FFCP PHASE1:Hg19::chr15:52311464..52311484,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=5597|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=6879|TSSclassifier=S|UniProt=|association_with_transcript=29bp_to_ENST00000558100_5end|coexpression_cluster_id=C17|description=CAGE_peak_4_at_MAPK6_5end|id=chr15:52311464..52311484,+|ontology_enrichment_celltype=CL:0002057!7.15e-26!42;CL:0000766!2.91e-25!76;CL:0000557!1.54e-24!71;CL:0000860!6.61e-24!45;CL:0000839!7.99e-22!70;CL:0002009!3.69e-21!65;CL:0002194!5.44e-20!63;CL:0000576!5.44e-20!63;CL:0000040!5.44e-20!63;CL:0000559!5.44e-20!63;CL:0000763!2.99e-19!112;CL:0000049!2.99e-19!112;CL:0000738!1.95e-18!140;CL:0002031!1.29e-16!124;CL:0000037!2.86e-16!172;CL:0000566!2.86e-16!172;CL:0002032!1.50e-15!165;CL:0000837!1.50e-15!165;CL:0002087!1.36e-14!119;CL:0000988!1.65e-14!182;CL:0000063!5.28e-14!578;CL:0000012!8.48e-12!682;CL:0000134!1.35e-11!358;CL:0000548!4.39e-11!679;CL:0000004!4.39e-11!679;CL:0000255!4.39e-11!679;CL:0002320!2.00e-10!365;CL:0000144!2.62e-09!625;CL:0000219!4.61e-09!390;CL:0000034!4.92e-09!444;CL:0000723!1.42e-08!436;CL:0002371!6.02e-08!591;CL:0000048!6.22e-08!430;CL:0000003!4.42e-07!722|ontology_enrichment_celltype_v019=CL:0000860;2.47e-30;33!CL:0002057;2.47e-30;33!CL:0000576;4.10e-23;48!CL:0000473;1.19e-22;39!CL:0000234;1.19e-22;39!CL:0000766;6.02e-19;69!CL:0002087;3.27e-10;104!CL:0000763;2.65e-08;100!CL:0000738;7.42e-08;136!CL:0002393;5.95e-07;6!CL:0002397;5.95e-07;6|ontology_enrichment_celltype_v019_2=CL:0000766,5.55e-40,72;CL:0000860,7.28e-40,42;CL:0002057,7.28e-40,42;CL:0000557,3.89e-39,67;CL:0000473,2.91e-36,48;CL:0000234,2.91e-36,48;CL:0000738,1.37e-34,136;CL:0000839,1.54e-34,66;CL:0002009,1.05e-33,61;CL:0002194,8.10e-32,59;CL:0000576,8.10e-32,59;CL:0000040,8.10e-32,59;CL:0000559,8.10e-32,59;CL:0002031,2.29e-31,120;CL:0002087,2.02e-28,115;CL:0000037,5.32e-26,168;CL:0000763,9.37e-26,108;CL:0000049,9.37e-26,108;CL:0002032,1.20e-25,161;CL:0000837,1.20e-25,161;CL:0000988,1.32e-24,177;CL:0000134,2.62e-15,354;CL:0002320,3.00e-14,361;CL:0000034,2.27e-12,441;CL:0000723,2.40e-12,433;CL:0000048,3.29e-11,427;CL:0000219,1.18e-10,386;CL:0002393,4.42e-08,9;CL:0002397,4.42e-08,9|ontology_enrichment_development_v019=CL:0002057;7.73e-29;42!CL:0000049;1.42e-07;108|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002371!2.17e-22!80;UBERON:0001474!1.23e-21!86;UBERON:0004765!2.94e-18!101;UBERON:0001434!2.94e-18!101;UBERON:0002390!3.02e-16!102;UBERON:0003061!3.02e-16!102;UBERON:0002405!1.06e-15!115;UBERON:0002193!2.49e-13!112;UBERON:0002384!3.51e-10!375;UBERON:0002204!2.51e-07!167|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.38e-35,76;UBERON:0001474,3.24e-32,82;UBERON:0004765,6.59e-31,90;UBERON:0002390,3.50e-28,98;UBERON:0003061,3.50e-28,98;UBERON:0002405,6.98e-27,93;UBERON:0001434,2.14e-25,100;UBERON:0002193,4.48e-24,108;UBERON:0002384,7.85e-13,371;UBERON:0002204,2.29e-11,167;UBERON:0003081,7.62e-09,203|phase1_expression=1.09007027562334,1.2846031433459,1.40954404095971,2.00146596706261,0.446961094427288,0,2.53299878168311,1.26343974685366,0,0,0,0.218441372130172,0,0.247532705920093,0.331397375727916,0,0,1.46062018077475,0.487932798790507,0.123121058076788,0,0.626909442956176,0.572471974262113,0.273748850145768,0.502170558379211,2.8272960126742,2.21671591514854,2.44003422072406,7.08055698328027,13.0501995353052,11.3015770020735,2.75826367343678,1.204823675113,2.58827807116751,0.0774672005803016,0.568676929949686,0.587200878669695,37.6716877801677,31.6860227002824,26.9093479687656,0,0.32389366601898,0,4.50734540216651,4.91238726795452,7.03493777444667,26.2644811703424,38.2386135860298,35.6162326529369,42.003089279034,39.4487488054815,58.4111107824805,89.2891313107842,76.1671926628915,83.9644216884919,13.1769637679823,16.6472751535286,22.0229014756183,56.9316039809879,66.1113795776753,54.9829928187175,7.91643120448119,9.57425556583833,8.52449501065388,44.9824319874305,52.1994406715849,37.3693349397345,34.6723158054306,38.5897359630949,44.9580908539591,42.9833646869692,90.5962984529409,64.2418646504995,3.16882929467913,4.03948169933583,3.35453832813401,2.47122988522289,1.65194582125657,1.12507910687956,1.71007646244749,1.79025009479181,1.27864907635244,0,0,0,0.426730222566507,0,0,0,0,1.1384259382189,4.11066032559657,1.14681968437569,2.64342657158052,12.8916969485753,0.263384084775077,2.16380747125216,2.35806457649499,2.46721798799411,0.167186495390678,0.32592226663359,0,0,0.334231370655521,1.47302953737419,0.886135578334485,1.35401931882508,0.512365278902701,0.910415432919148,0.328875809207352,0,0,0.14828656316206,0,1.04535523804977,0.226618685395132,0,0,0.506039384039006,0,0,0,0.150575119077773,0,0,0,0,2.21767417547206,2.13952156626806,1.88271725047639,0,0,0,0.361439152384566,0,0.434539556882471,1.5905718941022,0.973269740605272,0.283604451492204,0.443458794925128,0.351339142772504,0.392937226493138,0,0.741568885568859,0.97364218096405,1.39303789839414,0.7977477631131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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=5597 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6879 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=29bp_to_ENST00000558100_5end | |||
|coexpression_cluster_id=C17 | |||
|description=CAGE_peak_4_at_MAPK6_5end | |||
|id=chr15:52311464..52311484,+ | |||
|ontology_enrichment_celltype=CL:0002057!7.15e-26!42;CL:0000766!2.91e-25!76;CL:0000557!1.54e-24!71;CL:0000860!6.61e-24!45;CL:0000839!7.99e-22!70;CL:0002009!3.69e-21!65;CL:0002194!5.44e-20!63;CL:0000576!5.44e-20!63;CL:0000040!5.44e-20!63;CL:0000559!5.44e-20!63;CL:0000763!2.99e-19!112;CL:0000049!2.99e-19!112;CL:0000738!1.95e-18!140;CL:0002031!1.29e-16!124;CL:0000037!2.86e-16!172;CL:0000566!2.86e-16!172;CL:0002032!1.50e-15!165;CL:0000837!1.50e-15!165;CL:0002087!1.36e-14!119;CL:0000988!1.65e-14!182;CL:0000063!5.28e-14!578;CL:0000012!8.48e-12!682;CL:0000134!1.35e-11!358;CL:0000548!4.39e-11!679;CL:0000004!4.39e-11!679;CL:0000255!4.39e-11!679;CL:0002320!2.00e-10!365;CL:0000144!2.62e-09!625;CL:0000219!4.61e-09!390;CL:0000034!4.92e-09!444;CL:0000723!1.42e-08!436;CL:0002371!6.02e-08!591;CL:0000048!6.22e-08!430;CL:0000003!4.42e-07!722 