FFCP PHASE1:Hg19::chr15:72514906..72514917,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr15:72514906..72514917,-|id=chr15:72514906..72514917,-|ontology_enrichment_celltype=CL:0002076!8.24e-12!43;CL:0002057!6.13e-09!42;CL:0002368!2.41e-08!13;CL:0000223!4.77e-08!59;CL:0000860!8.07e-08!45;CL:0002159!3.94e-07!13|ontology_enrichment_celltype_v019=CL:0000244;7.62e-14;4!CL:0000731;7.62e-14;4!CL:0002623;4.75e-10;3!CL:0000622;4.96e-10;5!CL:0000860;1.06e-09;33!CL:0002057;1.06e-09;33!CL:0002159;1.13e-09;14!CL:0002076;1.40e-09;42!CL:0002328;1.66e-09;3!CL:0002251;1.50e-08;20!CL:0000154;2.33e-08;6!CL:0002202;4.35e-08;9!CL:0002632;4.35e-08;9!CL:0002368;1.27e-07;13!CL:0002602;2.31e-07;2!CL:0000473;4.31e-07;39!CL:0000234;4.31e-07;39!CL:0000575;5.32e-07;2|ontology_enrichment_celltype_v019_2=CL:0000244,8.47e-14,4;CL:0000731,8.47e-14,4;CL:0002076,1.84e-12,42;CL:0002159,6.20e-10,14;CL:0000622,7.04e-10,5;CL:0002623,1.05e-09,3;CL:0002328,1.12e-09,3;CL:0002251,2.07e-08,20;CL:0000154,3.11e-08,6;CL:0002202,3.70e-08,9;CL:0002632,3.70e-08,9;CL:0000223,4.51e-08,58;CL:0000860,7.46e-08,42;CL:0002057,7.46e-08,42;CL:0002368,9.57e-08,13;CL:0002602,1.93e-07,2;CL:0000575,2.72e-07,2|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001004!4.18e-08!72;UBERON:0000166!6.34e-08!21;UBERON:0000165!9.83e-08!28;UBERON:0000930!9.83e-08!28|ontology_enrichment_uberon_v019=UBERON:0000365;4.58e-11;5!UBERON:0000165;8.07e-11;28!UBERON:0004815;1.66e-09;3!UBERON:0002031;1.66e-09;3!UBERON:0005910;3.29e-09;6!UBERON:0000486;5.32e-09;12!UBERON:0000161;1.16e-08;19!UBERON:0000166;1.16e-08;19!UBERON:0001905;1.14e-07;2!UBERON:0002757;1.14e-07;2!UBERON:0010134;1.14e-07;2!UBERON:0005408;1.14e-07;2!UBERON:0001899;1.14e-07;2!UBERON:0006444;2.31e-07;2!UBERON:0001995;2.31e-07;2!UBERON:0004715;2.31e-07;2|ontology_enrichment_uberon_v019_2=UBERON:0000166,2.13e-11,22;UBERON:0000365,4.98e-11,5;UBERON:0000165,4.07e-10,29;UBERON:0000930,4.07e-10,29;UBERON:0004815,1.12e-09,3;UBERON:0002031,1.12e-09,3;UBERON:0005910,3.52e-09,6;UBERON:0001905,1.16e-07,2;UBERON:0002757,1.16e-07,2;UBERON:0010134,1.16e-07,2;UBERON:0005408,1.16e-07,2;UBERON:0001899,1.16e-07,2;UBERON:0000161,1.42e-07,36;UBERON:0006444,1.93e-07,2;UBERON:0001995,1.93e-07,2;UBERON:0004715,1.93e-07,2;UBERON:0001444,2.08e-07,49;UBERON:0001004,2.31e-07,74;UBERON:0000153,2.63e-07,62;UBERON:0007811,2.63e-07,62;UBERON:0000033,2.65e-07,56;UBERON:0003102,3.27e-07,99|phase1_expression=0,0.428201047781966,0,0,0,0,0,0,0,0.245733936501509,0,0,0,2.97039247104112,2.31978163009541,0,0,0,0,0,0.612002073732759,0.626909442956176,0,0,0,0,0,0,0,0,0,1.83884244895785,2.10844143144775,1.47901604066715,0,0,0,0,0,0,0,0,0,0.581592955118259,0.377875943688809,0.727752183563449,0.929716147622738,0,0.929119112685311,3.16461631554365,2.0492856522328,1.6553756092201,0,0.645484683583826,0,0.376484679085209,0,0.449446968890169,0.918251677112708,0.320929027076094,0,1.64925650093358,2.79249120670285,2.13112375266347,1.16083695451434,2.26954089876456,1.24564449799115,2.76373531782418,2.60741459210101,1.73751075764093,0,0.368277635987565,0