FFCP PHASE1:Hg19::chr12:52626580..52626598,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=3855|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=6445|TSSclassifier=S|UniProt=P08729|association_with_transcript=-299bp_to_ENST00000331817_5end|coexpression_cluster_id=C3290|description=CAGE_peak_8_at_KRT7_5end|id=chr12:52626580..52626598,+|ontology_enrichment_celltype=CL:0000066!6.71e-24!254;CL:0000213!3.94e-23!57;CL:0000215!3.94e-23!57;CL:0002139!4.48e-15!24;CL:0002078!1.92e-14!44;CL:0000076!4.32e-14!62;CL:0000077!6.89e-13!19;CL:0000222!1.75e-12!119;CL:0000071!7.44e-12!18;CL:0002546!7.44e-12!18;CL:0000115!2.00e-11!35;CL:0000063!2.19e-10!578;CL:1000413!2.26e-09!9;CL:0000548!2.63e-09!679;CL:0000004!2.63e-09!679;CL:0000255!2.63e-09!679;CL:0000012!5.20e-09!682;CL:0000220!9.82e-07!246|ontology_enrichment_celltype_v019=CL:0000077;1.83e-15;19!CL:0000071;4.54e-14;18!CL:1000413;7.57e-13;9!CL:0000213;6.96e-12;58!CL:0000215;6.96e-12;58!CL:0002139;1.13e-11;24!CL:0000115;1.45e-09;36!CL:0002078;1.56e-08;45!CL:0000076;2.39e-08;63!CL:0002334;3.15e-08;12!CL:0002586;5.37e-08;3!CL:0002580;2.01e-07;3!CL:0002579;6.53e-07;3!CL:0002544;7.52e-07;6|ontology_enrichment_celltype_v019_2=CL:0000213,8.04e-26,58;CL:0000215,8.04e-26,58;CL:0000076,1.27e-16,63;CL:0000077,1.77e-15,19;CL:0000066,3.39e-15,253;CL:0000071,4.94e-14,18;CL:0002546,4.94e-14,18;CL:1000413,8.73e-13,9;CL:0002078,6.12e-12,45;CL:0002139,1.22e-11,24;CL:0000115,5.26e-11,36;CL:0000222,1.20e-10,121;CL:0002334,3.71e-08,12;CL:0002586,4.32e-08,3;CL:0002580,2.09e-07,3;CL:0002544,8.14e-07,6;CL:0002579,8.37e-07,3|ontology_enrichment_development_v019=CL:0002546;4.54e-14;18!UBERON:0007123;5.70e-08;5|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0006914!4.80e-14!25;UBERON:0000487!1.68e-13!22;UBERON:0001986!7.44e-12!18;UBERON:0004638!7.44e-12!18;UBERON:0004852!7.44e-12!18;UBERON:0007625!1.35e-09!11;UBERON:0003915!2.26e-09!9;UBERON:0004700!2.26e-09!9;UBERON:0001917!2.26e-09!9;UBERON:0002049!2.94e-09!79;UBERON:0007798!2.94e-09!79;UBERON:0001048!3.15e-09!168;UBERON:0003914!5.80e-09!118;UBERON:0000477!8.72e-09!286;UBERON:0003886!6.89e-08!63;UBERON:0000063!9.35e-08!97;UBERON:0004872!3.96e-07!84;UBERON:0000055!4.31e-07!69;UBERON:0004535!9.29e-07!110|ontology_enrichment_uberon_v019=UBERON:0006914;3.83e-20;25!UBERON:0000487;3.98e-18;22!UBERON:0007625;4.13e-16;11!UBERON:0000490;1.29e-15;33!UBERON:0004638;4.54e-14;18!UBERON:0001986;4.54e-14;18!UBERON:0004852;4.54e-14;18!UBERON:0003915;7.57e-13;9!UBERON:0004700;7.57e-13;9!UBERON:0001917;7.57e-13;9!UBERON:0000019;1.69e-08;19!UBERON:0000047;1.69e-08;19!UBERON:0004088;1.69e-08;19!UBERON:0010230;1.69e-08;19!UBERON:0000020;3.54e-08;23!UBERON:0001781;5.37e-08;3!UBERON:0001782;5.37e-08;3!UBERON:0000970;5.57e-08;20!UBERON:0002046;5.70e-08;5!UBERON:0004457;7.01e-08;9!UBERON:0000042;7.01e-08;9!UBERON:0001032;9.55e-08;24!UBERON:0004456;9.55e-08;24!UBERON:0002104;1.64e-07;21!UBERON:0001456;1.64e-07;21|ontology_enrichment_uberon_v019_2=UBERON:0006914,5.62e-20,25;UBERON:0000487,4.56e-18,22;UBERON:0007625,2.41e-16,11;UBERON:0004638,4.94e-14,18;UBERON:0001986,4.94e-14,18;UBERON:0004852,4.94e-14,18;UBERON:0003915,8.73e-13,9;UBERON:0004700,8.73e-13,9;UBERON:0001917,8.73e-13,9;UBERON:0000019,4.26e-08,20;UBERON:0000047,4.26e-08,20;UBERON:0010312,4.26e-08,20;UBERON:0004088,4.26e-08,20;UBERON:0010230,4.26e-08,20;UBERON:0003072,4.26e-08,20;UBERON:0004128,4.26e-08,20;UBERON:0003071,4.26e-08,20;UBERON:0001782,4.32e-08,3;UBERON:0005424,4.32e-08,3;UBERON:0002046,5.18e-08,5;UBERON:0004117,5.18e-08,5;UBERON:0007689,5.18e-08,5;UBERON:0007123,5.18e-08,5;UBERON:0003091,5.18e-08,5;UBERON:0000020,6.49e-08,24;UBERON:0001032,6.49e-08,24;UBERON:0004456,6.49e-08,24;UBERON:0000970,1.27e-07,21;UBERON:0002104,1.27e-07,21;UBERON:0001456,3.43e-07,22|phase1_expression=1.45342703416445,0.428201047781966,0.704772020479856,2.00146596706261,0.893922188854576,2.61701557230111,0,0,0,3.44027511102112,13.2582221914761,1.52908960491121,2.63766978228454,0,0.331397375727916,0,0,0,0,0.369363174230364,0.612002073732759,0.313454721478088,0.286235987131057,0,0.125542639594803,0,0,0,0,0,0,0,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.15076305659177,1.80719576192283,1.50401373190767,3.47631645505977,0,0.486634870302636,0.756278537312543,3.54767035940102,2.81071314218003,0.0654895377488563,0,0,0,0,0,0,0,0,0.39752481473341,3.4409383804245,3.12426451446835,4.52246353539208,10.9069853414576,11.5549577614828,2.29894463190492,0.775250277507987,0.35576626268671,1.33888245105868,4.02829317109147,1.52054421143703,0.976248230192678,0.367663080345869,18.6332648012805,0.0892997282840798,0.22452937262617,0,4.5994991239765,0,2.19842092716489,0,0,0.436094052142534,1.49091585508596,0.12663051166458,0,0.286836620748814,0.354668382198357,3.36406560085384,4.2699598291882,3.94668077467456,0,0.5388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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=3855 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6445 | |||
|TSSclassifier=S | |||
|UniProt=P08729 | |||
|association_with_transcript=-299bp_to_ENST00000331817_5end | |||
|coexpression_cluster_id=C3290 | |||
|description=CAGE_peak_8_at_KRT7_5end | |||
|id=chr12:52626580..52626598,+ | |||
|ontology_enrichment_celltype=CL:0000066!6.71e-24!254;CL:0000213!3.94e-23!57;CL:0000215!3.94e-23!57;CL:0002139!4.48e-15!24;CL:0002078!1.92e-14!44;CL:0000076!4.32e-14!62;CL:0000077!6.89e-13!19;CL:0000222!1.75e-12!119;CL:0000071!7.44e-12!18;CL:0002546!7.44e-12!18;CL:0000115!2.00e-11!35;CL:0000063!2.19e-10!578;CL:1000413!2.26e-09!9;CL:0000548!2.63e-09!679;CL:0000004!2.63e-09!679;CL:0000255!2.63e-09!679;CL:0000012!5.20e-09!682;CL:0000220!9.82e-07!246 | |||
