FFCP PHASE1:Hg19::chr1:170633225..170633230,+: Difference between revisions
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|ontology_enrichment_celltype=CL:0000055!6.53e-38!180;CL:0000057!1.80e-22!75;CL:0000680!1.17e-16!57;CL:0000056!1.17e-16!57;CL:0000355!1.17e-16!57;CL:0000187!2.19e-15!54;CL:0000183!1.22e-14!59;CL:0000359!4.48e-14!32;CL:0000393!3.77e-13!60;CL:0000211!3.77e-13!60;CL:0002620!1.49e-12!23;CL:0000192!7.32e-12!42;CL:0000514!7.32e-12!42;CL:0000048!3.54e-09!430;CL:0000723!1.62e-08!436;CL:0000034!1.09e-07!444;CL:0000188!2.19e-07!9 | |ontology_enrichment_celltype=CL:0000055!6.53e-38!180;CL:0000057!1.80e-22!75;CL:0000680!1.17e-16!57;CL:0000056!1.17e-16!57;CL:0000355!1.17e-16!57;CL:0000187!2.19e-15!54;CL:0000183!1.22e-14!59;CL:0000359!4.48e-14!32;CL:0000393!3.77e-13!60;CL:0000211!3.77e-13!60;CL:0002620!1.49e-12!23;CL:0000192!7.32e-12!42;CL:0000514!7.32e-12!42;CL:0000048!3.54e-09!430;CL:0000723!1.62e-08!436;CL:0000034!1.09e-07!444;CL:0000188!2.19e-07!9 | ||
|ontology_enrichment_celltype_v019=CL:0002570;1.34e-11;8!CL:0000188;6.55e-10;9!CL:0002582;5.88e-09;3!CL:0000594;1.86e-08;3!CL:0002334;1.11e-07;12!CL:0002551;2.03e-07;6!CL:0000197;3.83e-07;6!CL:0000098;3.83e-07;6!CL:0002556;3.83e-07;6!CL:0002167;3.83e-07;6 | |ontology_enrichment_celltype_v019=CL:0002570;1.34e-11;8!CL:0000188;6.55e-10;9!CL:0002582;5.88e-09;3!CL:0000594;1.86e-08;3!CL:0002334;1.11e-07;12!CL:0002551;2.03e-07;6!CL:0000197;3.83e-07;6!CL:0000098;3.83e-07;6!CL:0002556;3.83e-07;6!CL:0002167;3.83e-07;6 | ||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.08e-12,76;CL:0002570,3.33e-12,8;CL:0000188,8.52e-10,9;CL:0002582,2.68e-09,3;CL:0000594,3.09e-08,3;CL:0002551,1.29e-07,6;CL:0002334,1.35e-07,12;CL:0000197,1.89e-07,6;CL:0000098,1.89e-07,6;CL:0002167,1.89e-07,6;CL:0000187,2.79e-07,55;CL:0002556,3.48e-07,6;CL:0002561,5.63e-07,2;CL:0000680,9.82e-07,58;CL:0000056,9.82e-07,58;CL:0000355,9.82e-07,58 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!1.16e-26!83;UBERON:0002329!1.16e-26!83;UBERON:0003077!1.16e-26!83;UBERON:0003059!1.16e-26!83;UBERON:0007282!1.16e-26!83;UBERON:0009618!1.16e-26!83;UBERON:0007285!1.16e-26!83;UBERON:0004290!1.38e-22!70;UBERON:0000486!2.70e-19!82;UBERON:0001134!3.60e-19!61;UBERON:0002036!3.60e-19!61;UBERON:0003082!3.60e-19!61;UBERON:0002385!8.81e-19!63;UBERON:0001015!8.81e-19!63;UBERON:0000383!8.81e-19!63;UBERON:0005256!7.20e-12!143;UBERON:0001637!2.42e-11!42;UBERON:0003509!2.42e-11!42;UBERON:0004572!2.42e-11!42;UBERON:0003102!1.81e-10!95;UBERON:0004573!2.69e-10!33;UBERON:0004571!2.69e-10!33;UBERON:0004