FFCP PHASE1:Hg19::chr5:139492456..139492489,+: Difference between revisions
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|ontology_enrichment_celltype=CL:0000055!6.20e-33!180;CL:0000057!8.25e-26!75;CL:0000359!2.04e-13!32;CL:0000680!3.11e-13!57;CL:0000056!3.11e-13!57;CL:0000355!3.11e-13!57;CL:0000192!1.46e-12!42;CL:0000514!1.46e-12!42;CL:0000187!1.84e-12!54;CL:0000222!1.45e-11!119;CL:0000183!1.90e-11!59;CL:0002620!1.70e-10!23;CL:0002334!3.61e-10!12;CL:0000393!7.98e-10!60;CL:0000211!7.98e-10!60;CL:0000077!1.58e-08!19;CL:0000144!2.56e-08!625;CL:0002539!9.50e-08!10;CL:0000220!1.31e-07!246;CL:0002321!2.48e-07!248;CL:0000548!5.24e-07!679;CL:0000004!5.24e-07!679;CL:0000255!5.24e-07!679 | |ontology_enrichment_celltype=CL:0000055!6.20e-33!180;CL:0000057!8.25e-26!75;CL:0000359!2.04e-13!32;CL:0000680!3.11e-13!57;CL:0000056!3.11e-13!57;CL:0000355!3.11e-13!57;CL:0000192!1.46e-12!42;CL:0000514!1.46e-12!42;CL:0000187!1.84e-12!54;CL:0000222!1.45e-11!119;CL:0000183!1.90e-11!59;CL:0002620!1.70e-10!23;CL:0002334!3.61e-10!12;CL:0000393!7.98e-10!60;CL:0000211!7.98e-10!60;CL:0000077!1.58e-08!19;CL:0000144!2.56e-08!625;CL:0002539!9.50e-08!10;CL:0000220!1.31e-07!246;CL:0002321!2.48e-07!248;CL:0000548!5.24e-07!679;CL:0000004!5.24e-07!679;CL:0000255!5.24e-07!679 | ||
|ontology_enrichment_celltype_v019=CL:0002334;8.30e-16;12!CL:0000057;8.66e-15;73!CL:0002620;1.01e-12;23!CL:0000077;9.49e-11;19!CL:0000359;1.65e-10;32!CL:0002539;7.13e-10;10!CL:0002320;1.97e-07;188 | |ontology_enrichment_celltype_v019=CL:0002334;8.30e-16;12!CL:0000057;8.66e-15;73!CL:0002620;1.01e-12;23!CL:0000077;9.49e-11;19!CL:0000359;1.65e-10;32!CL:0002539;7.13e-10;10!CL:0002320;1.97e-07;188 | ||
|ontology_enrichment_celltype_v019_2=CL:0000057,3.53e-33,76;CL:0002334,5.07e-16,12;CL:0002620,4.01e-13,23;CL:0000048,5.79e-11,427;CL:0000077,1.16e-10,19;CL:0000359,1.61e-10,32;CL:0000723,1.94e-10,433;CL:0002539,4.68e-10,10;CL:0000034,9.09e-10,441;CL:0000192,3.65e-08,43;CL:0000514,3.65e-08,43;CL:0000187,8.60e-07,55;CL:0000134,8.67e-07,354 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:2394!4.30e-08!14 | |ontology_enrichment_disease=DOID:2394!4.30e-08!14 | ||
|ontology_enrichment_disease_v019=DOID:2394;4.65e-09;14 | |ontology_enrichment_disease_v019=DOID:2394;4.65e-09;14 | ||
|ontology_enrichment_disease_v019_2=DOID:2394,1.21e-08,14 | |||
|ontology_enrichment_uberon=UBERON:0000914!1.52e-16!83;UBERON:0002329!1.52e-16!83;UBERON:0003077!1.52e-16!83;UBERON:0003059!1.52e-16!83;UBERON:0007282!1.52e-16!83;UBERON:0009618!1.52e-16!83;UBERON:0007285!1.52e-16!83;UBERON:0004290!2.09e-13!70;UBERON:0005256!6.68e-13!143;UBERON:0001637!1.20e-12!42;UBERON:0003509!1.20e-12!42;UBERON:0004572!1.20e-12!42;UBERON:0000486!2.27e-12!82;UBERON:0003102!1.07e-11!95;UBERON:0004872!1.91e-11!84;UBERON:0001134!2.24e-11!61;UBERON:0002036!2.24e-11!61;UBERON:0003082!2.24e-11!61;UBERON:0002100!7.25e-11!216;UBERON:0004573!1.17e-10!33;UBERON:0004571!1.17e-10!33;UBERON:0002385!1.49e-10!63;UBERON:0001015!1.49e-10!63;UBERON:0000383!1.49e-10!63;UBERON:0002097!7.96e-10!40;UBERON:0002199!1.71e-09!45;UBERON:0002416!1.71e-09!45;UBERON:0001981!3.19e-09!60;UBERON:0007500!3.19e-09!60;UBERON:0004537!3.19e-09!60;UBERON:0006965!3.19e-09!60;UBERON:0000475!3.02e-08!365;UBERON:0003914!8.87e-08!118;UBERON:0004237!9.50e-08!10;UBERON:0004695!9.50e-08!10;UBERON:0002111!9.50e-08!10;UBERON:0004178!9.50e-08!10;UBERON:0000947!1.20e-07!21;UBERON:0010191!1.20e-07!21;UBERON:0000055!1.62e-07!69;UBERON:0002049!3.38e-07!79;UBERON:0007798!3.38e-07!79 | |ontology_enrichment_uberon=UBERON:0000914!1.52e-16!83;UBERON:0002329!1.52e-16!83;UBERON:0003077!1.52e-16!83;UBERON:0003059!1.52e-16!83;UBERON:0007282!1.52e-16!83;UBERON:0009618!1.52e-16!83;UBERON:0007285!1.52e-16!83;UBERON:0004290!2.09e-13!70;UBERON:0005256!6.68e-13!143;UBERON:0001637!1.20e-12!42;UBERON:0003509!1.20e-12!42;UBERON:0004572!1.20e-12!42;UBERON:0000486!2.27e-12!82;UBERON:0003102!1.07e-11!95;UBERON:0004872!1.91e-11!84;UBERON:0001134!2.24e-11!61;UBERON:0002036!2.24e-11!61;UBERON:0003082!2.24e-11!61;UBERON:0002100!7.25e-11!216;UBERON:0004573!1.17e-10!33;UBERON:0004571!1.17e-10!33;UBERON:0002385!1.49e-10!63;UBERON:0001015!1.49e-10!63;UBERON:0000383!1.49e-10!63;UBERON:0002097!7.96e-10!40;UBERON:0002199!1.71e-09!45;UBERON:0002416!1.71e-09!45;UBERON:0001981!3.19e-09!60;UBERON:0007500!3.19e-09!60;UBERON:0004537!3.19e-09!60;UBERON:0006965!3.19e-09!60;UBERON:0000475!3.02e-08!365;UBERON:0003914!8.87e-08!118;UBERON:0004237!9.50e-08!10;UBERON:0004695!9.50e-08!10;UBERON:0002111!9.50e-08!10;UBERON:0004178!9.50e-08!10;UBERON:0000947!1.20e-07!21;UBERON:0010191!1.20e-07!21;UBERON:0000055!1.62e-07!69;UBERON:0002049!3.38e-07!79;UBERON:0007798!3.38e-07!79 | ||
|ontology_enrichment_uberon_v019=UBERON:0000947;7.30e-12;21!UBERON:0010191;7.30e-12;21!UBERON:0004237;7.13e-10;10!UBERON:0004695;7.13e-10;10!UBERON:0002111;7.13e-10;10!UBERON:0004178;7.13e-10;10!UBERON:0004573;8.41e-10;33!UBERON:0004571;8.41e-10;33!UBERON:0001637;1.77e-09;42!UBERON:0003509;1.77e-09;42!UBERON:0004572;1.77e-09;42!UBERON:0002097;1.88e-08;41!UBERON:0002199;5.06e-07;46!UBERON:0002416;5.06e-07;46!UBERON:0003688;7.10e-07;6!UBERON:0002358;7.10e-07;6!UBERON:0003684;7.10e-07;6!UBERON:0001178;7.10e-07;6 | |ontology_enrichment_uberon_v019=UBERON:0000947;7.30e-12;21!UBERON:0010191;7.30e-12;21!UBERON:0004237;7.13e-10;10!UBERON:0004695;7.13e-10;10!UBERON:0002111;7.13e-10;10!UBERON:0004178;7.13e-10;10!UBERON:0004573;8.41e-10;33!UBERON:0004571;8.41e-10;33!UBERON:0001637;1.77e-09;42!UBERON:0003509;1.77e-09;42!UBERON:0004572;1.77e-09;42!UBERON:0002097;1.88e-08;41!UBERON:0002199;5.06e-07;46!UBERON:0002416;5.06e-07;46!UBERON:0003688;7.10e-07;6!UBERON:0002358;7.10e-07;6!UBERON:0003684;7.10e-07;6!UBERON:0001178;7.10e-07;6 