FFCP PHASE1:Hg19::chr5:82767299..82767310,+: Difference between revisions
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|ontology_enrichment_celltype=CL:0002057!9.82e-20!42;CL:0000860!3.71e-17!45;CL:0002194!7.05e-10!63;CL:0000576!7.05e-10!63;CL:0000040!7.05e-10!63;CL:0000559!7.05e-10!63;CL:0000055!2.80e-09!180;CL:0002009!4.34e-09!65;CL:0000766!1.10e-07!76;CL:0000839!2.25e-07!70;CL:0000557!4.53e-07!71 | |ontology_enrichment_celltype=CL:0002057!9.82e-20!42;CL:0000860!3.71e-17!45;CL:0002194!7.05e-10!63;CL:0000576!7.05e-10!63;CL:0000040!7.05e-10!63;CL:0000559!7.05e-10!63;CL:0000055!2.80e-09!180;CL:0002009!4.34e-09!65;CL:0000766!1.10e-07!76;CL:0000839!2.25e-07!70;CL:0000557!4.53e-07!71 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.28e-26;33!CL:0002057;1.28e-26;33!CL:0000473;4.67e-19;39!CL:0000234;4.67e-19;39!CL:0000576;5.95e-16;48!CL:0000766;6.35e-10;69!CL:0002322;2.86e-08;5!CL:0002334;1.36e-07;12 | |ontology_enrichment_celltype_v019=CL:0000860;1.28e-26;33!CL:0002057;1.28e-26;33!CL:0000473;4.67e-19;39!CL:0000234;4.67e-19;39!CL:0000576;5.95e-16;48!CL:0000766;6.35e-10;69!CL:0002322;2.86e-08;5!CL:0002334;1.36e-07;12 | ||
|ontology_enrichment_celltype_v019_2=CL:0000860,8.74e-30,42;CL:0002057,8.74e-30,42;CL:0000473,1.11e-24,48;CL:0000234,1.11e-24,48;CL:0002194,1.27e-17,59;CL:0000576,1.27e-17,59;CL:0000040,1.27e-17,59;CL:0000559,1.27e-17,59;CL:0002009,1.00e-16,61;CL:0000766,3.27e-16,72;CL:0000839,1.00e-14,66;CL:0000557,2.30e-14,67;CL:0002322,1.83e-08,5;CL:0000763,2.85e-08,108;CL:0000049,2.85e-08,108;CL:0002334,2.98e-07,12;CL:0002087,4.92e-07,115;CL:0000034,5.43e-07,441 | |||
|ontology_enrichment_development_v019=CL:0002057;3.04e-21;42 | |ontology_enrichment_development_v019=CL:0002057;3.04e-21;42 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000468!2.19e-10!659;UBERON:0000922!1.90e-09!612;UBERON:0000467!2.13e-08!625;UBERON:0000480!2.91e-08!626;UBERON:0000923!6.85e-08!604;UBERON:0005291!6.85e-08!604;UBERON:0006598!6.85e-08!604;UBERON:0002532!6.85e-08!604;UBERON:0002050!9.26e-08!605;UBERON:0005423!9.26e-08!605;UBERON:0001017!3.94e-07!82;UBERON:0002204!9.89e-07!167 | |ontology_enrichment_uberon=UBERON:0000468!2.19e-10!659;UBERON:0000922!1.90e-09!612;UBERON:0000467!2.13e-08!625;UBERON:0000480!2.91e-08!626;UBERON:0000923!6.85e-08!604;UBERON:0005291!6.85e-08!604;UBERON:0006598!6.85e-08!604;UBERON:0002532!6.85e-08!604;UBERON:0002050!9.26e-08!605;UBERON:0005423!9.26e-08!605;UBERON:0001017!3.94e-07!82;UBERON:0002204!9.89e-07!167 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.46e-11,76;UBERON:0002390,1.53e-10,98;UBERON:0003061,1.53e-10,98;UBERON:0001474,4.61e-10,82;UBERON:0002193,1.17e-08,108;UBERON:0004765,2.09e-08,90;UBERON:0002405,7.21e-08,93;UBERON:0001434,2.65e-07,100;UBERON:0003081,4.25e-07,203;UBERON:0004797,8.10e-07,7 | |||
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| ||
|short_description=p10@VCAN | |short_description=p10@VCAN | ||
}} | }} |
Revision as of 03:08, 21 November 2012
Short description: | p10@VCAN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_10_at_VCAN_5end |
Coexpression cluster: | C4523_Fibroblast_iPS_H9_serous_Smooth_HES3GFP_hepatoblastoma |
Association with transcript: | 15bp_to_ENST00000265077_5end |
EntrezGene: | VCAN |
HGNC: | 2464 |
UniProt: | P13611 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 8.74e-30 | 42 |
CD14-positive, CD16-negative classical monocyte | 8.74e-30 | 42 |
defensive cell | 1.11e-24 | 48 |
phagocyte | 1.11e-24 | 48 |
monopoietic cell | 1.27e-17 | 59 |
monocyte | 1.27e-17 | 59 |
monoblast | 1.27e-17 | 59 |
promonocyte | 1.27e-17 | 59 |
macrophage dendritic cell progenitor | 1.00e-16 | 61 |
myeloid leukocyte | 3.27e-16 | 72 |
myeloid lineage restricted progenitor cell | 1.00e-14 | 66 |
granulocyte monocyte progenitor cell | 2.30e-14 | 67 |
embryonic stem cell | 1.83e-08 | 5 |
myeloid cell | 2.85e-08 | 108 |
common myeloid progenitor | 2.85e-08 | 108 |
preadipocyte | 2.98e-07 | 12 |
nongranular leukocyte | 4.92e-07 | 115 |
stem cell | 5.43e-07 | 441 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.46e-11 | 76 |
hematopoietic system | 1.53e-10 | 98 |
blood island | 1.53e-10 | 98 |
bone element | 4.61e-10 | 82 |
hemolymphoid system | 1.17e-08 | 108 |
skeletal element | 2.09e-08 | 90 |
immune system | 7.21e-08 | 93 |
skeletal system | 2.65e-07 | 100 |
lateral plate mesoderm | 4.25e-07 | 203 |
blood vessel layer | 8.10e-07 | 7 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.