.316462387440884,0,0,0.209658645508376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0,0,0,0,0,0,1.50401373190767,0.869079113764942,0,0.486634870302636,0,0,0,0,2.91436230634034,1.85392221392215,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.05265836499774,0,0.12663051166458,0.132409180813219,0,0,0,0,0.24666754841716,0,0.134710672069688,0,0,0,0,0,0,0.149448680551801,0.117434498643765,0,0,0.204154171254893,0,1.13658359293342,0,0.247266929278557,0,0,0,0,0,0.438977620880838,0.612975591598039,0,0.113432183160021,0,0,0,0,0,0.257640540045629,0.18611685633159,0,0,0.252433774244115,0.0920498986422993,0.161646056818812,0,0.10075209822764,0.169560592310488,1.35282597214308,1.36373060295417,0.286804595389004,0,0,0,0,0,0,0,0,0,0.464367928031979,1.44375896333917,0,0,0.241011029883482,0.110293972732394,0,0,0,0.196221465125346,0,0,0,0,0,0,0,0,0,0,0,1.31700342490351,5.62008766288098,0.703702806881416,3.51836091602412,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,2.85569617938061,0.708875486211932,0.985143749731331,0.290633938513962,1.15014803749563,0.492663237895943,0.176096868026452,0,0,0,0.063497894292169,0,0,0,0.102827492703324,0,0,0,0,0,0,3.57656445851882,0,0,0,0,0,0.799266537048298,0,2.17048642156577,0,0,0,0.791951872933429,0.602878754119172,0,0.099972991182057,0,0,0,0.479249710983165,1.14861935834114,0,0.434343920002738,0,0.358121926479791,0,0,0,0,0,0,0,0,0,0,0,0,0.613457458595699,1.00034104211935,0,0,0.178428988797162,0.315404830067869,0.117141414992713,0,0,0,0,0.184369168541703,0,0.195801157462741,0,0,0,0,0,0,0,0,0,0,0.128139149255701,0,0,0,0,0,0.0821271560138091,0,0,0,1.40354529212299,0.736647911487171,0,0.1820911680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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr15:72514906..72514917,- | |||
|id=chr15:72514906..72514917,- | |||
|ontology_enrichment_celltype=CL:0002076!8.24e-12!43;CL:0002057!6.13e-09!42;CL:0002368!2.41e-08!13;CL:0000223!4.77e-08!59;CL:0000860!8.07e-08!45;CL:0002159!3.94e-07!13 | |||
|ontology_enrichment_celltype_v019=CL:0000244;7.62e-14;4!CL:0000731;7.62e-14;4!CL:0002623;4.75e-10;3!CL:0000622;4.96e-10;5!CL:0000860;1.06e-09;33!CL:0002057;1.06e-09;33!CL:0002159;1.13e-09;14!CL:0002076;1.40e-09;42!CL:0002328;1.66e-09;3!CL:0002251;1.50e-08;20!CL:0000154;2.33e-08;6!CL:0002202;4.35e-08;9!CL:0002632;4.35e-08;9!CL:0002368;1.27e-07;13!CL:0002602;2.31e-07;2!CL:0000473;4.31e-07;39!CL:0000234;4.31e-07;39!CL:0000575;5.32e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000244,8.47e-14,4;CL:0000731,8.47e-14,4;CL:0002076,1.84e-12,42;CL:0002159,6.20e-10,14;CL:0000622,7.04e-10,5;CL:0002623,1.05e-09,3;CL:0002328,1.12e-09,3;CL:0002251,2.07e-08,20;CL:0000154,3.11e-08,6;CL:0002202,3.70e-08,9;CL:0002632,3.70e-08,9;CL:0000223,4.51e-08,58;CL:0000860,7.46e-08,42;CL:0002057,7.46e-08,42;CL:0002368,9.57e-08,13;CL:0002602,1.93e-07,2;CL:0000575,2.72e-07,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001004!4.18e-08!72;UBERON:0000166!6.34e-08!21;UBERON:0000165!9.83e-08!28;UBERON:0000930!9.83e-08!28 | |||
