FFCP PHASE1:Hg19::chr2:238233399..238233412,-: Difference between revisions
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|ontology_enrichment_celltype=CL:0000055!2.38e-35!180;CL:0000057!4.78e-32!75;CL:0000048!5.60e-19!430;CL:0000723!4.81e-18!436;CL:0000034!7.57e-17!444;CL:0002620!3.20e-15!23;CL:0002320!5.68e-13!365;CL:0000680!3.16e-11!57;CL:0000056!3.16e-11!57;CL:0000355!3.16e-11!57;CL:0002371!1.43e-10!591;CL:0000134!2.48e-10!358;CL:0000183!5.03e-10!59;CL:0000187!5.78e-10!54;CL:0000393!1.49e-08!60;CL:0000211!1.49e-08!60;CL:0000219!2.95e-08!390;CL:0000144!1.05e-07!625;CL:0002570!5.29e-07!8;CL:0000192!7.41e-07!42;CL:0000514!7.41e-07!42 | |ontology_enrichment_celltype=CL:0000055!2.38e-35!180;CL:0000057!4.78e-32!75;CL:0000048!5.60e-19!430;CL:0000723!4.81e-18!436;CL:0000034!7.57e-17!444;CL:0002620!3.20e-15!23;CL:0002320!5.68e-13!365;CL:0000680!3.16e-11!57;CL:0000056!3.16e-11!57;CL:0000355!3.16e-11!57;CL:0002371!1.43e-10!591;CL:0000134!2.48e-10!358;CL:0000183!5.03e-10!59;CL:0000187!5.78e-10!54;CL:0000393!1.49e-08!60;CL:0000211!1.49e-08!60;CL:0000219!2.95e-08!390;CL:0000144!1.05e-07!625;CL:0002570!5.29e-07!8;CL:0000192!7.41e-07!42;CL:0000514!7.41e-07!42 | ||
|ontology_enrichment_celltype_v019=CL:0002570;1.18e-11;8!CL:0000723;5.27e-11;61!CL:0000134;3.64e-10;55!CL:0000048;4.71e-09;58!CL:0000034;5.95e-09;69!CL:0000499;2.39e-08;28!CL:0002620;3.04e-08;23!CL:0002320;9.34e-08;188!CL:0000135;9.03e-07;3!CL:0000388;9.03e-07;3!CL:0002559;9.19e-07;5 | |ontology_enrichment_celltype_v019=CL:0002570;1.18e-11;8!CL:0000723;5.27e-11;61!CL:0000134;3.64e-10;55!CL:0000048;4.71e-09;58!CL:0000034;5.95e-09;69!CL:0000499;2.39e-08;28!CL:0002620;3.04e-08;23!CL:0002320;9.34e-08;188!CL:0000135;9.03e-07;3!CL:0000388;9.03e-07;3!CL:0002559;9.19e-07;5 | ||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.02e-16,76;CL:0002320,2.67e-15,361;CL:0000048,5.49e-14,427;CL:0000723,1.74e-13,433;CL:0000034,7.74e-13,441;CL:0002570,4.91e-12,8;CL:0000134,2.12e-11,354;CL:0000219,2.73e-09,386;CL:0002620,2.69e-08,23;CL:0000499,3.52e-08,28;CL:0002559,8.07e-07,5;CL:0000135,9.33e-07,3;CL:0000388,9.33e-07,3 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:2394!6.03e-09!14 | |ontology_enrichment_disease=DOID:2394!6.03e-09!14 | ||
|ontology_enrichment_disease_v019=DOID:17;4.33e-10;5!DOID:450;4.33e-10;5!DOID:66;4.33e-10;5!DOID:423;4.33e-10;5!DOID:0080000;4.33e-10;5!DOID:11722;4.33e-10;5!DOID:2394;4.13e-07;14 | |ontology_enrichment_disease_v019=DOID:17;4.33e-10;5!DOID:450;4.33e-10;5!DOID:66;4.33e-10;5!DOID:423;4.33e-10;5!DOID:0080000;4.33e-10;5!DOID:11722;4.33e-10;5!DOID:2394;4.13e-07;14 | ||
|ontology_enrichment_disease_v019_2=DOID:17,3.77e-10,5;DOID:450,3.77e-10,5;DOID:66,3.77e-10,5;DOID:423,3.77e-10,5;DOID:0080000,3.77e-10,5;DOID:11722,3.77e-10,5;DOID:2394,6.90e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0000914!8.42e-18!83;UBERON:0002329!8.42e-18!83;UBERON:0003077!8.42e-18!83;UBERON:0003059!8.42e-18!83;UBERON:0007282!8.42e-18!83;UBERON:0009618!8.42e-18!83;UBERON:0007285!8.42e-18!83;UBERON:0003102!3.89e-15!95;UBERON:0004290!7.68e-15!70;UBERON:0002199!2.70e-14!45;UBERON:0002416!2.70e-14!45;UBERON:0002384!2.69e-13!375;UBERON:0000486!4.88e-12!82;UBERON:0002385!1.75e-11!63;UBERON:0001015!1.75e-11!63;UBERON:0000383!1.75e-11!63;UBERON:0001134!2.31e-11!61;UBERON:0002036!2.31e-11!61;UBERON:0003082!2.31e-11!61;UBERON:0005256!3.69e-11!143;UBERON:0002097!1.07e-10!40;UBERON:0001013!6.34e-08!14 | |ontology_enrichment_uberon=UBERON:0000914!8.42e-18!83;UBERON:0002329!8.42e-18!83;UBERON:0003077!8.42e-18!83;UBERON:0003059!8.42e-18!83;UBERON:0007282!8.42e-18!83;UBERON:0009618!8.42e-18!83;UBERON:0007285!8.42e-18!83;UBERON:0003102!3.89e-15!95;UBERON:0004290!7.68e-15!70;UBERON:0002199!2.70e-14!45;UBERON:0002416!2.70e-14!45;UBERON:0002384!2.69e-13!375;UBERON:0000486!4.88e-12!82;UBERON:0002385!1.75e-11!63;UBERON:0001015!1.75e-11!63;UBERON:0000383!1.75e-11!63;UBERON:0001134!2.31e-11!61;UBERON:0002036!2.31e-11!61;UBERON:0003082!2.31e-11!61;UBERON:0005256!3.69e-11!143;UBERON:0002097!1.07e-10!40;UBERON:0001013!6.34e-08!14 | ||
|ontology_enrichment_uberon_v019=UBERON:0001013;2.08e-12;14!UBERON:0002072;1.20e-09;5!UBERON:0002199;2.52e-09;46!UBERON:0002416;2.52e-09;46!UBERON:0011135;2.78e-09;5!UBERON:0002216;2.78e-09;5!UBERON:0011134;2.78e-09;5!UBERON:0002209;2.78e-09;5!UBERON:0002213;2.78e-09;5!UBERON:0007844;2.78e-09;5!UBERON:0011138;2.78e-09;5!UBERON:0001130;2.78e-09;5!UBERON:0001066;2.78e-09;5!UBERON:0001468;2.78e-09;5!UBERON:0003102;1.87e-08;50!UBERON:0002384;1.24e-07;198!UBERON:0002097;7.79e-07;41!UBERON:0007846;9.03e-07;3!UBERON:0000043;9.03e-07;3!UBERON:0007845;9.03e-07;3!UBERON:0002073;9.19e-07;5 | |ontology_enrichment_uberon_v019=UBERON:0001013;2.08e-12;14!UBERON:0002072;1.20e-09;5!UBERON:0002199;2.52e-09;46!UBERON:0002416;2.52e-09;46!UBERON:0011135;2.78e-09;5!UBERON:0002216;2.78e-09;5!UBERON:0011134;2.78e-09;5!UBERON:0002209;2.78e-09;5!UBERON:0002213;2.78e-09;5!UBERON:0007844;2.78e-09;5!UBERON:0011138;2.78e-09;5!UBERON:0001130;2.78e-09;5!UBERON:0001066;2.78e-09;5!UBERON:0001468;2.78e-09;5!UBERON:0003102;1.87e-08;50!UBERON:0002384;1.24e-07;198!UBERON:0002097;7.79e-07;41!UBERON:0007846;9.03e-07;3!UBERON:0000043;9.03e-07;3!UBERON:0007845;9.03e-07;3!UBERON:0002073;9.19e-07;5 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,6.26e-15,371;UBERON:0002199,1.64e-13,46;UBERON:0002416,1.64e-13,46;UBERON:0001013,8.42e-13,14;UBERON:0003102,4.93e-11,99;UBERON:0002072,6.80e-10,5;UBERON:0011135,2.41e-09,5;UBERON:0002216,2.41e-09,5;UBERON:0011134,2.41e-09,5;UBERON:0002209,2.41e-09,5;UBERON:0002213,2.41e-09,5;UBERON:0005856,2.41e-09,5;UBERON:0005866,2.41e-09,5;UBERON:0005863,2.41e-09,5;UBERON:0007844,2.41e-09,5;UBERON:0011138,2.41e-09,5;UBERON:0001130,2.41e-09,5;UBERON:0001066,2.41e-09,5;UBERON:0001468,2.41e-09,5;UBERON:0002097,1.60e-08,41;UBERON:0002073,8.07e-07,5;UBERON:0005086,8.07e-07,5;UBERON:0007846,9.33e-07,3;UBERON:0000043,9.33e-07,3;UBERON:0007845,9.33e-07,3 | |||
|phase1_expression=0.726713517082227,2.5692062866918,0,4.00293193412522,0,0,2.53299878168311,1.89515962028049,2.08948502559871,0,0,0,0,1.98026164736075,1.32558950291166,0.672325146451775,0,1.46062018077475,0.975865597581014,0.369363174230364,0,0,0,0,0.251085279189606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,0.722878304769133,3.50936537445123,1.01392563272577,1.5905718941022,1.45990461090791,0,0.221729397462564,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0.633152558322899,0.264818361626438,6.88407889797153,1.