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{{#ask:[[Category:MotifCluster2013March]]|mainlabel=KNOWN ID|?name=name
{{#ask:[[Category:MotifCluster2013March]]|mainlabel=KNOWN ID|?name=name
|?representative_motif_db
|?motifid
|format=ttable|class=tf_table|limit=1100|searchlabel=}}
|format=ttable|class=tf_table|limit=1100|searchlabel=}}



Revision as of 15:46, 26 April 2013


KNOWN IDnameMotifid
NonredundantMotifs:1Lhx8_2247.2
NonredundantMotifs:10ZEB1.p2
NonredundantMotifs:100Sp4_secondary
NonredundantMotifs:101Cphx_3484.1
NonredundantMotifs:102Tcfap2c_secondary
NonredundantMotifs:103TLX1_f1
NonredundantMotifs:104CDX1,2,4.p2
NonredundantMotifs:105ZBTB6.p2
NonredundantMotifs:106E2F2_secondary
NonredundantMotifs:108SPZ1.p2
NonredundantMotifs:109SPZ1_f1
NonredundantMotifs:11MA0065.2
NonredundantMotifs:110Gata6_secondary
NonredundantMotifs:111PBX1_MCF7-PBX1-ChIP-Seq(GSE28007)
NonredundantMotifs:112SMAD1_si
NonredundantMotifs:113Rhox11_2205.1
NonredundantMotifs:114ZBTB33_GM12878-ZBTB33-ChIP-Seq
NonredundantMotifs:115MAZ_f1
NonredundantMotifs:116CDC5L.p2
NonredundantMotifs:117ZBT7B_si
NonredundantMotifs:118POU6F1.p2
NonredundantMotifs:119KLF15_f1
NonredundantMotifs:120MBD2_si
NonredundantMotifs:121Gcm1_primary
NonredundantMotifs:122EWSR1-FLI1.p2
NonredundantMotifs:123MSX1,2.p2
NonredundantMotifs:124ARID5B.p2
NonredundantMotifs:125Osr1_secondary
NonredundantMotifs:126Osr1_primary
NonredundantMotifs:127Sp100_primary
NonredundantMotifs:128ZNF263_K562-Znf263-ChIP-Seq
NonredundantMotifs:129EN1,2.p2
NonredundantMotifs:13STAT1_HelaS3-STAT1-ChIP-Seq
NonredundantMotifs:130SOX17_f2
NonredundantMotifs:131Isgf3g_secondary
NonredundantMotifs:132Sox7_secondary
NonredundantMotifs:133Zbtb12_secondary
NonredundantMotifs:134FUBP1_f1
NonredundantMotifs:135DMC1_Testis-DMC1-ChIP-Seq
NonredundantMotifs:136HMX1.p2
NonredundantMotifs:137IRF5_f1
NonredundantMotifs:138EOMES_f1
NonredundantMotifs:139IRC900814_secondary
NonredundantMotifs:14CDX2_mES-Cdx2-ChIP-Seq
NonredundantMotifs:140Zfp187_primary
NonredundantMotifs:141HXD10_f1
NonredundantMotifs:142POU3F1..4.p2
NonredundantMotifs:143EBNA1_Raji-EBNA1-ChIP-Seq(GSE30709)
NonredundantMotifs:144Sox15_secondary
NonredundantMotifs:145Arid5a_secondary
NonredundantMotifs:146Gabpa_secondary
NonredundantMotifs:147ZN350_f1
NonredundantMotifs:148Irf3_secondary
NonredundantMotifs:149Zbtb3_secondary
NonredundantMotifs:15STAT2_f1
NonredundantMotifs:150HOX(A5,B5).p2
NonredundantMotifs:151MCR_f1
NonredundantMotifs:152ZBTB4!METH_f1
NonredundantMotifs:153TAL1_motifB
NonredundantMotifs:154MYBB_f1
NonredundantMotifs:155FOXC2_f1
NonredundantMotifs:156EPAS1_si
NonredundantMotifs:157Homez_1063.2
NonredundantMotifs:158Sox5_secondary
