FFCP PHASE1:Hg19::chr13:108518986..108519018,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=728215|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=33877|TSSclassifier=S|UniProt=B1AL88|association_with_transcript=64bp_to_ENST00000375915_5end|description=CAGE_peak_5_at_FAM155A_5end|id=chr13:108518986..108519018,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0002622;4.50e-10;3!CL:0002553;1.09e-08;1!CL:0000313;3.56e-08;1!CL:0002539;8.61e-07;10|ontology_enrichment_celltype_v019_2=CL:0002622,8.94e-10,3;CL:0002553,1.13e-08,1;CL:0000313,3.33e-08,1;CL:0002539,8.54e-07,10|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:2394!3.56e-09!14|ontology_enrichment_disease_v019=DOID:2152;3.56e-08;1|ontology_enrichment_disease_v019_2=DOID:2152,3.33e-08,1|ontology_enrichment_uberon=UBERON:0000073!1.12e-13!94;UBERON:0001016!1.12e-13!94;UBERON:0001017!5.46e-12!82;UBERON:0005743!1.29e-11!86;UBERON:0001049!9.84e-11!57;UBERON:0005068!9.84e-11!57;UBERON:0006241!9.84e-11!57;UBERON:0007135!9.84e-11!57;UBERON:0000955!8.72e-10!69;UBERON:0006238!8.72e-10!69;UBERON:0001893!9.87e-09!34;UBERON:0002619!1.19e-08!22;UBERON:0002780!1.45e-08!41;UBERON:0001890!1.45e-08!41;UBERON:0006240!1.45e-08!41;UBERON:0002616!2.15e-08!59;UBERON:0000956!2.30e-08!25;UBERON:0000203!2.30e-08!25;UBERON:0001950!2.52e-08!20;UBERON:0003080!3.15e-08!42;UBERON:0002791!5.12e-08!33;UBERON:0004111!6.76e-08!241;UBERON:0003075!6.95e-08!86;UBERON:0007284!6.95e-08!86;UBERON:0000025!7.23e-08!194;UBERON:0001869!1.04e-07!32;UBERON:0002020!1.08e-07!34;UBERON:0003528!1.08e-07!34;UBERON:0002346!3.75e-07!90;UBERON:0003056!7.14e-07!61;UBERON:0000992!8.25e-07!13|ontology_enrichment_uberon_v019=UBERON:0000007;4.15e-15;2!UBERON:0001282;3.56e-08;1!UBERON:0004911;3.56e-08;1!UBERON:0009842;3.56e-08;1!UBERON:0003704;3.56e-08;1!UBERON:0001171;3.56e-08;1!UBERON:0001172;3.56e-08;1!UBERON:0003296;5.43e-08;4!UBERON:0010133;5.43e-08;4!UBERON:0004237;8.61e-07;10!UBERON:0004695;8.61e-07;10!UBERON:0002111;8.61e-07;10!UBERON:0004178;8.61e-07;10|ontology_enrichment_uberon_v019_2=UBERON:0000007,2.20e-15,2;UBERON:0005153,2.06e-08,37;UBERON:0001282,2.50e-08,1;UBERON:0009842,2.50e-08,1;UBERON:0003704,2.50e-08,1;UBERON:0001171,2.50e-08,1;UBERON:0001172,2.50e-08,1;UBERON:0004911,3.33e-08,1;UBERON:0003296,3.97e-08,4;UBERON:0010133,3.97e-08,4;UBERON:0004237,8.54e-07,10;UBERON:0004695,8.54e-07,10;UBERON:0002111,8.54e-07,10;UBERON:0004178,8.54e-07,10|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.602694528023977,0,0.487932798790507,0,0,0,0.286235987131057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275118041940067,0,0,0.35576626268671,0.33472061276467,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0,1.72131935057184,0,0,0,0,0,0,0.134710672069688,0.163461903113459,0,0,0,0,0,0,0,0,0,0,0.245668634623536,0.206651562351531,0,0,0,0,0,0.125118519871964,0.277064115484183,0,0,0,0,0,0,0,0,0,0.257640540045629,0.18611685633159,0,0,0,0,0,0,0.10075209822764,0,0,0,0,0.243947412259191,0.265059536642971,0.232387885739037,0,0,0.36497735907583,1.56449532329816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0.858486162094873,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.904902010304444,0,0,0.26593811658487,0,0,0,0,0,0.542621605391443,0,0,0,0,1.80863626235752,0,1.49959486773086,0,0,0,0,0,0,0.289562613335158,0,0,0,0,0,0,0.508189248444927,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0.601892199455438,0,0,0,0.184369168541703,0,0,0,0,0,0,0,0,0,0,0.306923946576125,0,0.128139149255701,0.511707249066704,0,0,0.154209693802656,0.177561725313127,0,0,0.116210378459959,0,0,0,1.03333003348146,0,1.18011973463482,0.451199612907412,0.0770153371044148