|ontology_enrichment_uberon_v019=UBERON:0000365;4.58e-11;5!UBERON:0000165;8.07e-11;28!UBERON:0004815;1.66e-09;3!UBERON:0002031;1.66e-09;3!UBERON:0005910;3.29e-09;6!UBERON:0000486;5.32e-09;12!UBERON:0000161;1.16e-08;19!UBERON:0000166;1.16e-08;19!UBERON:0001905;1.14e-07;2!UBERON:0002757;1.14e-07;2!UBERON:0010134;1.14e-07;2!UBERON:0005408;1.14e-07;2!UBERON:0001899;1.14e-07;2!UBERON:0006444;2.31e-07;2!UBERON:0001995;2.31e-07;2!UBERON:0004715;2.31e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000166,2.13e-11,22;UBERON:0000365,4.98e-11,5;UBERON:0000165,4.07e-10,29;UBERON:0000930,4.07e-10,29;UBERON:0004815,1.12e-09,3;UBERON:0002031,1.12e-09,3;UBERON:0005910,3.52e-09,6;UBERON:0001905,1.16e-07,2;UBERON:0002757,1.16e-07,2;UBERON:0010134,1.16e-07,2;UBERON:0005408,1.16e-07,2;UBERON:0001899,1.16e-07,2;UBERON:0000161,1.42e-07,36;UBERON:0006444,1.93e-07,2;UBERON:0001995,1.93e-07,2;UBERON:0004715,1.93e-07,2;UBERON:0001444,2.08e-07,49;UBERON:0001004,2.31e-07,74;UBERON:0000153,2.63e-07,62;UBERON:0007811,2.63e-07,62;UBERON:0000033,2.65e-07,56;UBERON:0003102,3.27e-07,99 | |||
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| |||
|short_description=p@chr15:72514906..72514917,- | |||
}} |
Revision as of 08:08, 11 September 2013
Short description: | p@chr15:72514906..72514917, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr15:72514906..72514917, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
transitional epithelial cell | 8.47e-14 | 4 |
urothelial cell | 8.47e-14 | 4 |
endo-epithelial cell | 1.84e-12 | 42 |
general ecto-epithelial cell | 6.20e-10 | 14 |
acinar cell | 7.04e-10 | 5 |
acinar cell of salivary gland | 1.05e-09 | 3 |
bronchial epithelial cell | 1.12e-09 | 3 |
epithelial cell of alimentary canal | 2.07e-08 | 20 |
protein secreting cell | 3.11e-08 | 6 |
epithelial cell of tracheobronchial tree | 3.70e-08 | 9 |
epithelial cell of lower respiratory tract | 3.70e-08 | 9 |
endodermal cell | 4.51e-08 | 58 |
classical monocyte | 7.46e-08 | 42 |
CD14-positive, CD16-negative classical monocyte | 7.46e-08 | 42 |
respiratory epithelial cell | 9.57e-08 | 13 |
annulus pulposus cell | 1.93e-07 | 2 |
corneal epithelial cell | 2.72e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
oral opening | 2.13e-11 | 22 |
urothelium | 4.98e-11 | 5 |
mouth | 4.07e-10 | 29 |
stomodeum | 4.07e-10 | 29 |
lower respiratory tract epithelium | 1.12e-09 | 3 |
epithelium of bronchus | 1.12e-09 | 3 |
transitional epithelium | 3.52e-09 | 6 |
pineal body | 1.16e-07 | 2 |
regional part of epithalamus | 1.16e-07 | 2 |
secretory circumventricular organ | 1.16e-07 | 2 |
circumventricular organ | 1.16e-07 | 2 |
epithalamus | 1.16e-07 | 2 |
orifice | 1.42e-07 | 36 |
annulus fibrosus | 1.93e-07 | 2 |
fibrocartilage | 1.93e-07 | 2 |
annulus fibrosus disci intervertebralis | 1.93e-07 | 2 |
subdivision of head | 2.08e-07 | 49 |
respiratory system | 2.31e-07 | 74 |
anterior region of body | 2.63e-07 | 62 |
craniocervical region | 2.63e-07 | 62 |
head | 2.65e-07 | 56 |
surface structure | 3.27e-07 | 99 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.