FFCP PHASE1:Hg19::chr20:61640680..61640707,+: Difference between revisions
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|ontology_enrichment_celltype=CL:0000945!2.11e-20!24;CL:0000826!2.11e-20!24;CL:0000039!1.00e-14!7;CL:0000586!1.00e-14!7;CL:0000838!1.33e-13!52;CL:0000542!2.75e-13!53;CL:0000051!2.75e-13!53;CL:0000785!4.46e-10!2;CL:0000955!4.46e-10!2;CL:0000818!4.46e-10!2;CL:0000954!4.46e-10!2;CL:0000816!4.46e-10!2;CL:0000817!5.64e-07!3 | |ontology_enrichment_celltype=CL:0000945!2.11e-20!24;CL:0000826!2.11e-20!24;CL:0000039!1.00e-14!7;CL:0000586!1.00e-14!7;CL:0000838!1.33e-13!52;CL:0000542!2.75e-13!53;CL:0000051!2.75e-13!53;CL:0000785!4.46e-10!2;CL:0000955!4.46e-10!2;CL:0000818!4.46e-10!2;CL:0000954!4.46e-10!2;CL:0000816!4.46e-10!2;CL:0000817!5.64e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000945;8.58e-40;24!CL:0000946;1.12e-16;1!CL:0000786;1.12e-16;1!CL:0000785;2.43e-16;1!CL:0000819;2.43e-16;1!CL:0000542;1.87e-12;53 | |ontology_enrichment_celltype_v019=CL:0000945;8.58e-40;24!CL:0000946;1.12e-16;1!CL:0000786;1.12e-16;1!CL:0000785;2.43e-16;1!CL:0000819;2.43e-16;1!CL:0000542;1.87e-12;53 | ||
|ontology_enrichment_celltype_v019_2=CL:0000945,8.16e-40,24;CL:0000826,8.16e-40,24;CL:0000785,4.04e-31,2;CL:0000955,4.04e-31,2;CL:0000818,4.04e-31,2;CL:0000954,4.04e-31,2;CL:0000816,4.04e-31,2;CL:0000838,6.09e-23,52;CL:0000542,1.70e-22,53;CL:0000051,1.70e-22,53;CL:0000817,4.02e-21,3;CL:0000946,1.04e-16,1;CL:0000786,1.04e-16,1;CL:0000980,1.04e-16,1;CL:0000819,3.07e-16,1;CL:0000738,3.06e-10,136;CL:0002087,7.41e-10,115;CL:0002031,2.05e-09,120;CL:0000037,4.16e-08,168;CL:0000988,1.21e-07,177;CL:0002032,8.37e-07,161;CL:0000837,8.37e-07,161 | |||
|ontology_enrichment_development_v019=CL:0000954;3.46e-31;2!CL:0000051;1.87e-12;53 | |ontology_enrichment_development_v019=CL:0000954;3.46e-31;2!CL:0000051;1.87e-12;53 | ||
|ontology_enrichment_disease=DOID:0060058!1.44e-27!10;DOID:2531!7.68e-07!51;DOID:0060083!7.68e-07!51 | |ontology_enrichment_disease=DOID:0060058!1.44e-27!10;DOID:2531!7.68e-07!51;DOID:0060083!7.68e-07!51 | ||
|ontology_enrichment_disease_v019=DOID:0060058;1.05e-54;10!DOID:630;7.00e-17;1!DOID:0050177;7.00e-17;1!DOID:0050427;7.00e-17;1!DOID:2355;1.12e-16;1!DOID:0060073;2.43e-16;1!DOID:8675;2.43e-16;1!DOID:74;5.28e-09;2!DOID:2531;4.01e-08;51!DOID:0060083;4.01e-08;51 | |ontology_enrichment_disease_v019=DOID:0060058;1.05e-54;10!DOID:630;7.00e-17;1!DOID:0050177;7.00e-17;1!DOID:0050427;7.00e-17;1!DOID:2355;1.12e-16;1!DOID:0060073;2.43e-16;1!DOID:8675;2.43e-16;1!DOID:74;5.28e-09;2!DOID:2531;4.01e-08;51!DOID:0060083;4.01e-08;51 | ||
|ontology_enrichment_disease_v019_2=DOID:0060058,1.16e-54,10;DOID:630,7.57e-17,1;DOID:0050177,7.57e-17,1;DOID:0050427,7.57e-17,1;DOID:2355,1.21e-16,1;DOID:0060073,3.07e-16,1;DOID:8675,3.07e-16,1;DOID:2531,2.59e-14,51;DOID:0060083,2.59e-14,51;DOID:74,5.49e-09,2 | |||