,0,0,0.105551628892876,0,0,0.215915916102139,0,0,0,0,0,0.223874754722178,0,0,0,0,0,0,0,0,0,0,0,0.096670718292122,0,0,0,0,0,0,0,0,0,0,0,1.39453664789186,2.83331112147576,1.3940745403212,0,0,0,0,0,0,0,0,0,0,0.95460974377781,0,0.179872457583315,0.274537029736055,0.235624804691373,0,0,0,0,0,0,1.36499911407986,0.989838023675989,0,0,0,0.438450885253763,0,0,0.811641507850816,0,0,0.143411352204052,0.0982490410131212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278406173895242,0,0,0,0,0,0,0,0,0,0,0,0,0,0.562677665642051,0.222617410045812,0,0,0,0,0,0,0,0.622079175323615,0.449341755736634,0,0,0,0,0,0,0.185536196323703,1.99613798001194,0,0,0,0,0,0,0,0,0.347249989866585,0,0,0,0.552896299656123,0.295547618953547,0.438770794307945,0,0,0,1.70913083770502,0,0,0,0,0,0,0,0,0,0,0,0,0.37950746544837,0,0,0,0,0,0,0,0,0,0,0.208843899010911,0.067401132980677,0,0,0,0,0,0,0,0,0,0,0,0,0,0.627865836814451,0,0.284609546029793,0,0,0,0,0,0,0,0,0,0,0,1.12990370390266,0.411125773940253,0.19871461170299,0.0633107959558787,0.195551382734803,0,0.213452994739353,0.19980960958213,0,0,0,0,0.124252535565433,0,0,0.104602846312333,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0.360299883542404,0,0,0,0,0,0,0,0.544813624446302,0.160753148465019,0.137539436597234,0,0,0,0.425246896606173,0,0,0.0524545881349981,0.211200673038813,2.15144807199414,0,0,0,0,1.08599920350743,0.864221491201268,0.326587360109409,0,0,0.511164065356265,0,0,0,0,0.13223260174269,0,0,0,1.72924735609633,0,0,0,0,0,0,0,0,0,0,0,0.366078794705889,0.500763722825999,0,0.221858103073705,0.310482014706917,4.42715631795939,0,0,0,0,0,0,0,0,0,0.189403005275089,0,0,0.228840068396924,0,0,0,0.159296767163702,0.449803112163605,0.155262956876259,0,0.265841714557995,0,0.150257608997218,2.28483127301277,0.813741466409323,0.181848659202559,0.966695013382396,0,0.796191777397232,0,0,0.336749488765919,0,0,0,0,0.226705925512272,0.231522474323834,0,0,0,0.219284049578707,0.706756583783524,0,0,0.76872455576384,0,0,0.276516872303462,0,0,0,0,0,0.845248493434508,0,0,0,0,0,0,0,0.255788742607303,1.07824811396682,0,2.18419276384028,0,0,0,0,0,0,4.00285374142735,0,1.2249819094128,0.385375350578757,0,0.319267718114302,0.205116364240755,0,0.138314504928436,0,0,0,0,0,0,0,0,0,0,0,0,0,0.655087670040387,0.591424344868181,0.405225507710368,0,0.826747186004736,0.380494861163441,0.546974809018219,0,0,0,0.127762427639595,0,0,1.82089681270989,3.64259506162076,0,0,0,0.203909198930495,0.328863867814245,0,0,0.078493092850514,0,0,0,0,0,0.0714765441766563,0.47404083519818,0,0,0,0,0,0,0,0.473328002922261,0.170426809518315,0,0,0,0,1.4541206133713,0,1.21917924982269,0,0,0,0,1.16969731731053,0,0,0,0,5.1327366812669,0,0,0,0,0.471353094203252,0.196308467114945,0,0.4226557275834,0.339854229375634,0,0,0,0,0,0,0,0,0.143339583151451,0,0.0679914901909147,0.436350690340377,0,0,0,0,0,0,0.126698501011437,0,0.26721740526556,1.56221329209236,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0673520530145875,0,0,0.244209805832924,0,0,0,0,0,0,0,0,0|short_description=p5@FAM155A}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=728215 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=33877 | |||
|TSSclassifier=S | |||
|UniProt=B1AL88 | |||
|association_with_transcript=64bp_to_ENST00000375915_5end | |||
|description=CAGE_peak_5_at_FAM155A_5end | |||
|id=chr13:108518986..108519018,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002622;4.50e-10;3!CL:0002553;1.09e-08;1!CL:0000313;3.56e-08;1!CL:0002539;8.61e-07;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0002622,8.94e-10,3;CL:0002553,1.13e-08,1;CL:0000313,3.33e-08,1;CL:0002539,8.54e-07,10 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!3.56e-09!14 | |||
