FFCP PHASE1:Hg19::chr22:39898242..39898277,+: Difference between revisions
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|ontology_enrichment_celltype=CL:0002139!3.09e-10!24;CL:0000071!2.96e-08!18;CL:0002546!2.96e-08!18;CL:0000115!4.86e-08!35;CL:0000222!1.59e-07!119;CL:0002078!2.56e-07!44;CL:0000076!4.30e-07!62;CL:0000220!6.40e-07!246 | |ontology_enrichment_celltype=CL:0002139!3.09e-10!24;CL:0000071!2.96e-08!18;CL:0002546!2.96e-08!18;CL:0000115!4.86e-08!35;CL:0000222!1.59e-07!119;CL:0002078!2.56e-07!44;CL:0000076!4.30e-07!62;CL:0000220!6.40e-07!246 | ||
|ontology_enrichment_celltype_v019=CL:0002139;4.65e-11;24!CL:0000071;2.51e-09;18!CL:0000115;8.45e-09;36!CL:1000413;2.22e-07;9 | |ontology_enrichment_celltype_v019=CL:0002139;4.65e-11;24!CL:0000071;2.51e-09;18!CL:0000115;8.45e-09;36!CL:1000413;2.22e-07;9 | ||
|ontology_enrichment_celltype_v019_2=CL:0002139,3.49e-12,24;CL:0000115,3.00e-11,36;CL:0002078,1.97e-10,45;CL:0000071,2.44e-10,18;CL:0002546,2.44e-10,18;CL:1000413,2.02e-08,9;CL:0000213,2.47e-08,58;CL:0000215,2.47e-08,58;CL:0000222,4.20e-07,121 | |||
|ontology_enrichment_development_v019=CL:0002546;2.51e-09;18 | |ontology_enrichment_development_v019=CL:0002546;2.51e-09;18 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000055!5.72e-10!69;UBERON:0002049!2.67e-09!79;UBERON:0007798!2.67e-09!79;UBERON:0001986!2.96e-08!18;UBERON:0004638!2.96e-08!18;UBERON:0004852!2.96e-08!18;UBERON:0000487!9.26e-08!22;UBERON:0004872!1.26e-07!84;UBERON:0001981!2.21e-07!60;UBERON:0007500!2.21e-07!60;UBERON:0004537!2.21e-07!60;UBERON:0006965!2.21e-07!60;UBERON:0006914!3.56e-07!25;UBERON:0000119!9.32e-07!312 | |ontology_enrichment_uberon=UBERON:0000055!5.72e-10!69;UBERON:0002049!2.67e-09!79;UBERON:0007798!2.67e-09!79;UBERON:0001986!2.96e-08!18;UBERON:0004638!2.96e-08!18;UBERON:0004852!2.96e-08!18;UBERON:0000487!9.26e-08!22;UBERON:0004872!1.26e-07!84;UBERON:0001981!2.21e-07!60;UBERON:0007500!2.21e-07!60;UBERON:0004537!2.21e-07!60;UBERON:0006965!2.21e-07!60;UBERON:0006914!3.56e-07!25;UBERON:0000119!9.32e-07!312 | ||
|ontology_enrichment_uberon_v019=UBERON:0004638;2.51e-09;18!UBERON:0001986;2.51e-09;18!UBERON:0004852;2.51e-09;18!UBERON:0000487;3.54e-09;22!UBERON:0006914;1.37e-08;25!UBERON:0003915;2.22e-07;9!UBERON:0004700;2.22e-07;9!UBERON:0001917;2.22e-07;9 | |ontology_enrichment_uberon_v019=UBERON:0004638;2.51e-09;18!UBERON:0001986;2.51e-09;18!UBERON:0004852;2.51e-09;18!UBERON:0000487;3.54e-09;22!UBERON:0006914;1.37e-08;25!UBERON:0003915;2.22e-07;9!UBERON:0004700;2.22e-07;9!UBERON:0001917;2.22e-07;9 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004638,2.44e-10,18;UBERON:0001986,2.44e-10,18;UBERON:0004852,2.44e-10,18;UBERON:0000487,2.71e-10,22;UBERON:0000055,3.61e-10,68;UBERON:0006914,1.03e-09,25;UBERON:0002049,1.21e-09,78;UBERON:0007798,1.21e-09,78;UBERON:0004872,1.77e-09,83;UBERON:0003915,2.02e-08,9;UBERON:0004700,2.02e-08,9;UBERON:0001917,2.02e-08,9;UBERON:0004535,3.76e-08,109;UBERON:0007500,1.05e-07,59;UBERON:0001981,1.05e-07,59;UBERON:0004537,1.05e-07,59;UBERON:0006965,1.05e-07,59;UBERON:0001009,1.31e-07,112 | |||
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| ||
|short_description=p4@SMCR7L | |short_description=p4@SMCR7L | ||
}} | }} |
Revision as of 04:47, 19 November 2012
Short description: | p4@SMCR7L |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_SMCR7L_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | 0bp_to_ENST00000478342, ENST00000481746_5end |
EntrezGene: | SMCR7L |
HGNC: | 25979 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 3.49e-12 | 24 |
endothelial cell | 3.00e-11 | 36 |
meso-epithelial cell | 1.97e-10 | 45 |
blood vessel endothelial cell | 2.44e-10 | 18 |
embryonic blood vessel endothelial progenitor cell | 2.44e-10 | 18 |
endothelial cell of artery | 2.02e-08 | 9 |
lining cell | 2.47e-08 | 58 |
barrier cell | 2.47e-08 | 58 |
mesodermal cell | 4.20e-07 | 121 |
Ontology term | p-value | n |
---|---|---|
blood vessel endothelium | 2.44e-10 | 18 |
endothelium | 2.44e-10 | 18 |
cardiovascular system endothelium | 2.44e-10 | 18 |
simple squamous epithelium | 2.71e-10 | 22 |
vessel | 3.61e-10 | 68 |
squamous epithelium | 1.03e-09 | 25 |
vasculature | 1.21e-09 | 78 |
vascular system | 1.21e-09 | 78 |
splanchnic layer of lateral plate mesoderm | 1.77e-09 | 83 |
endothelial tube | 2.02e-08 | 9 |
arterial system endothelium | 2.02e-08 | 9 |
endothelium of artery | 2.02e-08 | 9 |
cardiovascular system | 3.76e-08 | 109 |
epithelial tube open at both ends | 1.05e-07 | 59 |
blood vessel | 1.05e-07 | 59 |
blood vasculature | 1.05e-07 | 59 |
vascular cord | 1.05e-07 | 59 |
circulatory system | 1.31e-07 | 112 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.