|ontology_enrichment_celltype_v019=CL:0000077;1.83e-15;19!CL:0000071;4.54e-14;18!CL:1000413;7.57e-13;9!CL:0000213;6.96e-12;58!CL:0000215;6.96e-12;58!CL:0002139;1.13e-11;24!CL:0000115;1.45e-09;36!CL:0002078;1.56e-08;45!CL:0000076;2.39e-08;63!CL:0002334;3.15e-08;12!CL:0002586;5.37e-08;3!CL:0002580;2.01e-07;3!CL:0002579;6.53e-07;3!CL:0002544;7.52e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000213,8.04e-26,58;CL:0000215,8.04e-26,58;CL:0000076,1.27e-16,63;CL:0000077,1.77e-15,19;CL:0000066,3.39e-15,253;CL:0000071,4.94e-14,18;CL:0002546,4.94e-14,18;CL:1000413,8.73e-13,9;CL:0002078,6.12e-12,45;CL:0002139,1.22e-11,24;CL:0000115,5.26e-11,36;CL:0000222,1.20e-10,121;CL:0002334,3.71e-08,12;CL:0002586,4.32e-08,3;CL:0002580,2.09e-07,3;CL:0002544,8.14e-07,6;CL:0002579,8.37e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002546;4.54e-14;18!UBERON:0007123;5.70e-08;5 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0006914!4.80e-14!25;UBERON:0000487!1.68e-13!22;UBERON:0001986!7.44e-12!18;UBERON:0004638!7.44e-12!18;UBERON:0004852!7.44e-12!18;UBERON:0007625!1.35e-09!11;UBERON:0003915!2.26e-09!9;UBERON:0004700!2.26e-09!9;UBERON:0001917!2.26e-09!9;UBERON:0002049!2.94e-09!79;UBERON:0007798!2.94e-09!79;UBERON:0001048!3.15e-09!168;UBERON:0003914!5.80e-09!118;UBERON:0000477!8.72e-09!286;UBERON:0003886!6.89e-08!63;UBERON:0000063!9.35e-08!97;UBERON:0004872!3.96e-07!84;UBERON:0000055!4.31e-07!69;UBERON:0004535!9.29e-07!110 | |||
|ontology_enrichment_uberon_v019=UBERON:0006914;3.83e-20;25!UBERON:0000487;3.98e-18;22!UBERON:0007625;4.13e-16;11!UBERON:0000490;1.29e-15;33!UBERON:0004638;4.54e-14;18!UBERON:0001986;4.54e-14;18!UBERON:0004852;4.54e-14;18!UBERON:0003915;7.57e-13;9!UBERON:0004700;7.57e-13;9!UBERON:0001917;7.57e-13;9!UBERON:0000019;1.69e-08;19!UBERON:0000047;1.69e-08;19!UBERON:0004088;1.69e-08;19!UBERON:0010230;1.69e-08;19!UBERON:0000020;3.54e-08;23!UBERON:0001781;5.37e-08;3!UBERON:0001782;5.37e-08;3!UBERON:0000970;5.57e-08;20!UBERON:0002046;5.70e-08;5!UBERON:0004457;7.01e-08;9!UBERON:0000042;7.01e-08;9!UBERON:0001032;9.55e-08;24!UBERON:0004456;9.55e-08;24!UBERON:0002104;1.64e-07;21!UBERON:0001456;1.64e-07;21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006914,5.62e-20,25;UBERON:0000487,4.56e-18,22;UBERON:0007625,2.41e-16,11;UBERON:0004638,4.94e-14,18;UBERON:0001986,4.94e-14,18;UBERON:0004852,4.94e-14,18;UBERON:0003915,8.73e-13,9;UBERON:0004700,8.73e-13,9;UBERON:0001917,8.73e-13,9;UBERON:0000019,4.26e-08,20;UBERON:0000047,4.26e-08,20;UBERON:0010312,4.26e-08,20;UBERON:0004088,4.26e-08,20;UBERON:0010230,4.26e-08,20;UBERON:0003072,4.26e-08,20;UBERON:0004128,4.26e-08,20;UBERON:0003071,4.26e-08,20;UBERON:0001782,4.32e-08,3;UBERON:0005424,4.32e-08,3;UBERON:0002046,5.18e-08,5;UBERON:0004117,5.18e-08,5;UBERON:0007689,5.18e-08,5;UBERON:0007123,5.18e-08,5;UBERON:0003091,5.18e-08,5;UBERON:0000020,6.49e-08,24;UBERON:0001032,6.49e-08,24;UBERON:0004456,6.49e-08,24;UBERON:0000970,1.27e-07,21;UBERON:0002104,1.27e-07,21;UBERON:0001456,3.43e-07,22 | |||