|ontology_enrichment_disease_v019=DOID:2152;3.56e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:2152,3.33e-08,1 | |||
|ontology_enrichment_uberon=UBERON:0000073!1.12e-13!94;UBERON:0001016!1.12e-13!94;UBERON:0001017!5.46e-12!82;UBERON:0005743!1.29e-11!86;UBERON:0001049!9.84e-11!57;UBERON:0005068!9.84e-11!57;UBERON:0006241!9.84e-11!57;UBERON:0007135!9.84e-11!57;UBERON:0000955!8.72e-10!69;UBERON:0006238!8.72e-10!69;UBERON:0001893!9.87e-09!34;UBERON:0002619!1.19e-08!22;UBERON:0002780!1.45e-08!41;UBERON:0001890!1.45e-08!41;UBERON:0006240!1.45e-08!41;UBERON:0002616!2.15e-08!59;UBERON:0000956!2.30e-08!25;UBERON:0000203!2.30e-08!25;UBERON:0001950!2.52e-08!20;UBERON:0003080!3.15e-08!42;UBERON:0002791!5.12e-08!33;UBERON:0004111!6.76e-08!241;UBERON:0003075!6.95e-08!86;UBERON:0007284!6.95e-08!86;UBERON:0000025!7.23e-08!194;UBERON:0001869!1.04e-07!32;UBERON:0002020!1.08e-07!34;UBERON:0003528!1.08e-07!34;UBERON:0002346!3.75e-07!90;UBERON:0003056!7.14e-07!61;UBERON:0000992!8.25e-07!13 | |||
|ontology_enrichment_uberon_v019=UBERON:0000007;4.15e-15;2!UBERON:0001282;3.56e-08;1!UBERON:0004911;3.56e-08;1!UBERON:0009842;3.56e-08;1!UBERON:0003704;3.56e-08;1!UBERON:0001171;3.56e-08;1!UBERON:0001172;3.56e-08;1!UBERON:0003296;5.43e-08;4!UBERON:0010133;5.43e-08;4!UBERON:0004237;8.61e-07;10!UBERON:0004695;8.61e-07;10!UBERON:0002111;8.61e-07;10!UBERON:0004178;8.61e-07;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000007,2.20e-15,2;UBERON:0005153,2.06e-08,37;UBERON:0001282,2.50e-08,1;UBERON:0009842,2.50e-08,1;UBERON:0003704,2.50e-08,1;UBERON:0001171,2.50e-08,1;UBERON:0001172,2.50e-08,1;UBERON:0004911,3.33e-08,1;UBERON:0003296,3.97e-08,4;UBERON:0010133,3.97e-08,4;UBERON:0004237,8.54e-07,10;UBERON:0004695,8.54e-07,10;UBERON:0002111,8.54e-07,10;UBERON:0004178,8.54e-07,10 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.602694528023977,0,0.487932798790507,0,0,0,0.286235987131057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275118041940067,0,0,0.35576626268671,0.33472061276467,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0,1.72131935057184,0,0,0,0,0,0,0.134710672069688,0.163461903113459,0,0,0,0,0,0,0,0,0,0,0.245668634623536,0.206651562351531,0,0,0,0,0,0.125118519871964,0.277064115484183,0,0,0,0,0,0,0,0,0,0.257640540045629,0.18611685633159,0,0,0,0,0,0,0.10075209822764,0,0,0,0,0.243947412259191,0.265059536642971,0.232387885739037,0,0,0.36497735907583,1.56449532329816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0.858486162094873,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.904902010304444,0,0,0.26593811658487,0,0,0,0,0,0.542621605391443,0,0,0,0,1.80863626235752,0,1.49959486773086,0,0,0,0,0,0,0.289562613335158,0,0,0,0,0,0,0.508189248444927,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0.601892199455438,0,0,0,0.184369168541703,0,0,0,0,0,0,0,0,0,0,0.306923946576125,0,0.128139149255701,0.511707249066704,0,0,0.154209693802656,0.177561725313127,0,0,0.116210378459959,0,0,0,1.03333003348146,0,1.18011973463482,0.451199612907412,0.0770153371044148,0,0,0.105551628892876,0,0,0.215915916102139,0,0,0,0,0,0.223874754722178,0,0,0,0,0,0,0,0,0,0,0,0.096670718292122,0,0,0,0,0,0,0,0,0,0,0,1.39453664789186,2.83331112147576,1.3940745403212,0,0,0,0,0,0,0,0,0,0,0.95460974377781,0,0.179872457583315,0.274537029736055,0.235624804691373,0,0,0,0,0,0,1.36499911407986,0.989838023675989,0,0,0,0.438450885253763,0,0,0.811641507850816,0,0,0.143411352204052,0.0982490410131212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278406173895242,0,0,0,0,0,0,0,0,0,0,0,0,0,0.562677665642051,0.222617410045812,0,0,0,0,0,0,0,0.622079175323615,0.449341755736634,0,0,