FFCP PHASE1:Hg19::chr11:66082918..66082935,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C563|description=CAGE_peak_at_chr11:66082918..66082935,-|id=chr11:66082918..66082935,-|ontology_enrichment_celltype=CL:0000055!1.88e-24!180;CL:0000057!2.64e-23!75;CL:0002620!1.18e-12!23;CL:0000048!1.66e-11!430;CL:0000723!8.48e-11!436;CL:0000034!3.28e-10!444;CL:0000183!6.31e-10!59;CL:0000680!1.34e-09!57;CL:0000056!1.34e-09!57;CL:0000355!1.34e-09!57;CL:0002334!3.17e-09!12;CL:0000187!3.56e-09!54;CL:0002320!9.87e-08!365;CL:0000393!2.49e-07!60;CL:0000211!2.49e-07!60;CL:0000136!4.81e-07!15|ontology_enrichment_celltype_v019=CL:0002334;2.65e-16;12!CL:0002570;1.16e-09;8!CL:0000136;1.20e-09;13!CL:0002620;3.56e-09;23!CL:0000134;7.88e-09;55!CL:0000723;1.58e-08;61!CL:0002559;3.15e-08;5!CL:0002521;3.52e-08;3!CL:0000135;3.64e-08;3!CL:0000388;3.64e-08;3!CL:0000048;3.71e-08;58!CL:0002577;1.34e-07;3!CL:0002582;3.17e-07;3!CL:0002320;6.55e-07;188!CL:0002579;6.71e-07;3!CL:0000034;9.99e-07;69|ontology_enrichment_celltype_v019_2=CL:0000057,1.76e-16,76;CL:0002334,3.20e-16,12;CL:0000136,4.63e-13,15;CL:0002320,6.90e-13,361;CL:0000134,1.88e-11,354;CL:0000048,2.97e-11,427;CL:0000723,7.58e-11,433;CL:0000034,2.53e-10,441;CL:0002570,7.25e-10,8;CL:0002620,2.49e-09,23;CL:0000219,4.85e-09,386;CL:0002559,2.82e-08,5;CL:0000135,2.98e-08,3;CL:0000388,2.98e-08,3;CL:0002521,3.27e-08,3;CL:0002577,1.29e-07,3;CL:0002582,2.93e-07,3;CL:0002579,7.34e-07,3|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000914!1.19e-13!83;UBERON:0002329!1.19e-13!83;UBERON:0003077!1.19e-13!83;UBERON:0003059!1.19e-13!83;UBERON:0007282!1.19e-13!83;UBERON:0009618!1.19e-13!83;UBERON:0007285!1.19e-13!83;UBERON:0002199!9.09e-13!45;UBERON:0002416!9.09e-13!45;UBERON:0004290!9.19e-12!70;UBERON:0003102!6.46e-10!95;UBERON:0000486!7.36e-10!82;UBERON:0001134!1.25e-09!61;UBERON:0002036!1.25e-09!61;UBERON:0003082!1.25e-09!61;UBERON:0002385!1.30e-09!63;UBERON:0001015!1.30e-09!63;UBERON:0000383!1.30e-09!63;UBERON:0002097!4.90e-09!40;UBERON:0005256!9.16e-09!143;UBERON:0001013!4.85e-08!14;UBERON:0002384!8.44e-08!375;UBERON:0004923!9.19e-08!57;UBERON:0000475!2.35e-07!365;UBERON:0002100!3.61e-07!216;UBERON:0003124!3.79e-07!7;UBERON:0005631!7.87e-07!14;UBERON:0000158!7.87e-07!14;UBERON:0002072!9.47e-07!5|ontology_enrichment_uberon_v019=UBERON:0004457;4.45e-14;9!UBERON:0000042;4.45e-14;9!UBERON:0002072;1.71e-12;5!UBERON:0001013;6.69e-12;14!UBERON:0003688;7.67e-12;6!UBERON:0002358;7.67e-12;6!UBERON:0003684;7.67e-12;6!UBERON:0001178;7.67e-12;6!UBERON:0002199;7.40e-10;46!UBERON:0002416;7.40e-10;46!UBERON:0002073;3.15e-08;5!UBERON:0002190;3.52e-08;3!UBERON:0007846;3.64e-08;3!UBERON:0000043;3.64e-08;3!UBERON:0007845;3.64e-08;3!UBERON:0002384;5.25e-08;198!UBERON:0003102;6.68e-08;50|ontology_enrichment_uberon_v019_2=UBERON:0002199,6.73e-15,46;UBERON:0002416,6.73e-15,46;UBERON:0002384,9.09e-13,371;UBERON:0002072,1.53e-12,5;UBERON:0001013,4.30e-12,14;UBERON:0003688,8.09e-12,6;UBERON:0002358,8.09e