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.47e-30;33!CL:0002057;2.47e-30;33!CL:0000576;4.10e-23;48!CL:0000473;1.19e-22;39!CL:0000234;1.19e-22;39!CL:0000766;6.02e-19;69!CL:0002087;3.27e-10;104!CL:0000763;2.65e-08;100!CL:0000738;7.42e-08;136!CL:0002393;5.95e-07;6!CL:0002397;5.95e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,5.55e-40,72;CL:0000860,7.28e-40,42;CL:0002057,7.28e-40,42;CL:0000557,3.89e-39,67;CL:0000473,2.91e-36,48;CL:0000234,2.91e-36,48;CL:0000738,1.37e-34,136;CL:0000839,1.54e-34,66;CL:0002009,1.05e-33,61;CL:0002194,8.10e-32,59;CL:0000576,8.10e-32,59;CL:0000040,8.10e-32,59;CL:0000559,8.10e-32,59;CL:0002031,2.29e-31,120;CL:0002087,2.02e-28,115;CL:0000037,5.32e-26,168;CL:0000763,9.37e-26,108;CL:0000049,9.37e-26,108;CL:0002032,1.20e-25,161;CL:0000837,1.20e-25,161;CL:0000988,1.32e-24,177;CL:0000134,2.62e-15,354;CL:0002320,3.00e-14,361;CL:0000034,2.27e-12,441;CL:0000723,2.40e-12,433;CL:0000048,3.29e-11,427;CL:0000219,1.18e-10,386;CL:0002393,4.42e-08,9;CL:0002397,4.42e-08,9 | |||
|ontology_enrichment_development_v019=CL:0002057;7.73e-29;42!CL:0000049;1.42e-07;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!2.17e-22!80;UBERON:0001474!1.23e-21!86;UBERON:0004765!2.94e-18!101;UBERON:0001434!2.94e-18!101;UBERON:0002390!3.02e-16!102;UBERON:0003061!3.02e-16!102;UBERON:0002405!1.06e-15!115;UBERON:0002193!2.49e-13!112;UBERON:0002384!3.51e-10!375;UBERON:0002204!2.51e-07!167 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.38e-35,76;UBERON:0001474,3.24e-32,82;UBERON:0004765,6.59e-31,90;UBERON:0002390,3.50e-28,98;UBERON:0003061,3.50e-28,98;UBERON:0002405,6.98e-27,93;UBERON:0001434,2.14e-25,100;UBERON:0002193,4.48e-24,108;UBERON:0002384,7.85e-13,371;UBERON:0002204,2.29e-11,167;UBERON:0003081,7.62e-09,203 | |||
|phase1_expression=1.09007027562334,1.2846031433459,1.40954404095971,2.00146596706261,0.446961094427288,0,2.53299878168311,1.26343974685366,0,0,0,0.218441372130172,0,0.247532705920093,0.331397375727916,0,0,1.46062018077475,0.487932798790507,0.123121058076788,0,0.626909442956176,0.572471974262113,0.273748850145768,0.502170558379211,2.8272960126742,2.21671591514854,2.44003422072406,7.08055698328027,13.0501995353052,11.3015770020735,2.75826367343678,1.204823675113,2.58827807116751,0.0774672005803016,0.568676929949686,0.587200878669695,37.6716877801677,31.6860227002824,26.9093479687656,0,0.32389366601898,0,4.50734540216651,4.91238726795452,7.03493777444667,26.2644811703424,38.2386135860298,35.6162326529369,42.003089279034,39.4487488054815,58.4111107824805,89.2891313107842,76.1671926628915,83.9644216884919,13.1769637679823,16.6472751535286,22.0229014756183,56.9316039809879,66.1113795776753,54.9829928187175,7.91643120448119,9.57425556583833,8.52449501065388,44.9824319874305,52.1994406715849,37.3693349397345,34.6723158054306,38.5897359630949,44.9580908539591,42.9833646869692,90.5962984529409,64.2418646504995,3.16882929467913,4