FFCP PHASE1:Mm9::chr1:107253235..107253291,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 7: | Line 7: | ||
|id=chr1:107253235..107253291,- | |id=chr1:107253235..107253291,- | ||
|ontology_enrichment_celltype=CL:0000117!8.92e-08!23;CL:0000337!8.92e-08!23 | |ontology_enrichment_celltype=CL:0000117!8.92e-08!23;CL:0000337!8.92e-08!23 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,6.28e-08,23;CL:0000337,6.28e-08,23 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002020!6.41e-08!34;UBERON:0001049!1.27e-07!52;UBERON:0005068!1.27e-07!52;UBERON:0006241!1.27e-07!52;UBERON:0007135!1.27e-07!52;UBERON:0000468!1.29e-07!333;UBERON:0001017!5.98e-07!73;UBERON:0005743!5.98e-07!73 | |ontology_enrichment_uberon=UBERON:0002020!6.41e-08!34;UBERON:0001049!1.27e-07!52;UBERON:0005068!1.27e-07!52;UBERON:0006241!1.27e-07!52;UBERON:0007135!1.27e-07!52;UBERON:0000468!1.29e-07!333;UBERON:0001017!5.98e-07!73;UBERON:0005743!5.98e-07!73 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.05e-08,31;UBERON:0005409,1.52e-08,47;UBERON:0002020,5.69e-08,34;UBERON:0000073,6.17e-08,54;UBERON:0001049,1.55e-07,52;UBERON:0005068,1.55e-07,52;UBERON:0006241,1.55e-07,52;UBERON:0007135,1.55e-07,52;UBERON:0011216,1.84e-07,194;UBERON:0001017,5.97e-07,73 | |||
|phase1_expression=1.44133962394315,5.58360652222978,5.91499011206397,10.8887116070459,7.01254021924886,2.35030980676646,1.40167584357315,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0,2.72138528483423,0,0,1.75991665072747,1.60586496747019,5.7423196411502,2.58457197695445,3.44753972297422,10.8313349090133,7.05684363327806,2.21730510655305,0,0,0,6.35473563452804,7.14808975041517,7.75843553797003,0,0,0,0,0,0,0,0,0,0,1.96222640742402,0.439372365468944,2.13872888981712,0,2.87505128729943,0,0,0,0.514518872071894,0.573066879877513,2.06268836910977,14.7691016427506,11.1088105647127,13.3104594736298,0,0,0,0,0,0,0,4.25127410464758,3.37514845829227,4.20649922702764,13.9968982357864,18.9946945218388,4.77714116938321,4.40889166683887,1.83843757322004,5.50579404996943,9.70423769447427,5.68344173048101,13.58428763621,17.0167017100482,13.5437476344758,7.81712397203867,5.06486349028512,5.19514042441154,17.0884579574727,23.491327331852,24.2319279572891,0.454357159999104,0.68014404096107,4.05810284182349,7.74381489283248,4.0798280022465,11.873470216032,11.695975514058,13.4408066129201,2.52799956237153,0,0,0,4.64783285263046,0,0,0,0.432982082022428,0,0,4.90990682791958,1.29468941823586,1.92974780784272,0.693941307064543,0.913396434936424,1.84492397804847,0.60289056221049,0.705532242814229,1.63366568728578,0.494389935468748,16.9181247596297,0,1.61766849947409,1.32504911076236,1.45462575940567,29.8226817948995,18.1524094147159,24.2958179903608,14.5610521468897,1.1981512450592,0.599902730993408,0.508280908292259,9.43681028250383,2.74500361691176,5.78010019719176,5.04090528557602,5.8814555185976,10.389402227978,7.62533936418461,2.24046600470696,1.24406970610093,1.26361379216837,7.57590681191306,0.390361328888111,1.60931473103431,0.360124259610698,2.86339153887859,3.81004395247436,2.17793324484245,3.46696380870997,10.3481348295606,0,1.32374256117473,4.39877810409872,3.28793598641362,5.28289773528636,4.52727816478817,4.93877127379064,1.59227413454795,0,0,0,0.207125772535502,0.234526059981096,0.180062061461015,0.473489471170421,1.18058539048442,1.54267112887378,2.79040733700489,1.3413670069981,2.33530684734339,1.15191894939436,3.94001