FFCP PHASE1:Hg19::chr11:67776012..67776048,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=221|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA|HGNC=410|TSSclassifier=S|UniProt=A3FMP9,P43353|association_with_transcript=0bp_to_ENST00000433100,ENST00000539229,NM_001161473,uc010rpy.1_5end|description=CAGE_peak_3_at_ALDH3B1_5end|id=chr11:67776012..67776048,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000097;7.95e-12;5!CL:0002586;3.77e-08;3!CL:0002619;6.61e-07;3|ontology_enrichment_celltype_v019_2=CL:0000097,8.76e-12,5;CL:0002028,8.76e-12,5;CL:0002586,4.21e-08,3;CL:0002619,4.75e-07,3|ontology_enrichment_development_v019=UBERON:0008947;8.02e-15;29!UBERON:0006595;7.57e-07;86|ontology_enrichment_disease=DOID:305!2.96e-11!106;DOID:0050687!8.42e-07!143|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=DOID:305,1.81e-09,106|ontology_enrichment_uberon=UBERON:0007023!9.93e-22!115;UBERON:0001049!1.73e-12!57;UBERON:0005068!1.73e-12!57;UBERON:0006241!1.73e-12!57;UBERON:0007135!1.73e-12!57;UBERON:0001737!1.01e-10!9;UBERON:0005743!2.17e-10!86;UBERON:0000073!7.27e-10!94;UBERON:0001016!7.27e-10!94;UBERON:0002616!3.63e-09!59;UBERON:0003075!4.28e-09!86;UBERON:0007284!4.28e-09!86;UBERON:0002780!9.04e-09!41;UBERON:0001890!9.04e-09!41;UBERON:0006240!9.04e-09!41;UBERON:0002346!1.02e-08!90;UBERON:0003080!2.18e-08!42;UBERON:0000955!2.96e-08!69;UBERON:0006238!2.96e-08!69;UBERON:0001017!3.30e-08!82;UBERON:0001041!2.66e-07!98;UBERON:0004921!3.82e-07!129;UBERON:0004185!3.82e-07!129;UBERON:0008947!4.03e-07!38;UBERON:0003258!4.03e-07!38;UBERON:0003056!6.33e-07!61|ontology_enrichment_uberon_v019=UBERON:0001737;9.79e-21;9!UBERON:0001557;9.79e-21;9!UBERON:0000966;3.44e-08;5!UBERON:0005388;3.44e-08;5!UBERON:0001802;3.44e-08;5!UBERON:0001781;3.77e-08;3!UBERON:0001782;3.77e-08;3!UBERON:0000072;3.78e-08;37!UBERON:0000065;8.04e-07;44|ontology_enrichment_uberon_v019_2=UBERON:0001737,1.00e-20,9;UBERON:0001557,1.21e-10,19;UBERON:0008947,2.38e-10,38;UBERON:0003258,2.38e-10,38;UBERON:0001041,5.68e-09,87;UBERON:0001782,4.21e-08,3;UBERON:0005424,4.21e-08,3;UBERON:0004921,1.01e-07,118;UBERON:0000072,1.13e-07,47;UBERON:0000065,3.91e-07,54;UBERON:0000966,9.09e-07,6;UBERON:0005388,9.09e-07,6;UBERON:0001802,9.09e-07,6|phase1_expression=0,0,0,0,0,0,0,0,0,0,0.697801167972428,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0,0,0,0,0,0,0,0.383829398097213,0,0,0,0,0,0.426507697462265,0.293600439334847,0,0,0,2.46307021663917,1.6194683300949,1.54545340580512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0.211255286311942,0.637812899895131,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,1.58030450865046,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.579386075843295,0,0.486634870302636,0,0,0,4.06035134042909,0,0,0.324547393654683,0.174129737299267,0,0,0.571994910780128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30648779579902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.785817601275,3.20310911148393,4.57920956778616,3.639701100169,3.26819166138609,3.79632990577755,3.23595139584395,2.5508790466295,4.23221872641029,0,0,0,0,0,0,0.590789906681404,0,0.122988438543114,0,0,0,0,0,0,0,0,0.34779121492523,0,0.144366447761074,0,0,0,0,2.70838706696137,0.468008530278475,1.63494278517601,0,0,0,0,0,0,1.47798971368783,2.0251139823042,4.14656231081544,4.32359860250884,3.7872730027914,0.444485260045183,1.14596527667483,0,0,0.102827492703324,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,1.2162378064119,9.04062764577828,0,0,0,0,0,0.410952645100767,0,0,0,0,0,0.508189248444927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0,0,0,0,0,0,0,0.128139149255701,0,0,0,0,0,0,0,0,0,0,0.184161977871793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.19259876645935,0.784306353074702,2.05160100093111,4.92021968549559,6.83294628795036,0.618246069886334,0,0,0,0,0,0,0,0,0,0,0.145016693914229,0.0852266274161009,0.0890320356467374,0,0,0,0,0,0,0,0.308033580176089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0.329294892959902,0,0,0,0,0,0.282431402330337,0,1.68471475667626,0,0,0,0,0,0.238231775457789,0,0,0,0,0,0,0,1.11481905075431,0.721346064882224,0,0,0,0,0,2.59697552219644,7.86232098717685,3.65175486453108,3.44695770700651,0,0,0,0.201799707191048,0,0,0,0,0,2.73543333562