NonredundantMotifs:159PURA_f1
NonredundantMotifs:16CEBPB_f1
NonredundantMotifs:160TEF_f1
NonredundantMotifs:161Tcf3_secondary
NonredundantMotifs:162Zfp410_primary
NonredundantMotifs:163HXA7_f1
NonredundantMotifs:164ZBT7A_f1
NonredundantMotifs:165ATF5_si
NonredundantMotifs:166TEAD4_f1
NonredundantMotifs:167FOXP3.p2
NonredundantMotifs:169Zfp187_secondary
NonredundantMotifs:17MA0035.2
NonredundantMotifs:170MA0164.1
NonredundantMotifs:171Zfp161_secondary
NonredundantMotifs:172GZF1.p2
NonredundantMotifs:173Zbtb3_primary
NonredundantMotifs:174PAX2_f1
NonredundantMotifs:175PAX8.p2
NonredundantMotifs:176Rxra_secondary
NonredundantMotifs:177NR2E3_f1
NonredundantMotifs:178PAX8_f1
NonredundantMotifs:179PRDM14_H1-PRDM14-ChIP-Seq
NonredundantMotifs:18NHLH1,2.p2
NonredundantMotifs:180GTF2A1,2.p2
NonredundantMotifs:181PAX5_si
NonredundantMotifs:182Arid3a_secondary
NonredundantMotifs:183PROP1_f1
NonredundantMotifs:184PTF1A_f1
NonredundantMotifs:185TGIF1_f1
NonredundantMotifs:186ALX1_si
NonredundantMotifs:187ZEP2_si
NonredundantMotifs:188HXD13_f1
NonredundantMotifs:19LEF1_f1
NonredundantMotifs:190AIRE.p2
NonredundantMotifs:191HLTF_f1
NonredundantMotifs:192HESX1_f1
NonredundantMotifs:193BHE41_f1
NonredundantMotifs:194NANOG(mouse).p2
NonredundantMotifs:195Zfp105_secondary
NonredundantMotifs:196MLXPL_f1
NonredundantMotifs:197ZBTB16.p2
NonredundantMotifs:198BRAC_si
NonredundantMotifs:199Glis2_secondary
NonredundantMotifs:2MA0080.2
NonredundantMotifs:20CREB1_f1
NonredundantMotifs:200ZBTB4_si
NonredundantMotifs:201ALX1.p2
NonredundantMotifs:202Sp100_secondary
NonredundantMotifs:203ARI3A_do
NonredundantMotifs:204Arid5a_primary
NonredundantMotifs:205HMGA2_f1
NonredundantMotifs:206PAX3_Rh4-PAX3
NonredundantMotifs:207Gcm1_secondary
NonredundantMotifs:208Atf1_secondary
NonredundantMotifs:21E2F6_f1
NonredundantMotifs:22Rara_secondary
NonredundantMotifs:23MA0003.1
NonredundantMotifs:24ZEB1_do
NonredundantMotifs:25TGIF1_si
NonredundantMotifs:26NKX25_f1
NonredundantMotifs:27RELA_GM12787-p65-ChIP-Seq
NonredundantMotifs:28MYBL2_Hela-BMYB-ChIPSeq(GSE27030)
NonredundantMotifs:29GCR_do
NonredundantMotifs:3HIF1A_si
NonredundantMotifs:30ZN219_f1
NonredundantMotifs:31NFYB_f1
NonredundantMotifs:32POU5F1_mES-Oct4-ChIP-Seq
NonredundantMotifs:33KLF4_f2
NonredundantMotifs:34NFATC1..3.p2
NonredundantMotifs:35ZIC1_f1
NonredundantMotifs:36RARA_f1
NonredundantMotifs:37NFE2L1.p2
NonredundantMotifs:38MA0112.2
NonredundantMotifs:39RFX1..5_RFXANK_RFXAP.p2
NonredundantMotifs:4FOXO1_si
NonredundantMotifs:40SMAD3_f1
NonredundantMotifs:41RUNX1_Jurkat-RUNX1-ChIP-Seq
NonredundantMotifs:42Sry_primary
NonredundantMotifs:43ZNF143.p2
NonredundantMotifs:44TP53.p2
NonredundantMotifs:45MAFB.p2
NonredundantMotifs:46BPTF.p2
