FFCP PHASE1:Hg19::chr12:21815245..21815251,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA|HGNC=|TSSclassifier=W|UniProt=|association_with_transcript=0bp_to_ENST00000541860_5end|coexpression_cluster_id=C391|description=CAGE_peak_1_at_ENST00000541860_5end|id=chr12:21815245..21815251,+|ontology_enrichment_celltype=CL:0002368!5.36e-15!13;CL:0002076!1.46e-09!43;CL:0002202!2.93e-09!9;CL:0002632!2.93e-09!9;CL:0000082!1.32e-07!19;CL:0000066!7.83e-07!254|ontology_enrichment_celltype_v019=CL:0000082;4.72e-08;19!CL:0002368;1.06e-07;13|ontology_enrichment_celltype_v019_2=CL:0000082,4.58e-08,19;CL:0002368,1.13e-07,13|ontology_enrichment_development_v019=UBERON:0008947;7.04e-10;29!UBERON:0001041;1.61e-09;30|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:1324;5.93e-07;15|ontology_enrichment_disease_v019_2=DOID:1324,5.66e-07,15|ontology_enrichment_uberon=UBERON:0006554!1.97e-14!44;UBERON:0001008!5.80e-14!45;UBERON:0005153!2.28e-13!37;UBERON:0005177!7.60e-12!107;UBERON:0000464!1.13e-11!104;UBERON:0002048!1.95e-11!22;UBERON:0000117!1.95e-11!22;UBERON:0000171!1.95e-11!22;UBERON:0000170!1.95e-11!22;UBERON:0005597!1.95e-11!22;UBERON:0000118!1.95e-11!22;UBERON:0000065!2.82e-10!53;UBERON:0000489!2.93e-10!32;UBERON:0002113!5.59e-10!27;UBERON:0003918!5.59e-10!27;UBERON:0005095!5.59e-10!27;UBERON:0007687!5.59e-10!27;UBERON:0005178!9.89e-10!34;UBERON:0002224!9.89e-10!34;UBERON:0005181!2.50e-09!35;UBERON:0000466!2.77e-09!126;UBERON:0009569!3.80e-09!113;UBERON:0005911!1.73e-08!82;UBERON:0008947!2.98e-08!38;UBERON:0003258!2.98e-08!38;UBERON:0003101!3.03e-08!22;UBERON:0000079!3.03e-08!22;UBERON:0005157!3.35e-08!51;UBERON:0003887!8.63e-08!21;UBERON:0003064!1.17e-07!37;UBERON:0004802!1.32e-07!19;UBERON:0000115!1.32e-07!19;UBERON:0001004!1.44e-07!72;UBERON:0006555!3.40e-07!17;UBERON:0005103!3.40e-07!17;UBERON:0000083!3.40e-07!17;UBERON:0009201!3.40e-07!17;UBERON:0004819!3.40e-07!17;UBERON:0006553!3.40e-07!17;UBERON:0003074!3.40e-07!17;UBERON:0003060!3.40e-07!17;UBERON:0004119!5.55e-07!169;UBERON:0000925!5.55e-07!169;UBERON:0006595!5.55e-07!169;UBERON:0007196!6.28e-07!14;UBERON:0001558!6.28e-07!14|ontology_enrichment_uberon_v019=UBERON:0002048;4.05e-17;22!UBERON:0000117;4.05e-17;22!UBERON:0000171;4.05e-17;22!UBERON:0000170;4.05e-17;22!UBERON:0005178;5.09e-12;34!UBERON:0002224;5.09e-12;34!UBERON:0006554;1.57e-11;30!UBERON:0001008;1.57e-11;30!UBERON:0002113;2.40e-11;24!UBERON:0011143;2.40e-11;24!UBERON:0005181;7.33e-11;35!UBERON:0000489;3.02e-09;29!UBERON:0000065;3.67e-09;44!UBERON:0004802;4.72e-08;19!UBERON:0000115;4.72e-08;19!UBERON:0002171;9.10e-08;1!UBERON:0006518;9.10e-08;1!UBERON:0008949;9.10e-08;1!UBERON:0000101;9.10e-08;1!UBERON:0002167;9.10e-08;1!UBERON:0000473;1.49e-07;8!UBERON:0004807;6.45e-07;22|ontology_enrichment_uberon_v019_2=UBERON:0002048,3.84e-17,22;UBERON:0000117,3.84e-17,22;UBERON:0000171,3.84e-17,22;UBERON:0000170,3.84e-17,22;UBERON:0005597,3.84e-17,22;UBERON:0000118,3.84e-17,22;UBERON:0005178,2.35e-13,34;UBERON:0002224,2.35e-13,34;UBERON:0005181,6.23e-13,35;UBERON:0005177,3.69e-12,101;UBERON:0008947,8.57e-12,38;UBERON:0003258,8.57e-12,38;UBERON:0009569,1.20e-10,112;UBERON:0002113,1.84e-10,26;UBERON:0003918,1.84e-10,26;UBERON:0011143,1.84e-10,26;UBERON:0005095,1.84e-10,26;UBERON:0007687,1.84e-10,26;UBERON:0000065,9.11e-10,54;UBERON:0005153,1.05e-09,37;UBERON:0000489,1.22e-08,31;UBERON:0000915,3.20e-08,52;UBERON:0001004,4.29e-08,74;UBERON:0004802,4.58e-08,19;UBERON:0000115,4.58e-