FFCP PHASE1:Hg19::chr2:158114516..158114531,+: Difference between revisions
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|ontology_enrichment_celltype=CL:0000055!2.70e-21!180;CL:0000057!7.92e-13!75;CL:0000680!1.85e-08!57;CL:0000056!1.85e-08!57;CL:0000355!1.85e-08!57;CL:0000359!2.00e-08!32;CL:0002620!2.55e-08!23;CL:0002371!5.33e-08!591;CL:0000192!1.16e-07!42;CL:0000514!1.16e-07!42;CL:0000187!2.58e-07!54 | |ontology_enrichment_celltype=CL:0000055!2.70e-21!180;CL:0000057!7.92e-13!75;CL:0000680!1.85e-08!57;CL:0000056!1.85e-08!57;CL:0000355!1.85e-08!57;CL:0000359!2.00e-08!32;CL:0002620!2.55e-08!23;CL:0002371!5.33e-08!591;CL:0000192!1.16e-07!42;CL:0000514!1.16e-07!42;CL:0000187!2.58e-07!54 | ||
|ontology_enrichment_celltype_v019=CL:0002620;1.64e-13;23 | |ontology_enrichment_celltype_v019=CL:0002620;1.64e-13;23 | ||
|ontology_enrichment_celltype_v019_2=CL:0000057,3.71e-15,76;CL:0002620,1.47e-13,23 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:17;1.15e-08;5!DOID:450;1.15e-08;5!DOID:66;1.15e-08;5!DOID:423;1.15e-08;5!DOID:0080000;1.15e-08;5!DOID:11722;1.15e-08;5 | |ontology_enrichment_disease_v019=DOID:17;1.15e-08;5!DOID:450;1.15e-08;5!DOID:66;1.15e-08;5!DOID:423;1.15e-08;5!DOID:0080000;1.15e-08;5!DOID:11722;1.15e-08;5 | ||
|ontology_enrichment_disease_v019_2=DOID:17,1.20e-08,5;DOID:450,1.20e-08,5;DOID:66,1.20e-08,5;DOID:423,1.20e-08,5;DOID:0080000,1.20e-08,5;DOID:11722,1.20e-08,5 | |||
|ontology_enrichment_uberon=UBERON:0003102!1.14e-13!95;UBERON:0000475!9.50e-10!365;UBERON:0000914!1.02e-09!83;UBERON:0002329!1.02e-09!83;UBERON:0003077!1.02e-09!83;UBERON:0003059!1.02e-09!83;UBERON:0007282!1.02e-09!83;UBERON:0009618!1.02e-09!83;UBERON:0007285!1.02e-09!83;UBERON:0002097!3.41e-09!40;UBERON:0002199!1.05e-08!45;UBERON:0002416!1.05e-08!45;UBERON:0000486!2.40e-08!82;UBERON:0001134!3.37e-07!61;UBERON:0002036!3.37e-07!61;UBERON:0003082!3.37e-07!61;UBERON:0000165!4.71e-07!28;UBERON:0000930!4.71e-07!28;UBERON:0000481!9.33e-07!347 | |ontology_enrichment_uberon=UBERON:0003102!1.14e-13!95;UBERON:0000475!9.50e-10!365;UBERON:0000914!1.02e-09!83;UBERON:0002329!1.02e-09!83;UBERON:0003077!1.02e-09!83;UBERON:0003059!1.02e-09!83;UBERON:0007282!1.02e-09!83;UBERON:0009618!1.02e-09!83;UBERON:0007285!1.02e-09!83;UBERON:0002097!3.41e-09!40;UBERON:0002199!1.05e-08!45;UBERON:0002416!1.05e-08!45;UBERON:0000486!2.40e-08!82;UBERON:0001134!3.37e-07!61;UBERON:0002036!3.37e-07!61;UBERON:0003082!3.37e-07!61;UBERON:0000165!4.71e-07!28;UBERON:0000930!4.71e-07!28;UBERON:0000481!9.33e-07!347 | ||