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001637,1.13e-13,42;UBERON:0003509,1.13e-13,42;UBERON:0004572,1.13e-13,42;UBERON:0000947,4.97e-12,21;UBERON:0010191,4.97e-12,21;UBERON:0004573,9.05e-11,33;UBERON:0004571,9.05e-11,33;UBERON:0002199,1.57e-10,46;UBERON:0002416,1.57e-10,46;UBERON:0002097,4.31e-10,41;UBERON:0004237,4.68e-10,10;UBERON:0004695,4.68e-10,10;UBERON:0002111,4.68e-10,10;UBERON:0004178,4.68e-10,10;UBERON:0003102,5.35e-09,99;UBERON:0004872,3.77e-08,83;UBERON:0007500,9.53e-08,59;UBERON:0001981,9.53e-08,59;UBERON:0004537,9.53e-08,59;UBERON:0006965,9.53e-08,59;UBERON:0002329,1.76e-07,71;UBERON:0003059,1.76e-07,71;UBERON:0007282,1.76e-07,71;UBERON:0004290,1.76e-07,71;UBERON:0009618,1.76e-07,71;UBERON:0003077,2.80e-07,72;UBERON:0007285,2.80e-07,72;UBERON:0007524,4.37e-07,73;UBERON:0003688,8.91e-07,6;UBERON:0002358,8.91e-07,6;UBERON:0003684,8.91e-07,6;UBERON:0001178,8.91e-07,6 | |||
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| ||
|short_description=p7@PURA | |short_description=p7@PURA | ||
}} | }} |
Revision as of 23:18, 18 November 2012
Short description: | p7@PURA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_PURA_5end |
Coexpression cluster: | NA |
Association with transcript: | -23bp_to_ENST00000502351_5end |
EntrezGene: | PURA |
HGNC: | 9701 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 3.53e-33 | 76 |
preadipocyte | 5.07e-16 | 12 |
skin fibroblast | 4.01e-13 | 23 |
multi fate stem cell | 5.79e-11 | 427 |
mesothelial cell | 1.16e-10 | 19 |
vascular associated smooth muscle cell | 1.61e-10 | 32 |
somatic stem cell | 1.94e-10 | 433 |
aortic smooth muscle cell | 4.68e-10 | 10 |
stem cell | 9.09e-10 | 441 |
smooth muscle cell | 3.65e-08 | 43 |
smooth muscle myoblast | 3.65e-08 | 43 |
muscle cell | 8.60e-07 | 55 |
mesenchymal cell | 8.67e-07 | 354 |
Ontology term | p-value | n |
---|---|---|
artery | 1.13e-13 | 42 |
arterial blood vessel | 1.13e-13 | 42 |
arterial system | 1.13e-13 | 42 |
aorta | 4.97e-12 | 21 |
aortic system | 4.97e-12 | 21 |
systemic artery | 9.05e-11 | 33 |
systemic arterial system | 9.05e-11 | 33 |
integument | 1.57e-10 | 46 |
integumental system | 1.57e-10 | 46 |
skin of body | 4.31e-10 | 41 |
blood vessel smooth muscle | 4.68e-10 | 10 |
arterial system smooth muscle | 4.68e-10 | 10 |
artery smooth muscle tissue | 4.68e-10 | 10 |
aorta smooth muscle tissue | 4.68e-10 | 10 |
surface structure | 5.35e-09 | 99 |
splanchnic layer of lateral plate mesoderm | 3.77e-08 | 83 |
epithelial tube open at both ends | 9.53e-08 | 59 |
blood vessel | 9.53e-08 | 59 |
blood vasculature | 9.53e-08 | 59 |
vascular cord | 9.53e-08 | 59 |
somite | 1.76e-07 | 71 |
presomitic mesoderm | 1.76e-07 | 71 |
presumptive segmental plate | 1.76e-07 | 71 |
dermomyotome | 1.76e-07 | 71 |
trunk paraxial mesoderm | 1.76e-07 | 71 |
paraxial mesoderm | 2.80e-07 | 72 |
presumptive paraxial mesoderm | 2.80e-07 | 72 |
dense mesenchyme tissue | 4.37e-07 | 73 |
omentum | 8.91e-07 | 6 |
peritoneum | 8.91e-07 | 6 |
abdominal cavity | 8.91e-07 | 6 |
visceral peritoneum | 8.91e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 1.21e-08 | 14 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.