08,19;UBERON:0002171,9.10e-08,1;UBERON:0006518,9.10e-08,1;UBERON:0008949,9.10e-08,1;UBERON:0000101,9.10e-08,1;UBERON:0002167,9.10e-08,1;UBERON:0000473,1.61e-07,8;UBERON:0005157,2.18e-07,47;UBERON:0006554,5.42e-07,47;UBERON:0001008,7.99e-07,48|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,3.48900583986214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0,0,0,0,0,0.919421224478927,1.204823675113,0.369754010166788,0.232401601740905,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167186495390678,0,0,0,0.222820913770347,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.78073625566651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132529768321485,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245976877086227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.839910640994298,0,0,0,0,0.985326475791887,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224170287987055,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.27407504055985,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0.200506470303285,0.184161977871793,0,0,0,0,0.385076685522074,1.56869953835371,0,1.26661954671451,0,0,0,0,0.270946437543853,0,0.764628819135115,2.49322802678617,0.671624264166535,0.219259876645935,0,0,0,0,4.9459685590906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| ||
|DPIdataset=robustDPI | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |||
|TSSclassifier=W | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000541860_5end | |||
|coexpression_cluster_id=C391 | |||
|description=CAGE_peak_1_at_ENST00000541860_5end | |||
|id=chr12:21815245..21815251,+ | |||
|ontology_enrichment_celltype=CL:0002368!5.36e-15!13;CL:0002076!1.46e-09!43;CL:0002202!2.93e-09!9;CL:0002632!2.93e-09!9;CL:0000082!1.32e-07!19;CL:0000066!7.83e-07!254 | |||
|ontology_enrichment_celltype_v019=CL:0000082;4.72e-08;19!CL:0002368;1.06e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000082,4.58e-08,19;CL:0002368,1.13e-07,13 | |||
|ontology_enrichment_development_v019=UBERON:0008947;7.04e-10;29!UBERON:0001041;1.61e-09;30 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:1324;5.93e-07;15 | |||
|ontology_enrichment_disease_v019_2=DOID:1324,5.66e-07,15 | |||
|ontology_enrichment_uberon=UBERON:0006554!1.97e-14!44;UBERON:0001008!5.80e-14!45;UBERON:0005153!2.28e-13!37;UBERON:0005177!7.60e-12!107;UBERON:0000464!1.13e-11!104;UBERON:0002048!1.95e-11!22;UBERON:0000117!1.95e-11!22;UBERON:0000171!1.95e-11!22;UBERON:0000170!1.95e-11!22;UBERON:0005597!1.95e-11!22;UBERON:0000118!1.95e-11!22;UBERON:0000065!2.82e-10!53;UBERON:0000489!2.93e-10!32;UBERON:0002113!5.59e-10!27;UBERON:0003918!5.59e-10!27;UBERON:0005095!5.59e-10!27;UBERON:0007687!5.59e-10!27;UBERON:0005178!9.89e-10!34;UBERON:0002224!9.89e-10!34;UBERON:0005181!2.50e-09!35;UBERON:0000466!2.77e-09!126;UBERON:0009569!3.80e-09!113;UBERON:0005911!1.73e-08!82;UBERON:0008947!2.98e-08!38;UBERON:0003258!2.98e-08!38;UBERON:0003101!3.03e-08!22;UBERON:0000079!3.03e-08!22;UBERON:0005157!3.35e-08!51;UBERON:0003887!8.63e-08!21;UBERON:0003064!1.17e-07!37;UBERON:0004802!1.32e-07!19;UBERON:0000115!1.32e-07!19;UBERON:0001004!1.44e-07!72;UBERON:0006555!3.40e-07!17;UBERON:0005103!3.40e-07!17;UBERON:0000083!3.40e-07!17;UBERON:0009201!3.40e-07!17;UBERON:0004819!3.40e-07!17;UBERON:0006553!3.40e-07!17;UBERON:0003074!3.40e-07!17;UBERON:0003060!3.40e-07!17;UBERON:0004119!5.55e-07!169;UBERON:0000925!5.55e-07!169;UBERON:0006595!5.55e-07!169;UBERON:0007196!6.28e-07!14;UBERON:0001558!6.28e-07!14 | |||