NonredundantMotifs:47NANOG_mES-Nanog-ChIP-Seq
NonredundantMotifs:48MA0108.2
NonredundantMotifs:49Six6_2267.5
NonredundantMotifs:5SOX5.p2
NonredundantMotifs:50MEF2D_f1
NonredundantMotifs:51GFI1.p2
NonredundantMotifs:52PAX5.p2
NonredundantMotifs:53SRF_do
NonredundantMotifs:54POU5F1_SOX2(dimer).p2
NonredundantMotifs:55Zic1_primary
NonredundantMotifs:56Irx4_2242.3
NonredundantMotifs:57NKX2-2,8.p2
NonredundantMotifs:58MZF1.p2
NonredundantMotifs:59NKX3-1.p2
NonredundantMotifs:6PPARA_f1
NonredundantMotifs:60Bbx_primary
NonredundantMotifs:61CTCF_f2
NonredundantMotifs:62MTF1_f1
NonredundantMotifs:63HSF1_f2
NonredundantMotifs:64HNF1B_f1
NonredundantMotifs:65ATF6A_si
NonredundantMotifs:66Hmbox1_2674.1
NonredundantMotifs:67NFIA+NFIB+NFIC+NFIX_f2
NonredundantMotifs:68Srf_secondary
NonredundantMotifs:69MA0090.1
NonredundantMotifs:7JUN_f1
NonredundantMotifs:70COE1_f2
NonredundantMotifs:71Sox8_secondary
NonredundantMotifs:72KLF8_f1
NonredundantMotifs:73MA0146.1
NonredundantMotifs:74SRBP1_f2
NonredundantMotifs:75RXRA_VDR(dimer).p2
NonredundantMotifs:76TFCP2_f1
NonredundantMotifs:77REST_f1
NonredundantMotifs:78Zfp161_primary
NonredundantMotifs:79ARNT2_si
NonredundantMotifs:8OTX2_si
NonredundantMotifs:80Irf6_secondary
NonredundantMotifs:81NRF1_f1
NonredundantMotifs:82Zic2_secondary
NonredundantMotifs:83RARA_f2
NonredundantMotifs:84RREB1_si
NonredundantMotifs:85EVI1.p2
NonredundantMotifs:86Hic1_secondary
NonredundantMotifs:87NFIA+NFIB+NFIC+NFIX_si
NonredundantMotifs:88BRCA1_f1
NonredundantMotifs:89YY1.p2
NonredundantMotifs:9HXB6_f1
NonredundantMotifs:90Sox18_secondary
NonredundantMotifs:91Rfx3_secondary
NonredundantMotifs:92Ehf_secondary
NonredundantMotifs:93HMGA1,2.p2
NonredundantMotifs:94MA0155.1
NonredundantMotifs:95PLAG1_f1
NonredundantMotifs:96MA0068.1
NonredundantMotifs:97HINFP_f1
NonredundantMotifs:98Klf7_secondary
NonredundantMotifs:99POU1F1.p2

hello!yes,serkanSerkan
SiteName =FANTOM5_SSTAR
Server = http://f5-webapp4.gsc.riken.jp
Server Name =f5-webapp4.gsc.riken.jp
DirMark = ‎
Direction Mark =‎
Script Path/5/sstar
Style Path =/5/sstar/skins
Current Version=1.39.3
CONTENTLANGUAGE=en
CONTENTLANG=en
REVISIONID=-
NUMBEROFPAGES=1,058,399
NUMBEROFARTICLES=377
NUMBEROFFILES=18
NUMBEROFEDITS=4,965,953
NUMBEROFVIEWS=Template:NUMBEROFVIEWS
NUMBEROFUSERS=8
NUMBEROFADMINS=5
NUMBEROFACTIVEUSERS=2
BASEPAGENAME=Serkan
PAGENAME=Serkan
FULLPAGENAME=User:Serkan
NAMESPACE=User
CURRENTTIME=13:34
CURRENTMONTH=12
CURRENTMONTHNAME=December
CURRENTDAY=23
CURRENTDAYNAME=Monday

JASPAR_IDName
MA0002.2RUNX1
Runx1
MA0003.1TFAP2A
Tfap2a
MA0004.1Arnt
ARNT
MA0006.1Arnt
ARNT
Ahr
AHR
MA0007.1Ar
AR
MA0009.1T
MA0014.1Pax5
PAX5
MA0017.1NR2F1
Nr2f1
MA0018.2CREB1
Creb1
MA0019.1Ddit3
