FFCP PHASE1:Hg19::chr11:821805..821820,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=57104|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=30802|TSSclassifier=S|UniProt=|association_with_transcript=31bp_to_ENST00000534561_5end|coexpression_cluster_id=C220|description=CAGE_peak_4_at_PNPLA2_5end|id=chr11:821805..821820,+|ontology_enrichment_celltype=CL:0000860!4.33e-09!45;CL:0000136!7.18e-09!15;CL:0002057!1.10e-08!42|ontology_enrichment_celltype_v019=CL:0000136;2.05e-11;13!CL:0000860;4.01e-11;33!CL:0002057;4.01e-11;33!CL:0000473;1.81e-07;39!CL:0000234;1.81e-07;39|ontology_enrichment_celltype_v019_2=CL:0000136,7.63e-12,15;CL:0000860,6.39e-11,42;CL:0002057,6.39e-11,42;CL:0000473,5.30e-09,48;CL:0000234,5.30e-09,48|ontology_enrichment_development_v019=CL:0002057;6.66e-08;42|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0000926,6.18e-07,315;UBERON:0004120,6.18e-07,315;UBERON:0006603,6.18e-07,315|phase1_expression=1.45342703416445,40.2508984915048,3.38290569830331,3.00219895059391,12.0679495495368,0.872338524100369,27.8629865985142,2.52687949370732,23.2455209097856,0.737201809504527,2.79120467188971,0,0.263766978228454,0.990130823680373,0.994192127183747,0.672325146451775,1.80808358407193,1.46062018077475,3.41552959153355,0.123121058076788,1.42800483870977,0,0.286235987131057,1.09499540058307,0.125542639594803,0.382067028739756,0.492603536699674,0.236132343941038,0.786728553697808,0.383829398097213,0.154816123316076,0.919421224478927,0.30120591877825,0.369754010166788,0.154934401160603,0.142169232487422,0.293600439334847,0,3.20871115952227,1.30206522429511,0.447830948479849,0.32389366601898,0,2.18097358169347,0,1.69808842831471,1.85943229524548,0.822335776043652,0.309706370895104,5.46615545412086,3.33008918487831,1.18241114944293,3.10271112662957,1.93645405075148,0,2.25890807451126,1.91034305040492,0.898893937780338,4.89734227793444,2.24650318953266,3.19668562899521,1.9791078011203,2.99195486432448,0.852449501065388,3.19230162491442,2.26954089876456,3.73693349397345,3.01498398308092,0,2.17188844705117,1.21079900526674,1.10483290796269,2.84816148696796,0.633765858935825,1.27562579979026,0.628975936525128,1.90958672949042,2.4028302854641,1.6072558669708,0.570025487482497,0.59675003159727,0.365328307529268,0,0.546138611262131,0.889509253863555,1.28019066769952,0.400395987036012,0,1.32208974556972,0,0,2.34894875748376,0.382273228125229,0,0,0.263384084775077,0.393419540227666,2.35806457649499,1.43921049299656,0.83593247695339,0.977766799900771,0,0,1.22551502573691,0.883817722424512,0.886135578334485,0.270803863765016,0.512365278902701,0.260118695119756,0.657751618414705,2.21080014228679,0.579606171470105,1.03800594213442,1.33770414044857,0,0.113309342697566,1.53288197440768,0.68725489096526,0.253019692019503,0,0,0,0.301150238155546,0.255973222308837,1.24930726552346,1.18388626022008,0.821127996921047,0.403213486449465,2.94184215361858,0.724122019413995,0,0,0,0,1.00267582127178,2.31754430337318,0,0.486634870302636,0.567208902984407,0.443458794925128,0.87834785693126,0.392937226493138,0,0,0.649094787309367,0.174129737299267,0.664789802594326,0,0.571994910780128,0,0,0,0,0,0.838998872419812,1.10047216776027,0.626984899610432,0.258416759169329,0,0.33472061276467,0,0,2.19655851793353,0.367663080345869,2.43042584364528,0.803697554556718,0.44905874525234,0.337834441449967,0,0,0.183201743930407,0,0,0,1.49