.03948169933583,3.35453832813401,2.47122988522289,1.65194582125657,1.12507910687956,1.71007646244749,1.79025009479181,1.27864907635244,0,0,0,0.426730222566507,0,0,0,0,1.1384259382189,4.11066032559657,1.14681968437569,2.64342657158052,12.8916969485753,0.263384084775077,2.16380747125216,2.35806457649499,2.46721798799411,0.167186495390678,0.32592226663359,0,0,0.334231370655521,1.47302953737419,0.886135578334485,1.35401931882508,0.512365278902701,0.910415432919148,0.328875809207352,0,0,0.14828656316206,0,1.04535523804977,0.226618685395132,0,0,0.506039384039006,0,0,0,0.150575119077773,0,0,0,0,2.21767417547206,2.13952156626806,1.88271725047639,0,0,0,0.361439152384566,0,0.434539556882471,1.5905718941022,0.973269740605272,0.283604451492204,0.443458794925128,0.351339142772504,0.392937226493138,0,0.741568885568859,0.97364218096405,1.39303789839414,0.797747763113191,1.43094374583205,0,0.74291500265913,0.39752481473341,0,0.694281003215189,1.13061588384802,0,0,0,0.258416759169329,1.06729878806013,0.33472061276467,0.402829317109147,0,0,0,0.81014194788176,0.357198913136319,0.44905874525234,0,1.53316637465883,0.949265659568129,0.183201743930407,7.9068250461638,54.2892369807656,0.436094052142534,0.496971951695318,0.506522046658319,1.05927344650575,0.286836620748814,0.354668382198357,0.560677600142307,0,0.98667019366864,0.622422070799533,0.538842688278752,0.326923806226917,0,0,0,0,0.570471821544449,0.448346041655403,0.587172493218824,0.161872944368132,0.140450806702248,0.408308342509787,0,0.206651562351531,0,0,0,0,0,0.125118519871964,0,0.438977620880838,0.612975591598039,0.901428353439581,0.567160915800105,1.4351170855109,0.427114777637135,0.211931901159562,1.50045548042201,0.412210116953756,1.03056216018252,0.37223371266318,2.36286865137773,0.779496041289589,1.00973509697646,0.460249493211497,0.323292113637624,1.77504796258307,0.705264687593482,0.169560592310488,2.12586938479627,3.54569956768085,2.58124135850103,0.487894824518382,0.662648841607426,0.464775771478074,0.829288440122964,0,0.36497735907583,0,0,1.38134921352481,0.464367928031979,0,0.354920400119532,0.337169380156203,0,0.330881918197182,0.435758888184812,0.71181185733329,0.808987848960987,0.196221465125346,0.38474715694639,0,0,0,0,5.07020139287323,0,0,0.441463099414651,0,0.343135620597051,2.74375713521564,4.49607013030478,1.40740561376283,6.66636805141413,0,0,0,0.231860809950154,0.352226082707465,0,0,0.190254152234598,0,0.858486162094873,0,0.936017060556951,0,7.49870671894216,1.6798212819886,1.84307626415102,4.29880908973672,1.45316969256981,0.383382679165211,436.992292013702,3.16974362447614,23.4280770561072,2.73827911492227,18.6838801471042,0,0,0,0,0.102827492703324,0,0.285826432630578,0,0,0.22001485746285,1.29271715757778,0,0,2.39344304926383,3.12022310734098,0.257207374262142,0,0,0.57191197463259,0,0,0,0.355391948742546,0,2.1100756394171,4.35766729300147,1.3996218765488,4.86495122564762,2.00902836572851,0,1.19812427745791,0,0,1.15825045334063,1.84928690295345,3.04403637507822,0,2.56139988262505,3.01878604803324