FFCP PHASE1:Hg19::chr15:34629706..34629743,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=9990|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=10914|TSSclassifier=W|UniProt=|association_with_transcript=199bp_to_ENST00000559484_5end|coexpression_cluster_id=C2|description=CAGE_peak_11_at_SLC12A6_5end|id=chr15:34629706..34629743,-|ontology_enrichment_celltype=CL:0002057!4.49e-37!42;CL:0000860!3.51e-36!45;CL:0000766!1.34e-34!76;CL:0000738!1.60e-30!140;CL:0002194!1.11e-29!63;CL:0000576!1.11e-29!63;CL:0000040!1.11e-29!63;CL:0000559!1.11e-29!63;CL:0002087!4.39e-29!119;CL:0000037!2.24e-28!172;CL:0000566!2.24e-28!172;CL:0002009!3.49e-28!65;CL:0002032!6.19e-28!165;CL:0000837!6.19e-28!165;CL:0000839!2.31e-27!70;CL:0000988!7.94e-27!182;CL:0000557!1.05e-26!71;CL:0000763!1.41e-26!112;CL:0000049!1.41e-26!112;CL:0002031!1.31e-25!124;CL:0002393!4.04e-08!9;CL:0002397!4.04e-08!9;CL:0000094!2.43e-07!8|ontology_enrichment_celltype_v019=CL:0000860;7.83e-39;33!CL:0002057;7.83e-39;33!CL:0000473;6.44e-30;39!CL:0000234;6.44e-30;39!CL:0000576;1.45e-22;48!CL:0000766;2.68e-22;69!CL:0000775;6.67e-13;3!CL:0000094;1.45e-12;8!CL:0000763;1.87e-09;100!CL:0000771;3.62e-09;2!CL:0000081;5.05e-09;11!CL:0002087;3.03e-08;104!CL:0000738;1.33e-07;136|ontology_enrichment_celltype_v019_2=CL:0000860,1.05e-43,42;CL:0002057,1.05e-43,42;CL:0000766,6.65e-41,72;CL:0000473,9.15e-41,48;CL:0000234,9.15e-41,48;CL:0002194,2.54e-31,59;CL:0000576,2.54e-31,59;CL:0000040,2.54e-31,59;CL:0000559,2.54e-31,59;CL:0002009,4.19e-30,61;CL:0000839,5.77e-30,66;CL:0000557,2.00e-29,67;CL:0000763,1.18e-28,108;CL:0000049,1.18e-28,108;CL:0000738,3.53e-24,136;CL:0002032,5.55e-22,161;CL:0000837,5.55e-22,161;CL:0000037,1.06e-20,168;CL:0002031,3.09e-19,120;CL:0000988,3.31e-19,177;CL:0002087,9.87e-19,115;CL:0000775,6.73e-13,3;CL:0000094,1.46e-12,8;CL:0000771,3.64e-09,2;CL:0000081,5.07e-09,11|ontology_enrichment_development_v019=CL:0002057;4.92e-31;42!CL:0000049;2.41e-07;108|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!5.14e-32!102;UBERON:0003061!5.14e-32!102;UBERON:0002193!6.99e-27!112;UBERON:0002371!8.37e-23!80;UBERON:0001474!3.83e-22!86;UBERON:0004765!6.48e-17!101;UBERON:0001434!6.48e-17!101;UBERON:0002405!7.24e-15!115;UBERON:0003081!1.85e-10!216;UBERON:0000178!4.19e-08!15;UBERON:0000179!4.19e-08!15;UBERON:0000463!4.19e-08!15|ontology_enrichment_uberon_v019=UBERON:0000178;1.65e-15;15!UBERON:0000179;1.65e-15;15!UBERON:0000463;1.65e-15;15|ontology_enrichment_uberon_v019_2=UBERON:0002390,8.74e-35,98;UBERON:0003061,8.74e-35,98;UBERON:0002193,8.19e-31,108;UBERON:0002371,3.27e-25,76;UBERON:0001474,6.10e-25,82;UBERON:0004765,3.77e-22,90;UBERON:0002405,1.81e-19,93;UBERON:0001434,2.74e-19,100;UBERON:0000178,1.72e-15,15;UBERON:0000179,1.72e-15,15;UBERON:0000463,1.72e-15,15;UBERON:0003081,1.34e-13,203;UBERON:0002204,6.42e-10,167|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0,0.136874425072884,0,0.0764134057479513,0.492603536699674,0.236132343941038,0.393364276848904,0,0.928896739896456,0,0,0,0,0.142169232487422,0,1.10799081706375,1.00272223735071,1.51907609501096,0,0,0.257575567634187,2.32637182047304,3.77875943688809,0.727752183563449,0.464858073811369,1.6446715520873,1.85823822537062,1.7261543539329,0.768482119587302,3.07426898