-12,6;UBERON:0003684,8.09e-12,6;UBERON:0001178,8.09e-12,6;UBERON:0004923,2.12e-11,66;UBERON:0004457,3.05e-10,12;UBERON:0000042,3.05e-10,12;UBERON:0002097,8.22e-09,41;UBERON:0003102,1.99e-08,99;UBERON:0002073,2.82e-08,5;UBERON:0005086,2.82e-08,5;UBERON:0007846,2.98e-08,3;UBERON:0000043,2.98e-08,3;UBERON:0007845,2.98e-08,3;UBERON:0002190,3.27e-08,3;UBERON:0003124,2.00e-07,7;UBERON:0005631,9.86e-07,14;UBERON:0000158,9.86e-07,14|phase1_expression=1.09007027562334,2.35510576280081,1.9733616573436,1.0007329835313,1.34088328328186,0,7.59899634504932,2.52687949370732,4.70134130759709,0,0,0.218441372130172,0,0.618831764800233,0.331397375727916,0.672325146451775,0,0.730310090387373,0,0.123121058076788,0.204000691244253,0,0.286235987131057,0,0.251085279189606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127986611154418,0,0,0,0,0,0.144824403882799,9.75227465255847,0,0,1.44575660953827,0.50133791063589,1.30361867064741,0,0,0,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.48485975847659,0.759783069987479,0.264818361626438,5.16305917347865,0.709336764396714,0.560677600142307,0,0,0.311211035399766,0,0,0.756787138224657,0,0,1.87296046098192,0,1.94283284717341,0.469737994575059,0.323745888736263,0,0.61246251376468,0.368502951935304,2.6864703105699,2.37600571456411,0.989067717114227,0,0.718618141816238,0,0.250237039743928,1.10825646193673,0.877955241761676,0.919463387397059,0.45071417671979,0,3.58779271377724,1.06778694409284,0.211931901159562,3.30100205692843,0.721367704669072,1.28820270022815,1.30281799432113,2.70042131586026,0.876933046450788,2.52433774244115,0.644349290496095,1.61646056818812,8.52023022039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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C563 | |||
|description=CAGE_peak_at_chr11:66082918..66082935,- | |||
|id=chr11:66082918..66082935,- | |||
|ontology_enrichment_celltype=CL:0000055!1.88e-24!180;CL:0000057!2.64e-23!75;CL:0002620!1.18e-12!23;CL:0000048!1.66e-11!430;CL:0000723!8.48e-11!436;CL:0000034!3.28e-10!444;CL:0000183!6.31e-10!59;CL:0000680!1.34e-09!57;CL:0000056!1.34e-09!57;CL:0000355!1.34e-09!57;CL:0002334!3.17e-09!12;CL:0000187!3.56e-09!54;CL:0002320!9.87e-08!365;CL:0000393!2.49e-07!60;CL:0000211!2.49e-07!60;CL:0000136!4.81e-07!15 | |||
|ontology_enrichment_celltype_v019=CL:0002334;2.65e-16;12!CL:0002570;1.16e-09;8!CL:0000136;1.20e-09;13!CL:0002620;3.56e-09;23!CL:0000134;7.88e-09;55!CL:0000723;1.58e-08;61!CL:0002559;3.15e-08;5!CL:0002521;3.52e-08;3!CL:0000135;3.64e-08;3!CL:0000388;3.64e-08;3!CL:0000048;3.71e-08;58!CL:0002577;1.34e-07;3!CL:0002582;3.17e-07;3!CL:0002320;6.55e-07;188!CL:0002579;6.71e-07;3!CL:0000034;9.99e-07;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.76e-16,76;CL:0002334,3.20e-16,12;CL:0000136,4.63e-13,15;CL:0002320,6.90e-13,361;CL:0000134,1.88e-11,354;CL:0000048,2.97e-11,427;CL:0000723,7.58e-11,433;CL:0000034,2.53e-10,441;CL:0002570,7.25e-10,8;CL:0002620,2.49e-09,23;CL:0000219,4.85e-09,386;CL:0002