913789829,5.10733500138891,2.77779976108131,2.63460138349261,4.42881181909227,2.3131894342054,16.2589287559269,30.0681092515256,2.64450566663544,1.2797295032114,1.39342003116263,5.28356591420583,6.25218926332362,7.56085349072559,8.17970192284004,19.455691523325,7.41145296258049,9.29940272560997,8.75408476981064,8.96834800747953,14.3811105384675,9.07779809473716,13.7407478545513,0.569003702859245,1.25673363870702,0,2.8511185898344,4.46090720485539,4.9095073923223,12.5208343506029,16.0895061297766,11.4609071324204,12.8333050478673,5.33614728756868,0.333690211432188,0.196558995113203,0,1.21716072833102,1.20588579876208,1.52775511068852,2.01387296215567,1.94562272130042,2.74561413188081,11.5014565221884,8.93138274404408,9.04909252032226,10.3557339958316,8.07288360848605,8.68398338454061,0.184753190166605,0,3.09633455239849,3.56464680127895,2.34690248288502,3.51763140627813,1.6663054862021,1.75620283072019,8.35466263762812,13.5093460685753,13.3942005672289,1.63863314715738,2.59027472798843,2.02508682014116,0,0,0.491764273019036,0.551873492609465,8.83028244932856,9.84578167374507,0,2.27223834483936,2.2085575359138,1.17131623288992,4.09304455692318,0.955875191810208,2.22798674082394,1.98153571552183,4.04810701674894,5.55286130031493,3.55759000151871,3.21321316421807,5.67760340833074,0.534196811001766,3.09485222771795,1.31976098378028,0,1.21390318077491,0.906970670894253,0.943025398779491,0.590603785761546,3.3817866273832,4.65170927702798,3.27180356529755,3.20847640546249,2.52829406348653,0,1.03135543248187,0.340439605753788,1.44048875225048,0.776152102696527,1.71469628025274,2.12808280370728,1.42695054081656,1.31639216481697,1.2178597964584,0.469343416127421,0,0.661585194164886,7.25499512942512,3.39075296061402,6.1519183426719,6.80422360817878,9.19189038572343,14.2825609948627,7.78786268444141,0.170870880797853,6.81076664278634,4.44466865687308,0.565105371014073,0.410082683163076,1.14389086603261,0.169978429993855,2.6590775941495,2.07299960706636,3.81868247206045,1.10717597753397,3.86306987541013,4.86024033698106,7.3180903605064,5.45906409365444,10.3845546716312,12.6459787259764,14.6583327511057,55.3455935955956,9.94142900939081,0,1.04661582230785,1.65458490457098,1.55560950675238,1.29159823477731,1.85851738039856,4.92900402312167,2.73429208172295,2.72634295506848,2.17425708743405,1.44015003128933,0.632022241256357,0.608175645870493,0.205421914329655,0.51968329191118,0.358053391334963,0.596044064343795,0,0.147689527174577,0.504832249740738,0,0.302478555410522,0.194915761479505,0.192423683280659,0.116876902181569,5.8949899739955,0.443971906748129,0,0.335769232728157,3.09103350451505,0.93841237725591,3.84618410961257,12.0046292284277,1.00314420807073,6.7770221114048,9.66682996665071,8.02053718815155,10.6548973053086,7.53590771747707,5.2877572817279,8.10027000278167,6.30449684513909,5.43770890781046,7.7664046762773,0.62272408550506,1.19707462020309,2.56100408631201,4.37592090722929,5.8691685535835,7.90527086335061,6.66740183404846,3.7086310303001,6.09746498224449,4.80124702351215,5.83002389747551,6.41329560712659,5.89941497060259,5.89031402124797,5.51380501973887,4.76293691283074,6.60540657885676,5.20854895252004,4.94503080963968,4.26876868389752,5.48590803816665,4.08194354166476,5.24559617884106,5.81385666529314,5.08190654242785,5.4153349050673,5.48783918618318,6.83981249738391,4.6173398707593,4.48913817326191,5.93175090620871,5.61475549540712,4.09231043169689,6.19747364743864,5.01557188550968,5.74564329257276,4.67863216890817,8.16510005383534,6.50380329034067,5.95596831622692,3.47801753430632 | |phase1_expression=1.44133962394315,5.58360652222978,5.91499011206397,10.8887116070459,7.01254021924886,2.35030980676646,1.40167584357315,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0,2.72138528483423,0,0,1.75991665072747,1.60586496747019,5.7423196411502,2.58457197695445,3.44753972297422,10.8313349090133,7.05684363327806,2.21730510655305,0,0,0,6.35473563452804,7.14808975041517,7.75843553797003,0,0,0,0,0,0,0,0,0,0,1.96222640742402,0.439372365468944,2.13872888981712,0,2.87505128729943,0,0,0,0.514518872071894,0.573066879877513,2.06268836910977,14.7691016427506,11.1088105647127,13.3104594736298,0,0,0,0,0,0,0,4.25127410464758,3.37514845829227,4.20649922702764,13.9968982357864,18.9946945218388,4.77714116938321,4.40889166683887,1.83843757322004,5.50579404996943,9.70423769447427,5.68344173048101,13.58428763621,17.0167017100482,13.5437476344758,7.81712397203867,5.06486349028512,5.19514042441154,17.0884579574727,23.491327331852,24.2319279572891,0.454357159999104,0.68014404096107,4.05810284182349,7.74381489283248,4.0798280022465,11.873470216032,11.695975514058,13.4408066129201,2.52799956237153,0,0,0,4.64783285263046,0,0,0,0.432982082022428,0,0,4.90990682791958,1.29468941823586,1.92974780784272,0.693941307064543,0.913396434936424,1.84492397804847,0.60289056221049,0.705532242814229,1.63366568728578,0.494389935468748,16.9181247596297,0,1.61766849947409,1.32504911076236,1.45462575940567,29.8226817948995,18.1524094147159,24.2958179903608,14.5610521468897,1.1981512450592,0.599902730993408,0.508280908292259,9.43681028250383,2.74500361691176,5.78010019719176,5.04090528557602,5.8814555185976,10.389402227978,7.62533936418461,2.24046600470696,1.24406970610093,1.26361379216837,7.57590681191306,0.390361328888111,1.60931473103431,0.360124259610698,2.86339153887859,3.81004395247436,2.17793324484245,3.46696380870997,10.3481348295606,0,1.32374256117473,4.39877810409872,3.28793598641362,5.28289773528636,4.52727816478817,4.93877127379064,1.59227413454795,0,0,0,0.207125772535502,0.234526059981096,0.180062061461015,0.473489471170421,1.18058539048442,1.54267112887378,2.79040733700489,1.3413670069981,2.33530684734339,1.15191894939436,3.94001913789829,5.10733500138891,2.77779976108131,2.63460138349261,4.42881181909227,2.3131894342054,16.2589287559269,30.0681092515256,2.64450566663544,1.2797295032114,1.39342003116263,5.28356591420583,6.25218926332362,7.56085349072559,8.17970192284004,19.455691523325,7.41145296258049,9.29940272560997,8.75408476981064,8.96834800747953,14.3811105384675,9.07779809473716,13.7407478545513,0.569003702859245,1.25673363870702,0,2.8511185898344,4.46090720485539,4.9095073923223,12.5208343506029,16.0895061297766,11.4609071324204,12.8333050478673,5.33614728756868,0.333690211432188,0.196558995113203,0,1.21716072833102,1.20588579876208,1.52775511068852,2.01387296215567,1.94562272130042,2.74561413188081,11.5014565221884,8.93138274404408,9.04909252032226,10.3557339958316,8.07288360848605,8.68398338454061,0.184753190166605,0,3.09633455239849,3.56464680127895,2.34690248288502,3.51763140627813,1.6663054862021,1.75620283072019,8.35466263762812,13.5093460685753,13.3942005672289,1.63863314715738,2.59027472798843,2.02508682014116,0,0,0.491764273019036,0.551873492609465,8.83028244932856,9.84578167374507,0,2.27223