872!2.88e-10!84;UBERON:0000475!9.32e-09!365;UBERON:0002199!1.09e-08!45;UBERON:0002416!1.09e-08!45;UBERON:0001981!2.59e-08!60;UBERON:0007500!2.59e-08!60;UBERON:0004537!2.59e-08!60;UBERON:0006965!2.59e-08!60;UBERON:0007100!3.61e-08!27;UBERON:0002100!6.06e-08!216;UBERON:0000948!1.13e-07!24;UBERON:0005498!1.13e-07!24;UBERON:0004140!1.13e-07!24;UBERON:0009881!1.13e-07!24;UBERON:0004141!1.13e-07!24;UBERON:0003084!1.13e-07!24;UBERON:0007005!1.13e-07!24;UBERON:0004139!1.13e-07!24;UBERON:0004291!1.13e-07!24;UBERON:0000479!2.99e-07!787;UBERON:0000055!3.72e-07!69;UBERON:0002097!4.45e-07!40;UBERON:0001013!5.44e-07!14 | |ontology_enrichment_uberon=UBERON:0000914!1.16e-26!83;UBERON:0002329!1.16e-26!83;UBERON:0003077!1.16e-26!83;UBERON:0003059!1.16e-26!83;UBERON:0007282!1.16e-26!83;UBERON:0009618!1.16e-26!83;UBERON:0007285!1.16e-26!83;UBERON:0004290!1.38e-22!70;UBERON:0000486!2.70e-19!82;UBERON:0001134!3.60e-19!61;UBERON:0002036!3.60e-19!61;UBERON:0003082!3.60e-19!61;UBERON:0002385!8.81e-19!63;UBERON:0001015!8.81e-19!63;UBERON:0000383!8.81e-19!63;UBERON:0005256!7.20e-12!143;UBERON:0001637!2.42e-11!42;UBERON:0003509!2.42e-11!42;UBERON:0004572!2.42e-11!42;UBERON:0003102!1.81e-10!95;UBERON:0004573!2.69e-10!33;UBERON:0004571!2.69e-10!33;UBERON:0004872!2.88e-10!84;UBERON:0000475!9.32e-09!365;UBERON:0002199!1.09e-08!45;UBERON:0002416!1.09e-08!45;UBERON:0001981!2.59e-08!60;UBERON:0007500!2.59e-08!60;UBERON:0004537!2.59e-08!60;UBERON:0006965!2.59e-08!60;UBERON:0007100!3.61e-08!27;UBERON:0002100!6.06e-08!216;UBERON:0000948!1.13e-07!24;UBERON:0005498!1.13e-07!24;UBERON:0004140!1.13e-07!24;UBERON:0009881!1.13e-07!24;UBERON:0004141!1.13e-07!24;UBERON:0003084!1.13e-07!24;UBERON:0007005!1.13e-07!24;UBERON:0004139!1.13e-07!24;UBERON:0004291!1.13e-07!24;UBERON:0000479!2.99e-07!787;UBERON:0000055!3.72e-07!69;UBERON:0002097!4.45e-07!40;UBERON:0001013!5.44e-07!14 | ||
|ontology_enrichment_uberon_v019=UBERON:0001013;6.38e-11;14!UBERON:0002385;8.85e-10;31!UBERON:0001015;8.85e-10;31!UBERON:0000383;8.85e-10;31!UBERON:0001134;3.78e-09;16!UBERON:0002036;3.78e-09;16!UBERON:0001758;3.83e-07;6!UBERON:0003672;3.83e-07;6 | |ontology_enrichment_uberon_v019=UBERON:0001013;6.38e-11;14!UBERON:0002385;8.85e-10;31!UBERON:0001015;8.85e-10;31!UBERON:0000383;8.85e-10;31!UBERON:0001134;3.78e-09;16!UBERON:0002036;3.78e-09;16!UBERON:0001758;3.83e-07;6!UBERON:0003672;3.83e-07;6 