559,2.82e-08,5;CL:0000135,2.98e-08,3;CL:0000388,2.98e-08,3;CL:0002521,3.27e-08,3;CL:0002577,1.29e-07,3;CL:0002582,2.93e-07,3;CL:0002579,7.34e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!1.19e-13!83;UBERON:0002329!1.19e-13!83;UBERON:0003077!1.19e-13!83;UBERON:0003059!1.19e-13!83;UBERON:0007282!1.19e-13!83;UBERON:0009618!1.19e-13!83;UBERON:0007285!1.19e-13!83;UBERON:0002199!9.09e-13!45;UBERON:0002416!9.09e-13!45;UBERON:0004290!9.19e-12!70;UBERON:0003102!6.46e-10!95;UBERON:0000486!7.36e-10!82;UBERON:0001134!1.25e-09!61;UBERON:0002036!1.25e-09!61;UBERON:0003082!1.25e-09!61;UBERON:0002385!1.30e-09!63;UBERON:0001015!1.30e-09!63;UBERON:0000383!1.30e-09!63;UBERON:0002097!4.90e-09!40;UBERON:0005256!9.16e-09!143;UBERON:0001013!4.85e-08!14;UBERON:0002384!8.44e-08!375;UBERON:0004923!9.19e-08!57;UBERON:0000475!2.35e-07!365;UBERON:0002100!3.61e-07!216;UBERON:0003124!3.79e-07!7;UBERON:0005631!7.87e-07!14;UBERON:0000158!7.87e-07!14;UBERON:0002072!9.47e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0004457;4.45e-14;9!UBERON:0000042;4.45e-14;9!UBERON:0002072;1.71e-12;5!UBERON:0001013;6.69e-12;14!UBERON:0003688;7.67e-12;6!UBERON:0002358;7.67e-12;6!UBERON:0003684;7.67e-12;6!UBERON:0001178;7.67e-12;6!UBERON:0002199;7.40e-10;46!UBERON:0002416;7.40e-10;46!UBERON:0002073;3.15e-08;5!UBERON:0002190;3.52e-08;3!UBERON:0007846;3.64e-08;3!UBERON:0000043;3.64e-08;3!UBERON:0007845;3.64e-08;3!UBERON:0002384;5.25e-08;198!UBERON:0003102;6.68e-08;50 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002199,6.73e-15,46;UBERON:0002416,6.73e-15,46;UBERON:0002384,9.09e-13,371;UBERON:0002072,1.53e-12,5;UBERON:0001013,4.30e-12,14;UBERON:0003688,8.09e-12,6;UBERON:0002358,8.09e-12,6;UBERON:0003684,8.09e-12,6;UBERON:0001178,8.09e-12,6;UBERON:0004923,2.12e-11,66;UBERON:0004457,3.05e-10,12;UBERON:0000042,3.05e-10,12;UBERON:0002097,8.22e-09,41;UBERON:0003102,1.99e-08,99;UBERON:0002073,2.82e-08,5;UBERON:0005086,2.82e-08,5;UBERON:0007846,2.98e-08,3;UBERON:0000043,2.98e-08,3;UBERON:0007845,2.98e-08,3;UBERON:0002190,3.27e-08,3;UBERON:0003124,2.00e-07,7;UBERON:0005631,9.86e-07,14;UBERON:0000158,9.86e-07,14 | |||
|phase1_expression=1.09007027562334,2.35510576280081,1.9733616573436,1.0007329835313,1.34088328328186,0,7.59899634504932,2.52687949370732,4.70134130759709,0,0,0.218441372130172,0,0.618831764800233,0.331397375727916,0.672325146451775,0,0.730310090387373,0,0.123121058076788,0.204000691244253,0,0.286235987131057,0,0.251085279189606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127986611154418,0,0,0,0,0,0.144824403882799,9.75227465255847,0,0,1.44575660953827,0.50133791063589,1.30361867064741,0,0,0,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.48485975847659,0.759783069987479,0.264818361626438,5.16305917347865,0.709336764396714,0.560677600142307,0,0,0.311211035399766,0,0,0.756787138224657,0,0,1.87296046098192,0,1.94283284717341,0.469737994575059,0.323745888736263,0,0.61246251376468,0.368502951935304,2.6864703105699,2.