834483936,2.2085575359138,1.17131623288992,4.09304455692318,0.955875191810208,2.22798674082394,1.98153571552183,4.04810701674894,5.55286130031493,3.55759000151871,3.21321316421807,5.67760340833074,0.534196811001766,3.09485222771795,1.31976098378028,0,1.21390318077491,0.906970670894253,0.943025398779491,0.590603785761546,3.3817866273832,4.65170927702798,3.27180356529755,3.20847640546249,2.52829406348653,0,1.03135543248187,0.340439605753788,1.44048875225048,0.776152102696527,1.71469628025274,2.12808280370728,1.42695054081656,1.31639216481697,1.2178597964584,0.469343416127421,0,0.661585194164886,7.25499512942512,3.39075296061402,6.1519183426719,6.80422360817878,9.19189038572343,14.2825609948627,7.78786268444141,0.170870880797853,6.81076664278634,4.44466865687308,0.565105371014073,0.410082683163076,1.14389086603261,0.169978429993855,2.6590775941495,2.07299960706636,3.81868247206045,1.10717597753397,3.86306987541013,4.86024033698106,7.3180903605064,5.45906409365444,10.3845546716312,12.6459787259764,14.6583327511057,55.3455935955956,9.94142900939081,0,1.04661582230785,1.65458490457098,1.55560950675238,1.29159823477731,1.85851738039856,4.92900402312167,2.73429208172295,2.72634295506848,2.17425708743405,1.44015003128933,0.632022241256357,0.608175645870493,0.205421914329655,0.51968329191118,0.358053391334963,0.596044064343795,0,0.147689527174577,0.504832249740738,0,0.302478555410522,0.194915761479505,0.192423683280659,0.116876902181569,5.8949899739955,0.443971906748129,0,0.335769232728157,3.09103350451505,0.93841237725591,3.84618410961257,12.0046292284277,1.00314420807073,6.7770221114048,9.66682996665071,8.02053718815155,10.6548973053086,7.53590771747707,5.2877572817279,8.10027000278167,6.30449684513909,5.43770890781046,7.7664046762773,0.62272408550506,1.19707462020309,2.56100408631201,4.37592090722929,5.8691685535835,7.90527086335061,6.66740183404846,3.7086310303001,6.09746498224449,4.80124702351215,5.83002389747551,6.41329560712659,5.89941497060259,5.89031402124797,5.51380501973887,4.76293691283074,6.60540657885676,5.20854895252004,4.94503080963968,4.26876868389752,5.48590803816665,4.08194354166476,5.24559617884106,5.81385666529314,5.08190654242785,5.4153349050673,5.48783918618318,6.83981249738391,4.6173398707593,4.48913817326191,5.93175090620871,5.61475549540712,4.09231043169689,6.19747364743864,5.01557188550968,5.74564329257276,4.67863216890817,8.16510005383534,6.50380329034067,5.95596831622692,3.47801753430632 | ||
|short_description=p1@Rnf152 | |short_description=p1@Rnf152 | ||
}} | }} |
Revision as of 05:55, 15 November 2012
Short description: | p1@Rnf152 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Rnf152_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENSMUST00000058688, ENSMUST00000172299, NM_001160368, NM_178779, uc011wpy.1, uc011wpz.1_5end |
EntrezGene: | Rnf152 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 6.28e-08 | 23 |
neuroblast (sensu Vertebrata) | 6.28e-08 | 23 |
Ontology term | p-value | n |
---|---|---|
intestine | 1.05e-08 | 31 |
gastrointestinal system | 1.52e-08 | 47 |
gray matter | 5.69e-08 | 34 |
regional part of nervous system | 6.17e-08 | 54 |
neural tube | 1.55e-07 | 52 |
neural rod | 1.55e-07 | 52 |
future spinal cord | 1.55e-07 | 52 |
neural keel | 1.55e-07 | 52 |
organ system subdivision | 1.84e-07 | 194 |
central nervous system | 5.97e-07 | 73 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.