|ontology_enrichment_uberon_v019=UBERON:0002048;4.05e-17;22!UBERON:0000117;4.05e-17;22!UBERON:0000171;4.05e-17;22!UBERON:0000170;4.05e-17;22!UBERON:0005178;5.09e-12;34!UBERON:0002224;5.09e-12;34!UBERON:0006554;1.57e-11;30!UBERON:0001008;1.57e-11;30!UBERON:0002113;2.40e-11;24!UBERON:0011143;2.40e-11;24!UBERON:0005181;7.33e-11;35!UBERON:0000489;3.02e-09;29!UBERON:0000065;3.67e-09;44!UBERON:0004802;4.72e-08;19!UBERON:0000115;4.72e-08;19!UBERON:0002171;9.10e-08;1!UBERON:0006518;9.10e-08;1!UBERON:0008949;9.10e-08;1!UBERON:0000101;9.10e-08;1!UBERON:0002167;9.10e-08;1!UBERON:0000473;1.49e-07;8!UBERON:0004807;6.45e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002048,3.84e-17,22;UBERON:0000117,3.84e-17,22;UBERON:0000171,3.84e-17,22;UBERON:0000170,3.84e-17,22;UBERON:0005597,3.84e-17,22;UBERON:0000118,3.84e-17,22;UBERON:0005178,2.35e-13,34;UBERON:0002224,2.35e-13,34;UBERON:0005181,6.23e-13,35;UBERON:0005177,3.69e-12,101;UBERON:0008947,8.57e-12,38;UBERON:0003258,8.57e-12,38;UBERON:0009569,1.20e-10,112;UBERON:0002113,1.84e-10,26;UBERON:0003918,1.84e-10,26;UBERON:0011143,1.84e-10,26;UBERON:0005095,1.84e-10,26;UBERON:0007687,1.84e-10,26;UBERON:0000065,9.11e-10,54;UBERON:0005153,1.05e-09,37;UBERON:0000489,1.22e-08,31;UBERON:0000915,3.20e-08,52;UBERON:0001004,4.29e-08,74;UBERON:0004802,4.58e-08,19;UBERON:0000115,4.58e-08,19;UBERON:0002171,9.10e-08,1;UBERON:0006518,9.10e-08,1;UBERON:0008949,9.10e-08,1;UBERON:0000101,9.10e-08,1;UBERON:0002167,9.10e-08,1;UBERON:0000473,1.61e-07,8;UBERON:0005157,2.18e-07,47;UBERON:0006554,5.42e-07,47;UBERON:0001008,7.99e-07,48 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,3.48900583986214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0,0,0,0,0,0.919421224478927,1.204823675113,0.369754010166788,0.232401601740905,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167186495390678,0,0,0,0.222820913770347,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.78073625566651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132529768321485,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245976877086227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.839910640994298,0,0,0,0,0.985326475791887,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224170287987055,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.27407504055985,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0.200506470303285,0.184161977871793,0,0,0,0,0.385076685522074,1.56869953835371,0,1.26661954671451,0,0,0,0,0.270946437543853,0,0.764628819135115,2.49322802678617,0.671624264166535,0.219259876645935,0,0,0,0,4.94596855909067,0.457847324091717,0.495056999523528,0,0,0,0.096670718292122,0,0,0.551346289938122,0,0,0,0,0.165284915360978,0.960950336825531,6.25302291223462,0.6069466851333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288666338176536,0,1.08890984861323,5.74277184738353,0,1.68471475667626,0.443430153536676,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0.0711418433484141,0,0,0,0,0,0,0,0,0,0.169291777801603,0,0.201799707191048,0,0.343505344755765,0,0,0,0,0,0,0,0,0,0,0,0,1.00299045849731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0.0874599999961957,0,9.78623655255297,60.0038614690928,0,0,0.291604613383254,0,0,0,0,0,0,0,0,0,0,0.227884111694002,0,0.0897576444097721,0.108647371922008,0,0,0,0,0,0,0.225595660617181,0,0.167821586975843,0.189753732724185,0.476809736941136,0.210998064528027,0,0.565412285735763,0,0,0