37600571456411,0.989067717114227,0,0.718618141816238,0,0.250237039743928,1.10825646193673,0.877955241761676,0.919463387397059,0.45071417671979,0,3.58779271377724,1.06778694409284,0.211931901159562,3.30100205692843,0.721367704669072,1.28820270022815,1.30281799432113,2.70042131586026,0.876933046450788,2.52433774244115,0.644349290496095,1.61646056818812,8.52023022039874,0.906768884048762,0.67824236924195,0,0,0,0,0.132529768321485,0,0,0,0,0,5.78916844373597,2.76269842704961,3.25057549622385,5.0531563716871,0,0,0,0,0,0,0,0,0,0,0,0.8231480226628,1.47008711385542,0,0,0,0.441463099414651,0,0.171567810298526,0,0,0,0,0,0,0,0,0.234817388471643,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492663237895943,0,0.207328115540772,0,0,0.063497894292169,0,0,0,0.102827492703324,0,0,0.336393253036082,0.43596006883328,0.7333828582095,0.129271715757778,3.57656445851882,0,2.39344304926383,3.12022310734098,1.02882949704857,0,0.532844358032199,1.00084595560703,2.17048642156577,0,0.65147236858747,1.06617584622764,0,0,0,0,0,0,0,0,0,0,0.868687840005475,0.205476322550383,0,0,0,0,0,0,0,0,0,0,0,0,0,0.736148950314839,3.00102312635806,0.813795071099207,0.623912584592421,2.14114786556594,1.89242898040722,0.468565659970853,0,2.27407504055985,3.10419213877515,0.664225598535437,0.368738337083406,1.73767228936166,2.54541504701563,1.02943027143257,0,0,0,1.21251028578504,3.32870879020994,3.93107381328584,1.24053903909388,0.153461973288062,1.12264037773229,1.92208723883551,2.04682899626681,1.12597744800525,0,3.23840356985577,3.72879623157567,1.97105174433142,2.07701771673448,2.20799719073923,0,0,0,0,1.0925470080403,0.524497659837696,0,0.0770153371044148,0,0,0,0,0,0,0,0.270946437543853,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,3.21367859688319,0.773365746336976,0.924291702687866,0.15350367472613,0.137836572484531,0.751941714077915,2.17525040871343,0.426133137080504,1.15741646340759,0,0,0,0,0,6.61105928344344,0.6970372701606,0,0,0.869932992075073,0.37064843820784,0,0,0.632758849437452,0.953150969619124,0.767693373934002,2.99557291623744,0.636406495851874,0,0.179872457583315,0.274537029736055,0.706874414074119,0,0,0,0,0.731140468893853,2.11300293513511,0.409499734223957,1.69686518344455,0,0,0,0.876901770507525,1.15755106853338,0,0.405820753925408,0.6196469961995,0.281695602532241,0.286822704408103,0.491245205065606,0,0.354761064070598,2.9555068941673,5.92730807327823,0.379473173765715,0.699869440489966,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.73254089635947,0,0,0,0,0,0.307160702099232,0,0,0,0,0,0.398495976502139,0.552567831062295,0,0,0,0.933118762985422,0,0,0,0.394573622547734,0,0,0,0,0,0,0,1.44999915086959,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0,0,0,0.307801034015188,0,0,0,0,0.957003479195758,1.00757352742049,1.06606955203727,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0.802577647298789,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,1.22308667769421,0,0,0,0,0.290967049465258,0,0.225