|ontology_enrichment_uberon_v019=UBERON:0000075;1.77e-10;16!UBERON:0002097;8.40e-10;41!UBERON:0002199;2.72e-09;46!UBERON:0002416;2.72e-09;46!UBERON:0011135;3.30e-09;5!UBERON:0002216;3.30e-09;5!UBERON:0011134;3.30e-09;5!UBERON:0002209;3.30e-09;5!UBERON:0002213;3.30e-09;5!UBERON:0007844;3.30e-09;5!UBERON:0011138;3.30e-09;5!UBERON:0001130;3.30e-09;5!UBERON:0001066;3.30e-09;5!UBERON:0001468;3.30e-09;5!UBERON:0001828;9.71e-07;8 | |ontology_enrichment_uberon_v019=UBERON:0000075;1.77e-10;16!UBERON:0002097;8.40e-10;41!UBERON:0002199;2.72e-09;46!UBERON:0002416;2.72e-09;46!UBERON:0011135;3.30e-09;5!UBERON:0002216;3.30e-09;5!UBERON:0011134;3.30e-09;5!UBERON:0002209;3.30e-09;5!UBERON:0002213;3.30e-09;5!UBERON:0007844;3.30e-09;5!UBERON:0011138;3.30e-09;5!UBERON:0001130;3.30e-09;5!UBERON:0001066;3.30e-09;5!UBERON:0001468;3.30e-09;5!UBERON:0001828;9.71e-07;8 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0003102,7.82e-14,99;UBERON:0002097,1.25e-12,41;UBERON:0002199,5.57e-12,46;UBERON:0002416,5.57e-12,46;UBERON:0000075,1.69e-10,16;UBERON:0011135,2.81e-09,5;UBERON:0002216,2.81e-09,5;UBERON:0011134,2.81e-09,5;UBERON:0002209,2.81e-09,5;UBERON:0002213,2.81e-09,5;UBERON:0005856,2.81e-09,5;UBERON:0005866,2.81e-09,5;UBERON:0005863,2.81e-09,5;UBERON:0007844,2.81e-09,5;UBERON:0011138,2.81e-09,5;UBERON:0001130,2.81e-09,5;UBERON:0001066,2.81e-09,5;UBERON:0001468,2.81e-09,5;UBERON:0011137,5.74e-08,14;UBERON:0000165,3.66e-07,29;UBERON:0000930,3.66e-07,29;UBERON:0001828,7.86e-07,8 | |||
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| ||
|short_description=p4@GALNT5 | |short_description=p4@GALNT5 | ||
}} | }} |
Revision as of 06:03, 16 November 2012
Short description: | p4@GALNT5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_GALNT5_5end |
Coexpression cluster: | C1496_Fibroblast_Smooth_papillotubular_basal_liposarcoma_tenocyte_mesenchymal |
Association with transcript: | 176bp_to_NM_014568, uc002tzg.2, uc010zci.1_5end |
EntrezGene: | GALNT5 |
HGNC: | 4127 |
UniProt: | A5PKZ1Q7Z7M9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 3.71e-15 | 76 |
skin fibroblast | 1.47e-13 | 23 |
Ontology term | p-value | n |
---|---|---|
surface structure | 7.82e-14 | 99 |
skin of body | 1.25e-12 | 41 |
integument | 5.57e-12 | 46 |
integumental system | 5.57e-12 | 46 |
subdivision of skeletal system | 1.69e-10 | 16 |
intervertebral cartilage | 2.81e-09 | 5 |
symphysis | 2.81e-09 | 5 |
nonsynovial joint | 2.81e-09 | 5 |
fibrous joint | 2.81e-09 | 5 |
cartilaginous joint | 2.81e-09 | 5 |
developing mesenchymal condensation | 2.81e-09 | 5 |
pre-cartilage condensation | 2.81e-09 | 5 |
cartilaginous condensation | 2.81e-09 | 5 |
cartilage element | 2.81e-09 | 5 |
post-cranial axial skeletal system | 2.81e-09 | 5 |
vertebral column | 2.81e-09 | 5 |
intervertebral disk | 2.81e-09 | 5 |
intervertebral joint | 2.81e-09 | 5 |
axial skeletal system | 5.74e-08 | 14 |
mouth | 3.66e-07 | 29 |
stomodeum | 3.66e-07 | 29 |
gingiva | 7.86e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 1.20e-08 | 5 |
myotonic disease | 1.20e-08 | 5 |
muscle tissue disease | 1.20e-08 | 5 |
myopathy | 1.20e-08 | 5 |
muscular disease | 1.20e-08 | 5 |
myotonic dystrophy | 1.20e-08 | 5 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.