983384,3.59527763461689,1.94524244887225,2.78797782556114,0,0.114248512609729,0,0.610953983535943,0.581857461502877,0.98190147846446,2.71917109634306,3.69025369949005,4.39596437955849,2.59134044235781,0.889357881261447,0.166845105716094,0.589676985339609,0.224862112384854,0,0.482354319504834,0,1.43848068725405,1.45921704097532,2.74561413188081,7.18841032636773,3.34926852901653,2.49630138491648,1.51547326768267,1.25578189465339,1.92977408545347,10.5309318394965,0,0,0.169745085775188,0,0,0.714130922658041,1.17080188714679,2.04925687338048,2.87904096543407,3.02964060449226,8.84861899464985,10.8791538575514,6.50920763616802,4.52373851817817,12.5098307278303,0.491764273019036,3.03530420935206,0.160550589987792,0.35163505977661,0.163934945376675,2.7771801992481,0,0,0,0,0,0,0,0,0,0,2.55492153374884,0.178065603667255,0.162886959353576,3.79431282836832,0,0,0,0.188605079755898,0,0.614870295887855,0.775284879504663,1.81766864738753,0.712994756769443,4.42451461110142,0,1.03135543248187,0,0,0,0,0,0,0,0.913394847343798,2.11204537257339,0.21183207086382,0.882113592219848,0.65954501176592,1.29171541356724,0.844380948994182,0.954978752025092,0.492422699235184,2.04036585640896,0.927126510052548,8.20180227829693,0.82554747185289,5.18544676635193,8.09984365120171,17.9069438314543,18.3022538565218,5.43930975980337,5.59805809294632,5.66619892598138,5.72802370809068,0,0,0.324016022465404,0,0.436725127492355,0.134864346384821,0.909188012978695,1.57053565190418,2.33306951925227,4.97071450469541,0,0,0.165458490457098,0,0.129159823477731,0.506868376472335,0.234714477291508,0.5208175393758,0.104859344425711,0.241584120826006,0,5.05617793005085,0.202725215290164,0.718976700153791,1.68897069871134,1.43221356533985,2.98022032171897,4.68762253127878,5.75989155980851,5.04832249740738,5.79171730577999,6.25122347848411,9.25849867027648,11.1605736302782,12.739582337791,1.81384306892169,0,0,0,0.965947970160952,3.37828455812128,8.05867146775966,2.14368379079066,0.501572104035363,0,0,0,0,0,0,0.675022500231806,0,0,0,0.103787347584177,0,0,0,0,0.367687016900028,0,0.206035057238894,0,0.252697211763798,0,0.377252682772152,0.280924522409647,0.576226371643824,0.574354689556133,0,0.347652977834566,0.578727661391115,0.412085900803307,0,0,0,0,0.145346416632329,0,0.169229215783353,0.182927972872773,0,0.814824683075171,0,0.237270036248348,0.394017929502254,0,0.464810523557898,0.192906610981141,0,0.701794825336225,0.429742108096597,0.382576664137687,1.54413993383661,1.39120701372253 | |phase1_expression=0.160148847104794,6.97950815278722,5.45999087267443,3.32710632437513,3.00537437967808,1.17515490338323,0.467225281191051,27.2450212461726,0.140788722151667,1.40438715793196,0.856089841127525,0.797721589953364,18.318478102639,18.6205457152464,7.32841475994458,12.9584171129489,5.59649502502517,34.0699138586897,34.5528372686462,22.0682618934976,2.38121212422995,4.86525660884338,2.61199789138935,2.3998863419011,2.2940928106717,2.29692785646008,2.15380998079537,1.72376986148711,0.950117097281869,2.52030129759931,0.443461021310609,0,0,0,0,0.498703936075477,0.204169356262369,52.3164538421135,18.7520482685712,59.681706813013,69.4113155876597,45.0810020072574,59.7177734228319,0.503587271902309,1.11514624341466,0.550640256485045,0,0,0,0,0,0,19.7983475148129,2.17608642603403,6.72187598284928,0.257259436035947,1.14613375975503,1.03134418455488,0,0,0,0,0,0,0,2.1314403448383,0,0,0,0,0,0,0,0,0,0,0,0.127687338085188,0,0,0,0,0,0,0.15279824777681,0,0,0,0.227178579999552,0.0755715601067855,13.3337664802772,5.16254326188832,0,0.539703191637817,0,0.896053774194671,0.702222100658759,0.511290967734173,0.519572009205738,0.35333957451034,0,0,2.54805239706646,0,0.216491041011214,0,0,2.39786147410026,45.0551917546079,3.71105347662062,0,0,0,0.452167921657868,1.29347577849275,2.01066546127481,0.494389935468748,5.20557684911682,10.6153266233985,1.29413479957927,4.41683036920787,2.42437626567611,1.86391761218122,0.585561594023094,0.41889341362691,3.0654846625031,4.43315960671905,0,4.82866862877646,0.299581278809645,0,0,0.173824320192276,0,0.20778804455956,0.324482526135515,0.509196819251581,4.10543003013307,0.758168275301024,0.420883711772948,0,0,0,0,0.0680364991513279,0.2562274405