77334191099179,0,0,0.49333509683432,0.311211035399766,1.61652806483626,0.163461903113459,1.66493170409425,1.72852777344,0.937285727335186,1.5608003841516,0.570471821544449,1.49448680551801,0.352303495931295,0.323745888736263,0.280901613404497,1.02077085627447,0.245668634623536,0.826606249406124,2.37600571456411,2.71993622206413,1.82032272387605,0,0.841680569770331,0.500474079487857,0.277064115484183,1.31693286264251,0.919463387397059,0.600952235626387,0.113432183160021,4.84352016359927,2.56268866582281,1.90738711043606,4.50136644126603,1.03052529238439,3.86460810068444,0.744467425326359,2.53164498361899,0.68205903612839,3.02920529092937,0.644349290496095,0.484938170456436,3.55009592516614,0.906768884048762,0.67824236924195,0,0,0,0,0,0,0,0,0,0,2.57296375277154,1.38134921352481,2.78620756819187,4.33127689001751,0,0,0,0,0,0,0,0,0,0,0,1.2347220339942,0,0,0,0,0,0,0,0,0,0,0,1.62904152655162,1.03993478527958,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308482478109971,0,0,0,0.87192013766656,0.4400297149257,0.904902010304444,3.57656445851882,4.22651376278,0.797814349754612,0,1.02882949704857,0,0.266422179016099,1.42977993658148,6.51145926469732,0.823240336780769,0,1.06617584622764,1.58390374586686,0,0,0,0,0,0,0.239624855491583,2.29723871668228,0,1.44781306667579,0.410952645100767,0.358121926479791,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,1.34960640891054,2.50085260529839,2.17012018959788,0.831883446123229,1.07057393278297,0.630809660135739,0.702848489956279,0.300946099727719,0,1.03473071292505,0,0.368738337083406,1.12948698808508,2.15381273209015,1.37257369524342,0,0,0,0,0,0,0.744323423456331,0.460385919864187,1.40330047216537,0.256278298511402,0.511707249066704,0.321707842287215,0,1.69630663182921,2.30830242907065,0.657017248110473,0,1.51073491997947,0,0,0,1.14814448164607,2.73136752010076,2.09799063935079,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0.386682873168488,1.54048617114644,0.614014698904518,0.551346289938122,2.14840489736547,2.0302337147992,1.19317278382541,1.4245125703478,0,0,0,0,0.929691098594572,2.83331112147576,0.6970372701606,0,0,0.869932992075073,0,0.143124886741991,0,0,0,0.767693373934002,4.2793898803392,0.318203247925937,0,0.539617372749944,1.09814811894422,0.471249609382746,0.202182481573316,0,0,0.48763373908959,0.487426979262569,2.11300293513511,0.9554993798559,3.39373036688911,0,0.551365343546124,0,0,1.73632660280006,1.31178950409327,0,0.30982349809975,0,0.573645408816206,0.491245205065606,0,0.354761064070598,0.844430541190656,0.658589785919804,1.51789269506286,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0.23874448473769,0,0,0,0,0,0.16480387422676,0,0,0,0,0,0,1.86623752597084,0,0,0,0.197286811273867,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153900517007594,0,0,0,0,0,0.732780747214898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.40773294189637,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0.52418000472609,0.687944129886466,0,0,0,0.0969890164884194,0,0,0.685209623233754,0,0,0,0,0.426905989478705,0,0,0,0,0,0,0,0,0,1.22397861163586,0,0,0,0,0,0,0.837847203816763,0,0,0.199679000498991,0,0,0.0671834724867263,1.80149941771202,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.542999601753713,