091585508596,0.886413581652058,0.926864265692532,0,1.77334191099179,2.24271040056923,0,1.97334038733728,0,0.538842688278752,0.326923806226917,0.151357427644931,0.576175924479999,0.234321431833797,0.624320153660641,0.570471821544449,1.64393548606981,0.587172493218824,0.323745888736263,0.421352420106746,0.816616685019573,1.22834317311768,1.44656093646072,1.18800285728205,5.68713937340681,0,2.87447256726495,0.168336113954066,0.500474079487857,0,0,5.51678032438235,3.45547535485173,0.226864366320042,0,0.640672166455702,0.211931901159562,0.600182192168805,0.515262646192195,1.54584324027377,0.744467425326359,0,1.16924406193438,0.252433774244115,0.552299391853796,0.484938170456436,0.355009592516614,0.403008392910561,0.339121184620975,0,0.272746120590835,0,0.365921118388786,0,0.232387885739037,0.310983165046111,0.252320850875628,0,0,3.21620469096443,0,3.25057549622385,3.60939740834793,1.0647612003586,1.01150814046861,0.964044119533928,0.772057809126758,1.08939722046203,0.474541238222193,1.34831308160164,1.56977172100277,1.15424147083917,2.95262181849859,1.40241773803446,0,0,1.26755034821831,0,0.590789906681404,1.7658523976586,0.368965315629341,0.171567810298526,0.219500570817251,0,0.100528972411631,0.462942225792648,0.325808305310325,2.07986957055916,0,0.231860809950154,0,0.433099343283221,0.462985512576611,0.951270761172991,0,1.71697232418975,0,0.234004265139238,0.297262324577456,0,0.335964256397719,0.283550194484773,0.0895585227028483,0.290633938513962,1.15014803749563,0,0.616339038092582,0.8293124621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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=57104 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30802 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=31bp_to_ENST00000534561_5end | |||
|coexpression_cluster_id=C220 | |||
|description=CAGE_peak_4_at_PNPLA2_5end | |||
|id=chr11:821805..821820,+ | |||
|ontology_enrichment_celltype=CL:0000860!4.33e-09!45;CL:0000136!7.18e-09!15;CL:0002057!1.10e-08!42 | |||
|ontology_enrichment_celltype_v019=CL:0000136;2.05e-11;13!CL:0000860;4.01e-11;33!CL:0002057;4.01e-11;33!CL:0000473;1.81e-07;39!CL:0000234;1.81e-07;39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,7.63e-12,15;CL:0000860,6.39e-11,42;CL:0002057,6.39e-11,42;CL:0000473,5.30e-09,48;CL:0000234,5.30e-09,48 | |||
|ontology_enrichment_development_v019=CL:0002057;6.66e-08;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000926,6.18e-07,315;UBERON:0004120,6.18e-07,315;UBERON:0006603,6.18e-07,315 | |||
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| |||
|short_description=p4@PNPLA2 | |||
}} |
Revision as of 19:54, 10 September 2013
Short description: | p4@PNPLA2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_PNPLA2_5end |
Coexpression cluster: | C220_Adipocyte_mature_left_breast_skin_liver_adipose |
Association with transcript: | 31bp_to_ENST00000534561_5end |
EntrezGene: | PNPLA2 |
HGNC: | 30802 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 7.63e-12 | 15 |
classical monocyte | 6.39e-11 | 42 |
CD14-positive, CD16-negative classical monocyte | 6.39e-11 | 42 |
defensive cell | 5.30e-09 | 48 |
phagocyte | 5.30e-09 | 48 |
Ontology term | p-value | n |
---|---|---|
mesoderm | 6.18e-07 | 315 |
mesoderm-derived structure | 6.18e-07 | 315 |
presumptive mesoderm | 6.18e-07 | 315 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.