0,0,0,0,0.185536196323703,1.99613798001194,0,0,0,0,0,0,0,0,0.347249989866585,0,0,0,0.552896299656123,0.295547618953547,0.438770794307945,0,0,0,1.70913083770502,0,0,0,0,0,0,0,0,0,0,0,0,0.37950746544837,0,0,0,0,0,0,0,0,0,0,0.208843899010911,0.067401132980677,0,0,0,0,0,0,0,0,0,0,0,0,0,0.627865836814451,0,0.284609546029793,0,0,0,0,0,0,0,0,0,0,0,1.12990370390266,0.411125773940253,0.19871461170299,0.0633107959558787,0.195551382734803,0,0.213452994739353,0.19980960958213,0,0,0,0,0.124252535565433,0,0,0.104602846312333,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0.360299883542404,0,0,0,0,0,0,0,0.544813624446302,0.160753148465019,0.137539436597234,0,0,0,0.425246896606173,0,0,0.0524545881349981,0.211200673038813,2.15144807199414,0,0,0,0,1.08599920350743,0.864221491201268,0.326587360109409,0,0,0.511164065356265,0,0,0,0,0.13223260174269,0,0,0,1.72924735609633,0,0,0,0,0,0,0,0,0,0,0,0.366078794705889,0.500763722825999,0,0.221858103073705,0.310482014706917,4.42715631795939,0,0,0,0,0,0,0,0,0,0.189403005275089,0,0,0.228840068396924,0,0,0,0.159296767163702,0.449803112163605,0.155262956876259,0,0.265841714557995,0,0.150257608997218,2.28483127301277,0.813741466409323,0.181848659202559,0.966695013382396,0,0.796191777397232,0,0,0.336749488765919,0,0,0,0,0.226705925512272,0.231522474323834,0,0,0,0.219284049578707,0.706756583783524,0,0,0.76872455576384,0,0,0.276516872303462,0,0,0,0,0,0.845248493434508,0,0,0,0,0,0,0,0.255788742607303,1.07824811396682,0,2.18419276384028,0,0,0,0,0,0,4.00285374142735,0,1.2249819094128,0.385375350578757,0,0.319267718114302,0.205116364240755,0,0.138314504928436,0,0,0,0,0,0,0,0,0,0,0,0,0,0.655087670040387,0.591424344868181,0.405225507710368,0,0.826747186004736,0.380494861163441,0.546974809018219,0,0,0,0.127762427639595,0,0,1.82089681270989,3.64259506162076,0,0,0,0.203909198930495,0.328863867814245,0,0,0.078493092850514,0,0,0,0,0,0.0714765441766563,0.47404083519818,0,0,0,0,0,0,0,0.473328002922261,0.170426809518315,0,0,0,0,1.4541206133713,0,1.21917924982269,0,0,0,0,1.16969731731053,0,0,0,0,5.1327366812669,0,0,0,0,0.471353094203252,0.196308467114945,0,0.4226557275834,0.339854229375634,0,0,0,0,0,0,0,0,0.143339583151451,0,0.0679914901909147,0.436350690340377,0,0,0,0,0,0,0.126698501011437,0,0.26721740526556,1.56221329209236,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0673520530145875,0,0,0.244209805832924,0,0,0,0,0,0,0,0,0 | |||
|short_description=p5@FAM155A | |||
}} |
Revision as of 01:24, 11 September 2013
Short description: | p5@FAM155A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_FAM155A_5end |
Coexpression cluster: | NA |
Association with transcript: | 64bp_to_ENST00000375915_5end |
EntrezGene: | FAM155A |
HGNC: | 33877 |
UniProt: | B1AL88 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
prostate stromal cell | 8.94e-10 | 3 |
lung fibroblast | 1.13e-08 | 1 |
serous secreting cell | 3.33e-08 | 1 |
aortic smooth muscle cell | 8.54e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
pituitary gland | 2.20e-15 | 2 |
epithelial bud | 2.06e-08 | 37 |
intralobular bile duct | 2.50e-08 | 1 |
acinus | 2.50e-08 | 1 |
intrahepatic bile duct | 2.50e-08 | 1 |
portal lobule | 2.50e-08 | 1 |
hepatic acinus | 2.50e-08 | 1 |
epithelium of female gonad | 3.33e-08 | 1 |
gland of diencephalon | 3.97e-08 | 4 |
neuroendocrine gland | 3.97e-08 | 4 |
blood vessel smooth muscle | 8.54e-07 | 10 |
arterial system smooth muscle | 8.54e-07 | 10 |
artery smooth muscle tissue | 8.54e-07 | 10 |
aorta smooth muscle tissue | 8.54e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
ovary epithelial cancer | 3.33e-08 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.