1.72844298240254,3.5924609612035,0,0,0.511164065356265,0,0,0,0,0,0,0,0.213574825135389,0,0,0.496166021811951,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.705797459094515,0,0,1.64180283175561,2.80455971816669,1.66441758450784,2.84104507912634,5.53449383855665,3.55924488638614,0.457680136793847,1.66354016139563,0.932623203496683,0.887130899937803,1.27437413730962,0.899606224327209,1.08684069813382,1.24411862352257,3.98762571836992,1.04349012362347,0.150257608997218,0.761610424337591,1.22061219961398,1.63663793282303,0.537052785212442,0.464033759878494,2.78667122089031,0,2.74716564146234,2.69399591012735,0,0,0,0,0,1.15761237161917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327609848846413,0,0,0,0,0,0,0.368211900503681,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,1.41070377476274,3.6749457282384,0,0,0,0,0,0,0,0,0,0,0,0,2.288292572803,0,0.198916222116275,0.0752103283492573,1.0085253435176,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0.0887023701626388,0,1.8863681038116,0,0,0,0.111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| ||
|short_description=p@chr2:238233399..238233412,- | |short_description=p@chr2:238233399..238233412,- | ||
}} | }} |
Revision as of 22:38, 15 November 2012
Short description: | p@chr2:238233399..238233412, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr2:238233399..238233412, - |
Coexpression cluster: | C332_Fibroblast_Smooth_Mesenchymal_mesenchymal_Chondrocyte_Skeletal_Pericytes |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.02e-16 | 76 |
connective tissue cell | 2.67e-15 | 361 |
multi fate stem cell | 5.49e-14 | 427 |
somatic stem cell | 1.74e-13 | 433 |
stem cell | 7.74e-13 | 441 |
mesenchymal stem cell of adipose | 4.91e-12 | 8 |
mesenchymal cell | 2.12e-11 | 354 |
motile cell | 2.73e-09 | 386 |
skin fibroblast | 2.69e-08 | 23 |
stromal cell | 3.52e-08 | 28 |
hair follicle cell | 8.07e-07 | 5 |
fibrocyte | 9.33e-07 | 3 |
tendon cell | 9.33e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 6.26e-15 | 371 |
integument | 1.64e-13 | 46 |
integumental system | 1.64e-13 | 46 |
adipose tissue | 8.42e-13 | 14 |
surface structure | 4.93e-11 | 99 |
hypodermis | 6.80e-10 | 5 |
intervertebral cartilage | 2.41e-09 | 5 |
symphysis | 2.41e-09 | 5 |
nonsynovial joint | 2.41e-09 | 5 |
fibrous joint | 2.41e-09 | 5 |
cartilaginous joint | 2.41e-09 | 5 |
developing mesenchymal condensation | 2.41e-09 | 5 |
pre-cartilage condensation | 2.41e-09 | 5 |
cartilaginous condensation | 2.41e-09 | 5 |
cartilage element | 2.41e-09 | 5 |
post-cranial axial skeletal system | 2.41e-09 | 5 |
vertebral column | 2.41e-09 | 5 |
intervertebral disk | 2.41e-09 | 5 |
intervertebral joint | 2.41e-09 | 5 |
skin of body | 1.60e-08 | 41 |
hair follicle | 8.07e-07 | 5 |
hair follicle placode | 8.07e-07 | 5 |
dense regular connective tissue | 9.33e-07 | 3 |
tendon | 9.33e-07 | 3 |
regular connective tissue | 9.33e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 3.77e-10 | 5 |
myotonic disease | 3.77e-10 | 5 |
muscle tissue disease | 3.77e-10 | 5 |
myopathy | 3.77e-10 | 5 |
muscular disease | 3.77e-10 | 5 |
myotonic dystrophy | 3.77e-10 | 5 |
ovarian cancer | 6.90e-07 | 14 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.