856,0,0,0,0,0,3.7428108081644,0,0,0,0,0,0,0,0,0.281338832821026,0.333926115068718,0,0,0.398495976502139,0.276283915531148,0,1.32949287252801,0.123084805461069,0,0,6.26574111364632,0,0.0986434056369336,0,0,0,0.927680981618513,0,0,0.0874599999961957,0,0.796554137998498,2.2882828526349,0,11.3765313169683,0.291604613383254,0,0.885741385813839,0.482385754501632,0,0,0.295547618953547,0,11.329600205975,0.278847488557207,0.615602068030377,0,0,0,0,0,0,0,0,0,2.32696354660219,0,0,0,0,2.70192184266644,0,1.46909527343233,0,0,0,2.21143911258348,0.611030144933625,0,0,0,1.68502832451693,0,1.1713222286267,0.182454789215666,0.391329237864179,0,0,1.2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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=221 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=410 | |||
|TSSclassifier=S | |||
|UniProt=A3FMP9,P43353 | |||
|association_with_transcript=0bp_to_ENST00000433100,ENST00000539229,NM_001161473,uc010rpy.1_5end | |||
|description=CAGE_peak_3_at_ALDH3B1_5end | |||
|id=chr11:67776012..67776048,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000097;7.95e-12;5!CL:0002586;3.77e-08;3!CL:0002619;6.61e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,8.76e-12,5;CL:0002028,8.76e-12,5;CL:0002586,4.21e-08,3;CL:0002619,4.75e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0008947;8.02e-15;29!UBERON:0006595;7.57e-07;86 | |||
|ontology_enrichment_disease=DOID:305!2.96e-11!106;DOID:0050687!8.42e-07!143 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:305,1.81e-09,106 | |||
|ontology_enrichment_uberon=UBERON:0007023!9.93e-22!115;UBERON:0001049!1.73e-12!57;UBERON:0005068!1.73e-12!57;UBERON:0006241!1.73e-12!57;UBERON:0007135!1.73e-12!57;UBERON:0001737!1.01e-10!9;UBERON:0005743!2.17e-10!86;UBERON:0000073!7.27e-10!94;UBERON:0001016!7.27e-10!94;UBERON:0002616!3.63e-09!59;UBERON:0003075!4.28e-09!86;UBERON:0007284!4.28e-09!86;UBERON:0002780!9.04e-09!41;UBERON:0001890!9.04e-09!41;UBERON:0006240!9.04e-09!41;UBERON:0002346!1.02e-08!90;UBERON:0003080!2.18e-08!42;UBERON:0000955!2.96e-08!69;UBERON:0006238!2.96e-08!69;UBERON:0001017!3.30e-08!82;UBERON:0001041!2.66e-07!98;UBERON:0004921!3.82e-07!129;UBERON:0004185!3.82e-07!129;UBERON:0008947!4.03e-07!38;UBERON:0003258!4.03e-07!38;UBERON:0003056!6.33e-07!61 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;9.79e-21;9!UBERON:0001557;9.79e-21;9!UBERON:0000966;3.44e-08;5!UBERON:0005388;3.44e-08;5!UBERON:0001802;3.44e-08;5!UBERON:0001781;3.77e-08;3!UBERON:0001782;3.77e-08;3!UBERON:0000072;3.78e-08;37!UBERON:0000065;8.04e-07;44 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,1.00e-20,9;UBERON:0001557,1.21e-10,19;UBERON:0008947,2.38e-10,38;UBERON:0003258,2.38e-10,38;UBERON:0001041,5.68e-09,87;UBERON:0001782,4.21e-08,3;UBERON:0005424,4.21e-08,3;UBERON:0004921,1.01e-07,118;UBERON:0000072,1.13e-07,47;UBERON:0000065,3.91e-07,54;UBERON:0000966,9.09e-07,6;UBERON:0005388,9.09e-07,6;UBERON:0001802,9.09e-07,6 | |||
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| |||
|short_description=p3@ALDH3B1 | |||
}} |
Revision as of 19:19, 10 September 2013
Short description: | p3@ALDH3B1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_ALDH3B1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000433100, ENST00000539229, NM_001161473, uc010rpy.1_5end |
EntrezGene: | ALDH3B1 |
HGNC: | 410 |
UniProt: | A3FMP9P43353 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 8.76e-12 | 5 |
basophil mast progenitor cell | 8.76e-12 | 5 |
retinal pigment epithelial cell | 4.21e-08 | 3 |
adult endothelial progenitor cell | 4.75e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
larynx | 1.00e-20 | 9 |
upper respiratory tract | 1.21e-10 | 19 |
respiratory primordium | 2.38e-10 | 38 |
endoderm of foregut | 2.38e-10 | 38 |
foregut | 5.68e-09 | 87 |
pigmented layer of retina | 4.21e-08 | 3 |
presumptive retinal pigmented epithelium | 4.21e-08 | 3 |
subdivision of digestive tract | 1.01e-07 | 118 |
segment of respiratory tract | 1.13e-07 | 47 |
respiratory tract | 3.91e-07 | 54 |
retina | 9.09e-07 | 6 |
photoreceptor array | 9.09e-07 | 6 |
posterior segment of eyeball | 9.09e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 1.81e-09 | 106 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.