855161,1.37898272294647,3.87290810150296,2.70852973188684,1.50593871634084,1.63743690034707,1.34834090667051,1.53041946185451,1.92557416245656,1.27867425159808,1.9791078011203,0.997318288108159,1.70489900213078,0.870627715885752,0.56738522469114,0.622822248995575,0.75374599577023,0,1.95469960234605,0.605399502633369,2.20966581592539,2.53169909952708,0.633765858935825,0.425208599930087,0.628975936525128,0.673971786878971,0.901061357049038,1.12507910687956,0.285012743741249,0.19891667719909,0.365328307529268,0,0,0,1.70692089026603,1.20118796110804,1.14950487990897,0,0,1.1384259382189,0,0,1.32171328579026,0.560508562981536,0,0,0.786021525498329,0.205601498999509,0.668745981562712,0,0.473447805734733,1.94826728407911,0.222820913770347,0,0.443067789167242,0.812411591295047,0.512365278902701,0.650296737799391,0.164437904603676,0,0,0.14828656316206,0,0,0.679856056185397,0.383220493601921,0,0,0.95569624297229,0,0,0.602300476311091,0,0,0.473554504088034,0,0,0,0,0,0,0,0,0,0,0.795285947051099,0,0,0,0,0.196468613246569,0,0,0.324547393654683,0.696518949197069,0.26591592103773,0.715471872916026,0,0,0,0,0,0,0,0.275118041940067,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0.112611480483322,0,0,0,80.3860546359986,58.1670396222488,0,0,0,0,0,0,0,0,0,0,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.45071417671979,0.113432183160021,0.179389635688862,0,0,0,0,0.257640540045629,0,0,0,0,0.0920498986422993,0,0,0.10075209822764,0,0,0,0,0.121973706129595,0,0,0,0,0.36497735907583,0,0,0,0,0,0,0,0.241011029883482,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.17002132569619,0.297262324577456,0,0,0,0.0895585227028483,0,0,2.46331618947972,0.088048434013226,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=9990 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10914 | |||
|TSSclassifier=W | |||
|UniProt= | |||
|association_with_transcript=199bp_to_ENST00000559484_5end | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_11_at_SLC12A6_5end | |||
|id=chr15:34629706..34629743,- | |||
|ontology_enrichment_celltype=CL:0002057!4.49e-37!42;CL:0000860!3.51e-36!45;CL:0000766!1.34e-34!76;CL:0000738!1.60e-30!140;CL:0002194!1.11e-29!63;CL:0000576!1.11e-29!63;CL:0000040!1.11e-29!63;CL:0000559!1.11e-29!63;CL:0002087!4.39e-29!119;CL:0000037!2.24e-28!172;CL:0000566!2.24e-28!172;CL:0002009!3.49e-28!65;CL:0002032!6.19e-28!165;CL:0000837!6.19e-28!165;CL:0000839!2.31e-27!70;CL:0000988!7.94e-27!182;CL:0000557!1.05e-26!71;CL:0000763!1.41e-26!112;CL:0000049!1.41e-26!112;CL:0002031!1.31e-25!124;CL:0002393!4.04e-08!9;CL:0002397!4.04e-08!9;CL:0000094!2.43e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0000860;7.83e-39;33!CL:0002057;7.83e-39;33!CL:0000473;6.44e-30;39!CL:0000234;6.44e-30;39!CL:0000576;1.45e-22;48!CL:0000766;2.68e-22;69!CL:0000775;6.67e-13;3!CL:0000094;1.45e-12;8!CL:0000763;1.87e-09;100!CL:0000771;3.62e-09;2!CL:0000081;5.05e-09;11!CL:0002087;3.03e-08;104!CL:0000738;1.33e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.05e-43,42;CL:0002057,1.05e-43,42;CL:0000766,6.65e-41,72;CL:0000473,9.15e-41,48;CL:0000234,9.15e-41,48;CL:0002194,2.54e-31,59;CL:0000576,2.54e-31,59;CL:0000040,2.54e-31,59;CL:0000559,2.54e-31,59;CL:0002009,4.19e-30,61;CL:0000839,5.77e-30,66;CL:0000557,2.00e-29,67;CL:0000763,1.18e-28,108;CL:0000049,1.18e-28,108;CL:0000738,3.53e-24,136;CL:0002032,5.55e-22,161;CL:0000837,5.55e-22,161;CL:0000037,1.06e-20,168;CL:0002031,3.09e-19,120;CL:0000988,3.31e-19,177;CL:0002087,9.87e-19,115;CL:0000775,6.73e-13,3;CL:0000094,1.46e-12,8;CL:0000771,3.64e-09,2;CL:0000081,5.07e-09,11 | |||