697,0.0937017245597288,1.55222022443409,0,0,0,0,0,0,0.411564272815887,0,1.40442637462647,0,1.98914449576915,0,0,0,0,0.393528463494808,0.154267112887378,0.232533944750408,0.804820204198858,0.700592054203017,0.822799249567402,2.46251196118643,3.97237166774693,6.43279944671462,4.83010253640311,4.56301823785264,0.210289948564127,0,9.91256348951394,3.17340679996253,0,0,0,0,0,0.951128130562796,1.89811624617805,0.164698954724011,0.251335208800269,0.397912944082302,1.36474860983384,3.59527763461689,1.94524244887225,2.78797782556114,0,0.114248512609729,0,0.610953983535943,0.581857461502877,0.98190147846446,2.71917109634306,3.69025369949005,4.39596437955849,2.59134044235781,0.889357881261447,0.166845105716094,0.589676985339609,0.224862112384854,0,0.482354319504834,0,1.43848068725405,1.45921704097532,2.74561413188081,7.18841032636773,3.34926852901653,2.49630138491648,1.51547326768267,1.25578189465339,1.92977408545347,10.5309318394965,0,0,0.169745085775188,0,0,0.714130922658041,1.17080188714679,2.04925687338048,2.87904096543407,3.02964060449226,8.84861899464985,10.8791538575514,6.50920763616802,4.52373851817817,12.5098307278303,0.491764273019036,3.03530420935206,0.160550589987792,0.35163505977661,0.163934945376675,2.7771801992481,0,0,0,0,0,0,0,0,0,0,2.55492153374884,0.178065603667255,0.162886959353576,3.79431282836832,0,0,0,0.188605079755898,0,0.614870295887855,0.775284879504663,1.81766864738753,0.712994756769443,4.42451461110142,0,1.03135543248187,0,0,0,0,0,0,0,0.913394847343798,2.11204537257339,0.21183207086382,0.882113592219848,0.65954501176592,1.29171541356724,0.844380948994182,0.954978752025092,0.492422699235184,2.04036585640896,0.927126510052548,8.20180227829693,0.82554747185289,5.18544676635193,8.09984365120171,17.9069438314543,18.3022538565218,5.43930975980337,5.59805809294632,5.66619892598138,5.72802370809068,0,0,0.324016022465404,0,0.436725127492355,0.134864346384821,0.909188012978695,1.57053565190418,2.33306951925227,4.97071450469541,0,0,0.165458490457098,0,0.129159823477731,0.506868376472335,0.234714477291508,0.5208175393758,0.104859344425711,0.241584120826006,0,5.05617793005085,0.202725215290164,0.718976700153791,1.68897069871134,1.43221356533985,2.98022032171897,4.68762253127878,5.75989155980851,5.04832249740738,5.79171730577999,6.25122347848411,9.25849867027648,11.1605736302782,12.739582337791,1.81384306892169,0,0,0,0.965947970160952,3.37828455812128,8.05867146775966,2.14368379079066,0.501572104035363,0,0,0,0,0,0,0.675022500231806,0,0,0,0.103787347584177,0,0,0,0,0.367687016900028,0,0.206035057238894,0,0.252697211763798,0,0.377252682772152,0.280924522409647,0.576226371643824,0.574354689556133,0,0.347652977834566,0.578727661391115,0.412085900803307,0,0,0,0,0.145346416632329,0,0.169229215783353,0.182927972872773,0,0.814824683075171,0,0.237270036248348,0.394017929502254,0,0.464810523557898,0.192906610981141,0,0.701794825336225,0.429742108096597,0.382576664137687,1.54413993383661,1.39120701372253 | ||
|short_description=p1@Sp100 | |short_description=p1@Sp100 | ||
}} | }} |
Revision as of 05:28, 14 November 2012
Short description: | p1@Sp100 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Sp100_5end |
Coexpression cluster: | MCL_coexpression_mm9:177 |
Association with transcript: | 0bp_to_ENSMUST00000054279, ENSMUST00000145440, ENSMUST00000147552, ENSMUST00000150967, ENSMUST00000153574_5end |
EntrezGene: | Sp100 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 2.99e-12 | 48 |
immune system | 2.99e-12 | 48 |
hematopoietic system | 6.92e-11 | 45 |
blood island | 6.92e-11 | 45 |
endoderm-derived structure | 3.42e-08 | 118 |
endoderm | 3.42e-08 | 118 |
presumptive endoderm | 3.42e-08 | 118 |
lateral plate mesoderm | 3.52e-08 | 87 |
digestive system | 3.55e-08 | 116 |
digestive tract | 3.55e-08 | 116 |
primitive gut | 3.55e-08 | 116 |
hemopoietic organ | 1.08e-07 | 29 |
immune organ | 1.08e-07 | 29 |
subdivision of digestive tract | 1.14e-07 | 114 |
mixed endoderm/mesoderm-derived structure | 1.92e-07 | 35 |
mesoderm | 4.97e-07 | 120 |
mesoderm-derived structure | 4.97e-07 | 120 |
presumptive mesoderm | 4.97e-07 | 120 |
foregut | 8.64e-07 | 80 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.