,3.33691894327346,0.76228387266739,1.30139853857622,0.773288812777695,0,0,0.749007023947182,0,2.48649308061621,0.36807447515742,0,0,0.415941723061614,0.535286966391485,0.788512075169673,0.585707074963566,0.601892199455438,0,0,0.664225598535437,0.184369168541703,0.868836144680828,0,0,1.6541442089831,4.74571241800957,4.26910231213777,0.909382714338778,0,0,1.48864684691266,0.61384789315225,1.68396056659844,1.02511319404561,0,0.64341568457443,1.48418066444991,0.308419387605311,0.355123450626254,0.739144404124282,0,0.232420756919918,1.0877350463246,3.80962293576241,3.40699659062816,1.49258782613989,0.728364672026868,0.524497659837696,0,0.15403067420883,0,0,0.211103257785751,0,0.170093705276516,0.431831832204279,1.54227252690289,0,0,0,0.831076008928724,0,0.219259876645935,0.261435451024901,0,0.328014645699706,0.976135183992909,0.103041011647722,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| |||
|short_description=p4@MAPK6 | |||
}} |
Revision as of 07:25, 11 September 2013
Short description: | p4@MAPK6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_MAPK6_5end |
Coexpression cluster: | C17_Mast_CD14_Monocytederived_Lymphatic_Smooth_mesenchymal_Macrophage |
Association with transcript: | 29bp_to_ENST00000558100_5end |
EntrezGene: | MAPK6 |
HGNC: | 6879 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 5.55e-40 | 72 |
classical monocyte | 7.28e-40 | 42 |
CD14-positive, CD16-negative classical monocyte | 7.28e-40 | 42 |
granulocyte monocyte progenitor cell | 3.89e-39 | 67 |
defensive cell | 2.91e-36 | 48 |
phagocyte | 2.91e-36 | 48 |
leukocyte | 1.37e-34 | 136 |
myeloid lineage restricted progenitor cell | 1.54e-34 | 66 |
macrophage dendritic cell progenitor | 1.05e-33 | 61 |
monopoietic cell | 8.10e-32 | 59 |
monocyte | 8.10e-32 | 59 |
monoblast | 8.10e-32 | 59 |
promonocyte | 8.10e-32 | 59 |
hematopoietic lineage restricted progenitor cell | 2.29e-31 | 120 |
nongranular leukocyte | 2.02e-28 | 115 |
hematopoietic stem cell | 5.32e-26 | 168 |
myeloid cell | 9.37e-26 | 108 |
common myeloid progenitor | 9.37e-26 | 108 |
hematopoietic oligopotent progenitor cell | 1.20e-25 | 161 |
hematopoietic multipotent progenitor cell | 1.20e-25 | 161 |
hematopoietic cell | 1.32e-24 | 177 |
mesenchymal cell | 2.62e-15 | 354 |
connective tissue cell | 3.00e-14 | 361 |
stem cell | 2.27e-12 | 441 |
somatic stem cell | 2.40e-12 | 433 |
multi fate stem cell | 3.29e-11 | 427 |
motile cell | 1.18e-10 | 386 |
intermediate monocyte | 4.42e-08 | 9 |
CD14-positive, CD16-positive monocyte | 4.42e-08 | 9 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.38e-35 | 76 |
bone element | 3.24e-32 | 82 |
skeletal element | 6.59e-31 | 90 |
hematopoietic system | 3.50e-28 | 98 |
blood island | 3.50e-28 | 98 |
immune system | 6.98e-27 | 93 |
skeletal system | 2.14e-25 | 100 |
hemolymphoid system | 4.48e-24 | 108 |
connective tissue | 7.85e-13 | 371 |
musculoskeletal system | 2.29e-11 | 167 |
lateral plate mesoderm | 7.62e-09 | 203 |
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