|ontology_enrichment_uberon=UBERON:0000200!4.63e-11!6;UBERON:0004177!2.00e-10!7;UBERON:0001870!1.87e-09!2;UBERON:0001869!2.47e-08!32;UBERON:0002619!8.78e-08!22;UBERON:0000349!8.95e-08!5;UBERON:0001893!8.98e-08!34;UBERON:0002106!7.53e-07!3;UBERON:0004854!7.53e-07!3;UBERON:0009034!7.53e-07!3;UBERON:0002095!7.53e-07!3;UBERON:0004782!7.53e-07!3;UBERON:0003281!7.53e-07!3;UBERON:0009664!7.53e-07!3;UBERON:0002296!7.53e-07!3;UBERON:0005602!7.53e-07!3;UBERON:0001179!7.53e-07!3;UBERON:0006293!7.53e-07!3;UBERON:0000956!8.81e-07!25;UBERON:0000203!8.81e-07!25 | |ontology_enrichment_uberon=UBERON:0000200!4.63e-11!6;UBERON:0004177!2.00e-10!7;UBERON:0001870!1.87e-09!2;UBERON:0001869!2.47e-08!32;UBERON:0002619!8.78e-08!22;UBERON:0000349!8.95e-08!5;UBERON:0001893!8.98e-08!34;UBERON:0002106!7.53e-07!3;UBERON:0004854!7.53e-07!3;UBERON:0009034!7.53e-07!3;UBERON:0002095!7.53e-07!3;UBERON:0004782!7.53e-07!3;UBERON:0003281!7.53e-07!3;UBERON:0009664!7.53e-07!3;UBERON:0002296!7.53e-07!3;UBERON:0005602!7.53e-07!3;UBERON:0001179!7.53e-07!3;UBERON:0006293!7.53e-07!3;UBERON:0000956!8.81e-07!25;UBERON:0000203!8.81e-07!25 | ||
|ontology_enrichment_uberon_v019=UBERON:0002370;4.71e-31;2!UBERON:0005058;4.71e-31;2!UBERON:0009113;4.71e-31;2!UBERON:0004177;4.83e-28;5!UBERON:0005057;4.83e-28;5 | |ontology_enrichment_uberon_v019=UBERON:0002370;4.71e-31;2!UBERON:0005058;4.71e-31;2!UBERON:0009113;4.71e-31;2!UBERON:0004177;4.83e-28;5!UBERON:0005057;4.83e-28;5 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004177,3.22e-20,7;UBERON:0005057,3.22e-20,7;UBERON:0002370,4.87e-16,4;UBERON:0005058,4.87e-16,4;UBERON:0009113,4.87e-16,4;UBERON:0003295,4.87e-16,4;UBERON:0005562,4.87e-16,4;UBERON:0003351,5.09e-11,6;UBERON:0000974,5.76e-07,10;UBERON:0003408,5.76e-07,10;UBERON:0001042,5.76e-07,10;UBERON:0009145,5.76e-07,10 | |||
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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.13957536094264,1.88831355734875,0.944529375764151,0,0,0,0,0,0,1.47187681102573,7.39280008934592,0,0,0,0,0,0.32389366601898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.5682822806835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.858486162094873,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.0470566846152,0.478278818186467,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0.16480387422676,0,0,0,0,0,0.369254416383208,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179515288819544,0.108647371922008,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0,0.0884575645033392,0,0,0,0,0,0,0,1.094728735294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126621591911757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0,0,0,0,0,0,0,3.13291328643403,0,0.136203406111576,0,0,0,0,0,0,0,0,0,0,0.179287339332845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243585196761792,0,0,0,0,0,0,0.886068179966986