DDIT3
Cebpa
CEBPA
MA0024.1E2F1
E2f1
MA0025.1NFIL3
Nfil3
MA0027.1En1
EN1
MA0028.1ELK1
Elk1
MA0029.1Evi1
MA0030.1FOXF2
Foxf2
MA0031.1FOXD1
Foxd1
MA0035.2Gata1
GATA1
MA0038.1Gfi
MA0039.2Klf4
KLF4
MA0040.1Foxq1
FOXQ1
MA0041.1Foxd3
FOXD3
MA0042.1FOXI1
Foxi1
MA0043.1HLF
Hlf
MA0046.1HNF1A
Hnf1a
MA0047.2Foxa2
FOXA2
MA0048.1NHLH1
Nhlh1
MA0050.1IRF1
Irf1
MA0051.1IRF2
Irf2
MA0052.1MEF2A
Mef2a
MA0055.1Myf
MA0057.1MZF1_5-13
MA0058.1MAX
Max
MA0059.1Myc
MYC
Max
MAX
MA0060.1NFYA
Nfya
MA0061.1NF-kappaB
MA0062.2GABPA
Gabpa
MA0065.2PPARG
Pparg
RXRA
Rxra
MA0066.1PPARG
Pparg
MA0067.1Pax2
PAX2
MA0068.1Pax4
PAX4
MA0069.1Pax6
PAX6
MA0070.1PBX1
Pbx1
MA0071.1RORA_1
MA0072.1RORA_2
MA0073.1RREB1
Rreb1
MA0074.1RXRA
Rxra
VDR
Vdr
MA0076.1ELK4
Elk4
MA0077.1SOX9
Sox9
MA0078.1Sox17
SOX17
MA0079.2SP1
Sp1
MA0080.2SPI1
MA0081.1SPIB
Spib
MA0083.1SRF
Srf
MA0084.1SRY
MA0087.1Sox5
SOX5
MA0088.1znf143
ZNF143
MA0090.1TEAD1
Tead1
MA0091.1TAL1
Tal1
TCF3
Tcf3
MA0092.1Hand1
HAND1
Tcfe2a
TCFE2A
MA0093.1USF1
Usf1
MA0099.2AP1
MA0100.1Myb
MYB
MA0101.1REL
Rel
MA0102.2CEBPA
Cebpa
MA0103.1ZEB1
Zeb1
MA0104.2Mycn
MYCN
MA0105.1NFKB1
Nfkb1
MA0106.1TP53
MA0107.1RELA
Rela
MA0108.2TBP
Tbp
MA0111.1Spz1
SPZ1
MA0112.2ESR1
Esr1
MA0113.1NR3C1
Nr3c1
MA0114.1HNF4A
Hnf4a
MA0115.1NR1H2
Nr1h2
RXRA
Rxra
MA0116.1Zfp423
MA0117.1Mafb
MAFB
MA0119.1TLX1
Tlx1
NFIC
Nfic
MA0122.1Nkx3-2
NKX3-2
MA0124.1NKX3-1
Nkx3-1
MA0125.1Nobox
MA0131.1MIZF
MA0135.1Lhx3
LHX3
MA0136.1ELF5
Elf5
MA0137.2STAT1
Stat1
MA0138.2REST
Rest
MA0139.1CTCF
Ctcf
MA0140.1Tal1
TAL1
Gata1
GATA1
MA0141.1Esrrb
ESRRB
MA0142.1Pou5f1
POU5F1
MA0143.1Sox2
SOX2
MA0144.1Stat3
STAT3
MA0145.1Tcfcp2l1
MA0146.1Zfx
ZFX
MA0147.1Myc
MYC
MA0148.1FOXA1
Foxa1
MA0149.1EWSR1-FLI1
MA0150.1NFE2L2
Nfe2l2
MA0152.1NFATC2
Nfatc2
MA0153.1HNF1B
Hnf1b
MA0154.1EBF1
Ebf1
MA0155.1INSM1
Insm1
MA0156.1FEV
MA0157.1FOXO3
Foxo3
MA0159.1RXR
RAR_DR5
MA0160.1NR4A2
Nr4a2
MA0162.1Egr1
EGR1
MA0163.1PLAG1
Plag1
MA0164.1Nr2e3
NR2E3
MA0258.1ESR2
Esr2
MA0259.1HIF1A
Hif1a
ARNT
Arnt


FF ontology idNameSample categoryDatafreeze phase
10000-101A1Clontech Human Universal Reference Total RNA, pool1tissues2
10001-101A3Clontech Mouse Universal Reference Total RNA, pool1tissues2
10002-101A5SABiosciences XpressRef Human Universal Total RNA, pool1tissues2
10003-101A7SABiosciences XpressRef Mouse Universal Total RNA, pool1tissues2
10004-101A9chicken embryo whole body, day10 (HH37)tissues-1
10005-101B1{{{name}}}{{{sample_category}}}-1
10006-101B2Universal RNA - Dog Normal Tissues Biochain, pool1tissues-1
10007-101B4Universal RNA - Human Normal Tissues Biochain, pool1tissues2
10008-101B6Universal RNA - Mouse Normal Tissues Biochain, pool1tissues2
10009-101B8Universal RNA - Rat Normal Tissues Biochain, pool1tissues-1