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001013,3.33e-11,14;UBERON:0002329,4.44e-11,71;UBERON:0003059,4.44e-11,71;UBERON:0007282,4.44e-11,71;UBERON:0004290,4.44e-11,71;UBERON:0009618,4.44e-11,71;UBERON:0003077,7.49e-11,72;UBERON:0007285,7.49e-11,72;UBERON:0007524,1.24e-10,73;UBERON:0007503,1.29e-09,78;UBERON:0000486,9.88e-09,83;UBERON:0001134,3.99e-08,62;UBERON:0002036,3.99e-08,62;UBERON:0003082,3.99e-08,62;UBERON:0002385,9.48e-08,64;UBERON:0001015,9.48e-08,64;UBERON:0000383,9.48e-08,64;UBERON:0001758,3.48e-07,6;UBERON:0003672,3.48e-07,6;UBERON:0005933,5.63e-07,2;UBERON:0005942,5.63e-07,2;UBERON:0005932,5.63e-07,2 | |||
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| ||
|short_description=p25@PRRX1 | |short_description=p25@PRRX1 | ||
}} | }} |
Revision as of 10:00, 19 November 2012
Short description: | p25@PRRX1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_25_at_PRRX1_5end |
Coexpression cluster: | C851_Fibroblast_mesenchymal_Myoblast_normal_Olfactory_skeletal_Osteoblast |
Association with transcript: | -82bp_to_NM_006902, NM_022716, uc001ghe.2, uc001ghf.2_5end |
EntrezGene: | PRRX1 |
HGNC: | 9142 |
UniProt: | P54821 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.08e-12 | 76 |
mesenchymal stem cell of adipose | 3.33e-12 | 8 |
cell of skeletal muscle | 8.52e-10 | 9 |
visceral preadipocyte | 2.68e-09 | 3 |
skeletal muscle satellite cell | 3.09e-08 | 3 |
fibroblast of dermis | 1.29e-07 | 6 |
preadipocyte | 1.35e-07 | 12 |
receptor cell | 1.89e-07 | 6 |
sensory epithelial cell | 1.89e-07 | 6 |
olfactory epithelial cell | 1.89e-07 | 6 |
muscle cell | 2.79e-07 | 55 |
fibroblast of periodontium | 3.48e-07 | 6 |
outer root sheath cell | 5.63e-07 | 2 |
muscle precursor cell | 9.82e-07 | 58 |
myoblast | 9.82e-07 | 58 |
multi-potent skeletal muscle stem cell | 9.82e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
adipose tissue | 3.33e-11 | 14 |
somite | 4.44e-11 | 71 |
presomitic mesoderm | 4.44e-11 | 71 |
presumptive segmental plate | 4.44e-11 | 71 |
dermomyotome | 4.44e-11 | 71 |
trunk paraxial mesoderm | 4.44e-11 | 71 |
paraxial mesoderm | 7.49e-11 | 72 |
presumptive paraxial mesoderm | 7.49e-11 | 72 |
dense mesenchyme tissue | 1.24e-10 | 73 |
epithelial vesicle | 1.29e-09 | 78 |
multilaminar epithelium | 9.88e-09 | 83 |
skeletal muscle tissue | 3.99e-08 | 62 |
striated muscle tissue | 3.99e-08 | 62 |
myotome | 3.99e-08 | 62 |
muscle tissue | 9.48e-08 | 64 |
musculature | 9.48e-08 | 64 |
musculature of body | 9.48e-08 | 64 |
periodontium | 3.48e-07 | 6 |
dentition | 3.48e-07 | 6 |
hair root sheath | 5.63e-07 | 2 |
hair outer root sheath | 5.63e-07 | 2 |
bulb of hair follicle | 5.63e-07 | 2 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.