,0,2.6686901581256,0,0,0,0,0,0,0,0,0,0,0,0,9.62069884252752,0.207376382794494,0,0,0.313932918407225,0,0,0,0,0,0.0870592065804026,0.34945333648406,0,0.0967563312890851,0.365446585430928,0.328461828212837,0,0,0,0.137041924646751,0,0,0,0,0,0,0.144090417154106,0,0,0,2.48505071130865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169346664131569,0,0,0,0,0,0,0,0,0,1.89133697518076,1.94081976099493,87.7538796476268,0,0,0,0,0,0,0,0,0,0.164185041498678,0,0,0,0,0,0.13223260174269,11.2917313003657,2.81926008926669,3.52398461473392,25.4670974261459,10.7702154390271,0,0,0.243585196761792,0,0,4.7631079864313,0.306345576763462,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303859956177382,0,0,0,0,0,0.245772908753719,0,0.19998739585493,0,0,0,0,0,0,0,0,0,0,0.169732529954025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.00548529691159,0,0,0,0.690359926060101,5.76857044137197,0,0,0,0,0.163771917510097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.532214220975833,0.115233987555779,0,0,0,0,0.333694205676207,0.078493092850514,0,0.560544326627578,0,0.215927591218621,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22910686854405,0,0,0.111855431797792,0,0,0,0,1.1598144313382,0,0,0,0,0.11294608203896,0.109940516745429,0,0,0,0,0,0,0.196308467114945,0,0,0,0,0.0644578879735772,0.0999411559249289,0,0,0,0,0,0,0.157771562193185,0,0,0,0,0,0,0.378499274505237,0.109265571963696,0,0.61193297845189,0,0.0918948995348449,2.25636785363138,4.54672189309436,12.058385857028,0,0,0,0,0,0.0620747142958579,0,0,0,0,0,0,0.143444410785353,0,0,0,0,0,0,0.122241444182866,0,0,0,0 | |||
|short_description=p1@ENST00000541860 | |||
}} |
Revision as of 22:09, 10 September 2013
Short description: | p1@ENST00000541860 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_ENST00000541860_5end |
Coexpression cluster: | C391_large_bronchioalveolar_fibrosarcoma_lung_pancreatic_giant_testis |
Association with transcript: | 0bp_to_ENST00000541860_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of lung | 4.58e-08 | 19 |
respiratory epithelial cell | 1.13e-07 | 13 |
Ontology term | p-value | n |
---|---|---|
lung | 3.84e-17 | 22 |
respiratory tube | 3.84e-17 | 22 |
respiration organ | 3.84e-17 | 22 |
pair of lungs | 3.84e-17 | 22 |
lung primordium | 3.84e-17 | 22 |
lung bud | 3.84e-17 | 22 |
thoracic cavity element | 2.35e-13 | 34 |
thoracic cavity | 2.35e-13 | 34 |
thoracic segment organ | 6.23e-13 | 35 |
trunk region element | 3.69e-12 | 101 |
respiratory primordium | 8.57e-12 | 38 |
endoderm of foregut | 8.57e-12 | 38 |
subdivision of trunk | 1.20e-10 | 112 |
kidney | 1.84e-10 | 26 |
kidney mesenchyme | 1.84e-10 | 26 |
upper urinary tract | 1.84e-10 | 26 |
kidney rudiment | 1.84e-10 | 26 |
kidney field | 1.84e-10 | 26 |
respiratory tract | 9.11e-10 | 54 |
epithelial bud | 1.05e-09 | 37 |
cavitated compound organ | 1.22e-08 | 31 |
thoracic segment of trunk | 3.20e-08 | 52 |
respiratory system | 4.29e-08 | 74 |
respiratory tract epithelium | 4.58e-08 | 19 |
lung epithelium | 4.58e-08 | 19 |
lower lobe of right lung | 9.10e-08 | 1 |
right lung lobe | 9.10e-08 | 1 |
lower lobe of lung | 9.10e-08 | 1 |
lobe of lung | 9.10e-08 | 1 |
right lung | 9.10e-08 | 1 |
testis | 1.61e-07 | 8 |
epithelial fold | 2.18e-07 | 47 |
urinary system structure | 5.42e-07 | 47 |
renal system | 7.99e-07 | 48 |
Ontology term | p-value | n |
---|---|---|
lung cancer | 5.66e-07 | 15 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.