10010-101C1adipose tissue, adult, pool1tissues2
10011-101C2bladder, adult, pool1tissues2
10012-101C3brain, adult, pool1tissues2
10013-101C4cervix, adult, pool1tissues2
10014-101C5colon, adult, pool1tissues2
10015-101C6esophagus, adult, pool1tissues2
10016-101C7heart, adult, pool1tissues2
10017-101C8kidney, adult, pool1tissues2
10018-101C9liver, adult, pool1tissues2
10019-101D1lung, adult, pool1tissues2
FF ontology idNameSample categoryDatafreeze phase
10000-101A1Clontech Human Universal Reference Total RNA, pool1tissues2
10001-101A3Clontech Mouse Universal Reference Total RNA, pool1tissues2
10002-101A5SABiosciences XpressRef Human Universal Total RNA, pool1tissues2
10003-101A7SABiosciences XpressRef Mouse Universal Total RNA, pool1tissues2
10004-101A9chicken embryo whole body, day10 (HH37)tissues-1
10005-101B1{{{name}}}{{{sample_category}}}-1
10006-101B2Universal RNA - Dog Normal Tissues Biochain, pool1tissues-1
10007-101B4Universal RNA - Human Normal Tissues Biochain, pool1tissues2
10008-101B6Universal RNA - Mouse Normal Tissues Biochain, pool1tissues2
10009-101B8Universal RNA - Rat Normal Tissues Biochain, pool1tissues-1
10010-101C1adipose tissue, adult, pool1tissues2
10011-101C2bladder, adult, pool1tissues2
10012-101C3brain, adult, pool1tissues2
10013-101C4cervix, adult, pool1tissues2
10014-101C5colon, adult, pool1tissues2
10015-101C6esophagus, adult, pool1tissues2
10016-101C7heart, adult, pool1tissues2
10017-101C8kidney, adult, pool1tissues2
10018-101C9liver, adult, pool1tissues2
10019-101D1lung, adult, pool1tissues2
FF ontology idNameSample categoryDatafreeze phase
10000-101A1Clontech Human Universal Reference Total RNA, pool1tissues2
10001-101A3Clontech Mouse Universal Reference Total RNA, pool1tissues2
10002-101A5SABiosciences XpressRef Human Universal Total RNA, pool1tissues2
10003-101A7SABiosciences XpressRef Mouse Universal Total RNA, pool1tissues2
10004-101A9chicken embryo whole body, day10 (HH37)tissues-1
10005-101B1{{{name}}}{{{sample_category}}}-1
10006-101B2Universal RNA - Dog Normal Tissues Biochain, pool1tissues-1
10007-101B4Universal RNA - Human Normal Tissues Biochain, pool1tissues2
10008-101B6Universal RNA - Mouse Normal Tissues Biochain, pool1tissues2
10009-101B8Universal RNA - Rat Normal Tissues Biochain, pool1tissues-1
10010-101C1adipose tissue, adult, pool1tissues2
10011-101C2bladder, adult, pool1tissues2
10012-101C3brain, adult, pool1tissues2
10013-101C4cervix, adult, pool1tissues2
10014-101C5colon, adult, pool1tissues2
10015-101C6esophagus, adult, pool1tissues2
10016-101C7heart, adult, pool1tissues2
10017-101C8kidney, adult, pool1tissues2
10018-101C9liver, adult, pool1tissues2
10019-101D1lung, adult, pool1tissues2