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| |||
|short_description=p8@KRT7 | |||
}} |
Revision as of 23:07, 10 September 2013
Short description: | p8@KRT7 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_8_at_KRT7_5end |
Coexpression cluster: | C3290_Endothelial_Retinal_Alveolar_thyroid_papillary_anaplastic_Ciliary |
Association with transcript: | -299bp_to_ENST00000331817_5end |
EntrezGene: | KRT7 |
HGNC: | 6445 |
UniProt: | P08729 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lining cell | 8.04e-26 | 58 |
barrier cell | 8.04e-26 | 58 |
squamous epithelial cell | 1.27e-16 | 63 |
mesothelial cell | 1.77e-15 | 19 |
epithelial cell | 3.39e-15 | 253 |
blood vessel endothelial cell | 4.94e-14 | 18 |
embryonic blood vessel endothelial progenitor cell | 4.94e-14 | 18 |
endothelial cell of artery | 8.73e-13 | 9 |
meso-epithelial cell | 6.12e-12 | 45 |
endothelial cell of vascular tree | 1.22e-11 | 24 |
endothelial cell | 5.26e-11 | 36 |
mesodermal cell | 1.20e-10 | 121 |
preadipocyte | 3.71e-08 | 12 |
retinal pigment epithelial cell | 4.32e-08 | 3 |
preadipocyte of the breast | 2.09e-07 | 3 |
aortic endothelial cell | 8.14e-07 | 6 |
omentum preadipocyte | 8.37e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
squamous epithelium | 5.62e-20 | 25 |
simple squamous epithelium | 4.56e-18 | 22 |
pigment epithelium of eye | 2.41e-16 | 11 |
blood vessel endothelium | 4.94e-14 | 18 |
endothelium | 4.94e-14 | 18 |
cardiovascular system endothelium | 4.94e-14 | 18 |
endothelial tube | 8.73e-13 | 9 |
arterial system endothelium | 8.73e-13 | 9 |
endothelium of artery | 8.73e-13 | 9 |
camera-type eye | 4.26e-08 | 20 |
simple eye | 4.26e-08 | 20 |
immature eye | 4.26e-08 | 20 |
ocular region | 4.26e-08 | 20 |
eyeball of camera-type eye | 4.26e-08 | 20 |
optic cup | 4.26e-08 | 20 |
optic vesicle | 4.26e-08 | 20 |
eye primordium | 4.26e-08 | 20 |
pigmented layer of retina | 4.32e-08 | 3 |
presumptive retinal pigmented epithelium | 4.32e-08 | 3 |
thyroid gland | 5.18e-08 | 5 |
pharyngeal pouch | 5.18e-08 | 5 |
thyroid diverticulum | 5.18e-08 | 5 |
pharyngeal pouch 2 | 5.18e-08 | 5 |
thyroid primordium | 5.18e-08 | 5 |
sense organ | 6.49e-08 | 24 |
sensory system | 6.49e-08 | 24 |
entire sense organ system | 6.49e-08 | 24 |
eye | 1.27e-07 | 21 |
visual system | 1.27e-07 | 21 |
face | 3.43e-07 | 22 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.