FFCP PHASE1:Hg19::chr10:73472428..73472437,+: Difference between revisions
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|ontology_enrichment_celltype=CL:0000625!2.35e-13!11;CL:0000791!3.12e-08!18;CL:0000789!3.12e-08!18;CL:0002420!3.12e-08!18;CL:0002419!3.12e-08!18;CL:0000790!3.12e-08!18 | |ontology_enrichment_celltype=CL:0000625!2.35e-13!11;CL:0000791!3.12e-08!18;CL:0000789!3.12e-08!18;CL:0002420!3.12e-08!18;CL:0002419!3.12e-08!18;CL:0000790!3.12e-08!18 | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:630!1.30e-10!1;DOID:0050177!1.30e-10!1;DOID:0050427!1.30e-10!1 | |ontology_enrichment_disease=DOID:630!1.30e-10!1;DOID:0050177!1.30e-10!1;DOID:0050427!1.30e-10!1 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004177!1.83e-12!7;UBERON:0002171!1.19e-10!1;UBERON:0006518!1.19e-10!1;UBERON:0008949!1.19e-10!1;UBERON:0000101!1.19e-10!1;UBERON:0002167!1.19e-10!1;UBERON:0002370!1.81e-10!4;UBERON:0005058!1.81e-10!4;UBERON:0009113!1.81e-10!4;UBERON:0003295!1.81e-10!4;UBERON:0005562!1.81e-10!4;UBERON:0002372!4.33e-10!1;UBERON:0001961!4.33e-10!1;UBERON:0001744!4.33e-10!1;UBERON:0001735!4.33e-10!1;UBERON:0000974!5.23e-09!10;UBERON:0001042!6.86e-09!10;UBERON:0009145!6.86e-09!10;UBERON:0006562!3.99e-08!11;UBERON:0003351!2.95e-07!6 | |ontology_enrichment_uberon=UBERON:0004177!1.83e-12!7;UBERON:0002171!1.19e-10!1;UBERON:0006518!1.19e-10!1;UBERON:0008949!1.19e-10!1;UBERON:0000101!1.19e-10!1;UBERON:0002167!1.19e-10!1;UBERON:0002370!1.81e-10!4;UBERON:0005058!1.81e-10!4;UBERON:0009113!1.81e-10!4;UBERON:0003295!1.81e-10!4;UBERON:0005562!1.81e-10!4;UBERON:0002372!4.33e-10!1;UBERON:0001961!4.33e-10!1;UBERON:0001744!4.33e-10!1;UBERON:0001735!4.33e-10!1;UBERON:0000974!5.23e-09!10;UBERON:0001042!6.86e-09!10;UBERON:0009145!6.86e-09!10;UBERON:0006562!3.99e-08!11;UBERON:0003351!2.95e-07!6 | ||
|ontology_enrichment_uberon_v019=UBERON:0002370;4.61e-131;2!UBERON:0005058;4.61e-131;2!UBERON:0009113;4.61e-131;2!UBERON:0004177;2.19e-53;5!UBERON:0005057;2.19e-53;5!UBERON:0000077;6.25e-11;27!UBERON:0002405;6.25e-11;27!UBERON:0002390;2.43e-07;32!UBERON:0002368;2.43e-07;33 | |ontology_enrichment_uberon_v019=UBERON:0002370;4.61e-131;2!UBERON:0005058;4.61e-131;2!UBERON:0009113;4.61e-131;2!UBERON:0004177;2.19e-53;5!UBERON:0005057;2.19e-53;5!UBERON:0000077;6.25e-11;27!UBERON:0002405;6.25e-11;27!UBERON:0002390;2.43e-07;32!UBERON:0002368;2.43e-07;33 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,2.40e-66,4;UBERON:0005058,2.40e-66,4;UBERON:0009113,2.40e-66,4;UBERON:0003295,2.40e-66,4;UBERON:0005562,2.40e-66,4;UBERON:0003351,9.76e-45,6;UBERON:0004177,1.49e-38,7;UBERON:0005057,1.49e-38,7;UBERON:0000974,2.08e-27,10;UBERON:0003408,2.08e-27,10;UBERON:0001042,2.08e-27,10;UBERON:0009145,2.08e-27,10;UBERON:0006562,4.86e-25,11;UBERON:0009722,4.86e-25,11;UBERON:0007690,4.86e-25,11;UBERON:0008814,8.40e-16,18;UBERON:0001557,4.91e-15,19;UBERON:0004807,1.40e-10,28;UBERON:0000077,2.96e-10,29;UBERON:0002368,1.09e-08,35;UBERON:0000949,5.42e-07,45;UBERON:0000072,9.72e-07,47 | |||
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|short_description=p3@CDH23 | |short_description=p3@CDH23 | ||
}} | }} |
Revision as of 00:48, 17 November 2012
Short description: | p3@CDH23 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_CDH23_5end |
Coexpression cluster: | C28_thymus_acute_vein_Hodgkin_chronic_throat_Dendritic |
Association with transcript: | 67bp_to_ENST00000398792, ENST00000493280, uc001jsc.1_5end |
EntrezGene: | 100653137,64072 |
HGNC: | 13733 |
UniProt: | E7ERT0Q8N1Z7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
thymus | 2.40e-66 | 4 |
hemolymphoid system gland | 2.40e-66 | 4 |
thymic region | 2.40e-66 | 4 |
pharyngeal gland | 2.40e-66 | 4 |
thymus primordium | 2.40e-66 | 4 |
pharyngeal epithelium | 9.76e-45 | 6 |
hemopoietic organ | 1.49e-38 | 7 |
immune organ | 1.49e-38 | 7 |
neck | 2.08e-27 | 10 |
gland of gut | 2.08e-27 | 10 |
chordate pharynx | 2.08e-27 | 10 |
pharyngeal region of foregut | 2.08e-27 | 10 |
pharynx | 4.86e-25 | 11 |
entire pharyngeal arch endoderm | 4.86e-25 | 11 |
early pharyngeal endoderm | 4.86e-25 | 11 |
pharyngeal arch system | 8.40e-16 | 18 |
upper respiratory tract | 4.91e-15 | 19 |
respiratory system epithelium | 1.40e-10 | 28 |
mixed endoderm/mesoderm-derived structure | 2.96e-10 | 29 |
endocrine gland | 1.09e-08 | 35 |
endocrine system | 5.42e-07 | 45 |
segment of respiratory tract | 9.72e-07 | 47 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.