980740780532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0824158583811665,0.13480708770837,0,0,0,0,0,0,0,0,0,0,0,0,0.262272940674991,0,0,0,0.714695326373367,0,0,0.542999601753713,1.72844298240254,1.95952416065645,0,0,0,0,0,0,0,0,0,0,0,0.314408610199332,0,0,0,0,0,0,0,0,0.327872630709804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.64180283175561,1.63599316893057,2.21922344601045,0.757612021100357,1.50940741051545,2.66943366478961,0,1.36107831386915,1.24349760466224,0.295710299979268,0.159296767163702,0,0,0.414706207840855,0.53168342911599,0,0,1.14241563650639,0,0.181848659202559,0.107410557042488,0,1.99047944349308,0,2.74716564146234,3.70424437642511,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368211900503681,0,0,0,0,0,0.327628914576042,0.169732529954025,0.850299680406731,0.495743057036009,0,0,0,0,2.1160556621441,1.2249819094128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0,0.351742488719241,0,0,0,0,0,0.975726071789027,0,0,0,0,0,0,0.156986185701028,0,0,0.91315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| |||
|short_description=p@chr11:66082918..66082935,- | |||
}} |
Revision as of 19:07, 10 September 2013
Short description: | p@chr11:66082918..66082935, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:66082918..66082935, - |
Coexpression cluster: | C563_Mesenchymal_Fibroblast_Adipocyte_tenocyte_Placental_Hair_Synoviocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.76e-16 | 76 |
preadipocyte | 3.20e-16 | 12 |
fat cell | 4.63e-13 | 15 |
connective tissue cell | 6.90e-13 | 361 |
mesenchymal cell | 1.88e-11 | 354 |
multi fate stem cell | 2.97e-11 | 427 |
somatic stem cell | 7.58e-11 | 433 |
stem cell | 2.53e-10 | 441 |
mesenchymal stem cell of adipose | 7.25e-10 | 8 |
skin fibroblast | 2.49e-09 | 23 |
motile cell | 4.85e-09 | 386 |
hair follicle cell | 2.82e-08 | 5 |
fibrocyte | 2.98e-08 | 3 |
tendon cell | 2.98e-08 | 3 |
subcutaneous fat cell | 3.27e-08 | 3 |
placental epithelial cell | 1.29e-07 | 3 |
visceral preadipocyte | 2.93e-07 | 3 |
omentum preadipocyte | 7.34e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
integument | 6.73e-15 | 46 |
integumental system | 6.73e-15 | 46 |
connective tissue | 9.09e-13 | 371 |
hypodermis | 1.53e-12 | 5 |
adipose tissue | 4.30e-12 | 14 |
omentum | 8.09e-12 | 6 |
peritoneum | 8.09e-12 | 6 |
abdominal cavity | 8.09e-12 | 6 |
visceral peritoneum | 8.09e-12 | 6 |
organ component layer | 2.12e-11 | 66 |
cavity lining | 3.05e-10 | 12 |
serous membrane | 3.05e-10 | 12 |
skin of body | 8.22e-09 | 41 |
surface structure | 1.99e-08 | 99 |
hair follicle | 2.82e-08 | 5 |
hair follicle placode | 2.82e-08 | 5 |
dense regular connective tissue | 2.98e-08 | 3 |
tendon | 2.98e-08 | 3 |
regular connective tissue | 2.98e-08 | 3 |
subcutaneous adipose tissue | 3.27e-08 | 3 |
chorion | 2.00e-07 | 7 |
extraembryonic membrane | 9.86e-07 | 14 |
membranous layer | 9.86e-07 | 14 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.