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.315446980005013,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0,0,0,0,0,0,0,0,0,0,0,3.57225361422916,0,0.0679697329768317,0.0657727735628491,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198950775161368,0,0,0,0.150962843566674,0,0,0,0,0,0,0,0,0,0.187967835959707,0,10.7936448398923,0,0,0,0,0,0,0,0.0679914901909147,0,0,0,0,0,0,0,0,0.101988829741982,0,0.459474497674225,0.250707539292375,0,0,0,0,0,0,1.42095601639213,2.11054028605917,0,0,0,0,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0.603821380773079,7.05250683067112 | ||
|short_description=p3@LOC63930 | |short_description=p3@LOC63930 | ||
}} | }} |
Revision as of 13:03, 19 November 2012
Short description: | p3@LOC63930 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_LOC63930_5end |
Coexpression cluster: | C4059_Hodgkin_splenic_acute_xeroderma_Burkitt_plasma_thymus |
Association with transcript: | -27bp_to_ENST00000370344, NR_033370, uc002yec.1_5end |
EntrezGene: | LOC63930 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 8.16e-40 | 24 |
pro-B cell | 8.16e-40 | 24 |
mature B cell | 4.04e-31 | 2 |
pre-B-II cell | 4.04e-31 | 2 |
transitional stage B cell | 4.04e-31 | 2 |
small pre-B-II cell | 4.04e-31 | 2 |
immature B cell | 4.04e-31 | 2 |
lymphoid lineage restricted progenitor cell | 6.09e-23 | 52 |
lymphocyte | 1.70e-22 | 53 |
common lymphoid progenitor | 1.70e-22 | 53 |
precursor B cell | 4.02e-21 | 3 |
antibody secreting cell | 1.04e-16 | 1 |
plasma cell | 1.04e-16 | 1 |
plasmablast | 1.04e-16 | 1 |
B-1 B cell | 3.07e-16 | 1 |
leukocyte | 3.06e-10 | 136 |
nongranular leukocyte | 7.41e-10 | 115 |
hematopoietic lineage restricted progenitor cell | 2.05e-09 | 120 |
hematopoietic stem cell | 4.16e-08 | 168 |
hematopoietic cell | 1.21e-07 | 177 |
hematopoietic oligopotent progenitor cell | 8.37e-07 | 161 |
hematopoietic multipotent progenitor cell | 8.37e-07 | 161 |
Ontology term | p-value | n |
---|---|---|
hemopoietic organ | 3.22e-20 | 7 |
immune organ | 3.22e-20 | 7 |
thymus | 4.87e-16 | 4 |
hemolymphoid system gland | 4.87e-16 | 4 |
thymic region | 4.87e-16 | 4 |
pharyngeal gland | 4.87e-16 | 4 |
thymus primordium | 4.87e-16 | 4 |
pharyngeal epithelium | 5.09e-11 | 6 |
neck | 5.76e-07 | 10 |
gland of gut | 5.76e-07 | 10 |
chordate pharynx | 5.76e-07 | 10 |
pharyngeal region of foregut | 5.76e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 1.16e-54 | 10 |
genetic disease | 7.57e-17 | 1 |
monogenic disease | 7.57e-17 | 1 |
xeroderma pigmentosum | 7.57e-17 | 1 |
anemia | 1.21e-16 | 1 |
lymphatic system cancer | 3.07e-16 | 1 |
lymphosarcoma | 3.07e-16 | 1 |
hematologic cancer | 2.59e-14 | 51 |
immune system cancer | 2.59e-14 | 51 |
hematopoietic system disease | 5.49e-09 | 2 |
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Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.