|ontology_enrichment_development_v019=CL:0002057;4.92e-31;42!CL:0000049;2.41e-07;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!5.14e-32!102;UBERON:0003061!5.14e-32!102;UBERON:0002193!6.99e-27!112;UBERON:0002371!8.37e-23!80;UBERON:0001474!3.83e-22!86;UBERON:0004765!6.48e-17!101;UBERON:0001434!6.48e-17!101;UBERON:0002405!7.24e-15!115;UBERON:0003081!1.85e-10!216;UBERON:0000178!4.19e-08!15;UBERON:0000179!4.19e-08!15;UBERON:0000463!4.19e-08!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.65e-15;15!UBERON:0000179;1.65e-15;15!UBERON:0000463;1.65e-15;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,8.74e-35,98;UBERON:0003061,8.74e-35,98;UBERON:0002193,8.19e-31,108;UBERON:0002371,3.27e-25,76;UBERON:0001474,6.10e-25,82;UBERON:0004765,3.77e-22,90;UBERON:0002405,1.81e-19,93;UBERON:0001434,2.74e-19,100;UBERON:0000178,1.72e-15,15;UBERON:0000179,1.72e-15,15;UBERON:0000463,1.72e-15,15;UBERON:0003081,1.34e-13,203;UBERON:0002204,6.42e-10,167 | |||
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| |||
|short_description=p11@SLC12A6 | |||
}} |
Revision as of 06:39, 11 September 2013
Short description: | p11@SLC12A6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_11_at_SLC12A6_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | 199bp_to_ENST00000559484_5end |
EntrezGene: | SLC12A6 |
HGNC: | 10914 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.05e-43 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.05e-43 | 42 |
myeloid leukocyte | 6.65e-41 | 72 |
defensive cell | 9.15e-41 | 48 |
phagocyte | 9.15e-41 | 48 |
monopoietic cell | 2.54e-31 | 59 |
monocyte | 2.54e-31 | 59 |
monoblast | 2.54e-31 | 59 |
promonocyte | 2.54e-31 | 59 |
macrophage dendritic cell progenitor | 4.19e-30 | 61 |
myeloid lineage restricted progenitor cell | 5.77e-30 | 66 |
granulocyte monocyte progenitor cell | 2.00e-29 | 67 |
myeloid cell | 1.18e-28 | 108 |
common myeloid progenitor | 1.18e-28 | 108 |
leukocyte | 3.53e-24 | 136 |
hematopoietic oligopotent progenitor cell | 5.55e-22 | 161 |
hematopoietic multipotent progenitor cell | 5.55e-22 | 161 |
hematopoietic stem cell | 1.06e-20 | 168 |
hematopoietic lineage restricted progenitor cell | 3.09e-19 | 120 |
hematopoietic cell | 3.31e-19 | 177 |
nongranular leukocyte | 9.87e-19 | 115 |
neutrophil | 6.73e-13 | 3 |
granulocyte | 1.46e-12 | 8 |
eosinophil | 3.64e-09 | 2 |
blood cell | 5.07e-09 | 11 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 8.74e-35 | 98 |
blood island | 8.74e-35 | 98 |
hemolymphoid system | 8.19e-31 | 108 |
bone marrow | 3.27e-25 | 76 |
bone element | 6.10e-25 | 82 |
skeletal element | 3.77e-22 | 90 |
immune system | 1.81e-19 | 93 |
skeletal system | 2.74e-19 | 100 |
blood | 1.72e-15 | 15 |
haemolymphatic fluid | 1.72e-15 | 15 |
organism substance | 1.72e-15 | 15 |
lateral plate mesoderm | 1.34e-13 | 203 |
musculoskeletal system | 6.42e-10 | 167 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.