FFCP PHASE1:Hg19::chr17:7017634..7017649,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=433|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=743|TSSclassifier=S|UniProt=P07307,Q7Z4G9|association_with_transcript=-5bp_to_ENST00000446679,NM_080914,uc002gen.1,uc002geo.1_5end|coexpression_cluster_id=C5|description=CAGE_peak_7_at_ASGR2_5end|id=chr17:7017634..7017649,-|ontology_enrichment_celltype=CL:0000181!1.63e-31!12;CL:0000417!1.63e-31!12;CL:0000668!1.63e-31!12;CL:0000414!1.63e-31!12;CL:0000412!1.63e-31!12;CL:0000182!1.63e-31!12;CL:0002057!2.47e-16!42;CL:0000860!3.86e-15!45;CL:0000223!1.26e-11!59;CL:0002194!3.54e-10!63;CL:0000576!3.54e-10!63;CL:0000040!3.54e-10!63;CL:0000559!3.54e-10!63;CL:0002009!8.04e-10!65;CL:0000839!5.11e-09!70;CL:0000557!7.16e-09!71;CL:0002563!1.64e-08!4;CL:0000766!3.41e-08!76|ontology_enrichment_celltype_v019=CL:0000182;2.22e-66;12|ontology_enrichment_celltype_v019_2=CL:0000182,2.34e-66,12;CL:0000223,1.39e-17,58|ontology_enrichment_development_v019=UBERON:0004161;2.16e-53;11!UBERON:0009497;3.40e-45;13!UBERON:0001041;1.40e-19;30!UBERON:0003104;5.27e-19;31!CL:0000223;1.85e-12;58|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=DOID:7,5.21e-07,39|ontology_enrichment_uberon=UBERON:0002107!1.82e-32!19;UBERON:0006925!1.82e-32!19;UBERON:0008836!1.82e-32!19;UBERON:0009497!7.02e-30!25;UBERON:0000015!7.02e-30!25;UBERON:0002423!7.02e-30!25;UBERON:0006235!7.02e-30!25;UBERON:0004161!7.02e-30!25;UBERON:0005057!1.24e-28!26;UBERON:0008835!7.34e-28!22;UBERON:0003894!7.34e-28!22;UBERON:0009854!1.36e-26!23;UBERON:0007499!2.33e-24!25;UBERON:0009856!2.27e-23!26;UBERON:0002405!5.43e-23!115;UBERON:0003929!4.20e-22!54;UBERON:0002365!2.20e-19!31;UBERON:0002330!2.20e-19!31;UBERON:0002368!5.17e-17!35;UBERON:0005172!2.47e-15!55;UBERON:0005173!2.47e-15!55;UBERON:0005911!9.39e-14!82;UBERON:0002417!1.22e-13!61;UBERON:0000916!1.22e-13!61;UBERON:0000949!6.30e-13!45;UBERON:0002530!8.61e-12!59;UBERON:0001242!1.64e-08!4;UBERON:0001262!1.64e-08!4;UBERON:0004786!1.64e-08!4;UBERON:0004808!1.64e-08!4;UBERON:0001277!1.64e-08!4;UBERON:0004921!8.43e-08!129;UBERON:0004185!8.43e-08!129;UBERON:0000077!9.02e-08!130;UBERON:0002371!1.03e-07!80;UBERON:0000490!3.19e-07!138;UBERON:0001007!3.29e-07!155;UBERON:0001555!3.29e-07!155;UBERON:0007026!3.29e-07!155;UBERON:0001474!4.51e-07!86;UBERON:0002390!5.49e-07!102;UBERON:0003061!5.49e-07!102;UBERON:0003350!5.64e-07!5;UBERON:0005177!5.68e-07!107|ontology_enrichment_uberon_v019=UBERON:0002107;2.64e-69;19!UBERON:0006925;2.64e-69;19!UBERON:0002423;1.38e-52;25!UBERON:0002365;5.14e-41;31!UBERON:0002330;5.14e-41;31!UBERON:0002368;5.83e-36;33!UBERON:0000949;1.01e-25;43!UBERON:0002530;3.15e-16;57!UBERON:0005172;1.08e-15;52!UBERON:0005173;1.08e-15;52!UBERON:0002417;1.60e-14;58!UBERON:0000916;1.60e-14;58!UBERON:0001007;1.48e-08;81|ontology_enrichment_uberon_v019_2=UBERON:0002107,2.64e-69,19;UBERON:0006925,2.64e-69,19;UBERON:0008836,2.64e-69,19;UBERON:0008835,8.28e-60,22;UBERON:0003894,8.28e-60,22;UBERON:0009854,3.42e-57,23;UBERON:0007499,1.38e-52,25;UBERON:0009497,1.38e-52,25;UBERON:0000015,1.38e-52,25;UBERON:0002423,1.38e-52,25;UBERON:0006235,1.38e-52,25;UBERON:0004161,1.38e-52,25;UBERON:0009856,1.50e-50,26;UBERON:0002365,2.49e-42,31;UBERON:0002330,2.49e-42,31;UBERON:0002368,1.92e-37,35;UBERON:0003929,1.04e-29,54;UBERON:0000949,5.16e-29,45;UBERON:0002530,3.87e-27,59;UBERON:0005172,4.34e-24,54;UBERON:0005173,4.34e-24,54;UBERON:0002417,1.27e-21,60;UBERON:0000916,1.27e-21,60;UBERON:0005911,2.44e-19,82;UBERON:0001041,1.02e-14,87;UBERON:0004921,4.34e-13,118;UBERON:0005256,9.54e-13,122;UBERON:0005177,1.39e-12,101;UBERON:0009569,2.82e-11,112;UBERON:0003914,9.20e-11,117;UBERON:0001007,1.63e-10,145;UBERON:0001555,1.63e-10,145;UBERON:0007026,1.63e-10,145;UBERON:0000490,2.33e-10,148;UBERON:0003104,1.62e-09,160;UBERON:0009142,1.62e-09,160;UBERON:0004119,1.88e-09,160;UBERON:0000925,1.88e-09,160;UBERON:0006595,1.88e-09,160;UBERON:0001048,1.17e-07,160;UBERON:0002100,1.81e-07,199|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290796477559129,0,0,0,0.411167888021826,0,0,0,0,0.344745680736619,0,0,0,0,0.224723484445085,0.306083892370903,0.641858054152187,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0.368277635987565,0,0,0,0,0.112328631146495,0.600707571366025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,29.1536580090211,6.87979051674338,8.86184860022106,0,0.860919069801795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=433 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=743 | |||
|TSSclassifier=S | |||
|UniProt=P07307,Q7Z4G9 | |||
|association_with_transcript=-5bp_to_ENST00000446679,NM_080914,uc002gen.1,uc002geo.1_5end | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_7_at_ASGR2_5end | |||
|id=chr17:7017634..7017649,- | |||
|ontology_enrichment_celltype=CL:0000181!1.63e-31!12;CL:0000417!1.63e-31!12;CL:0000668!1.63e-31!12;CL:0000414!1.63e-31!12;CL:0000412!1.63e-31!12;CL:0000182!1.63e-31!12;CL:0002057!2.47e-16!42;CL:0000860!3.86e-15!45;CL:0000223!1.26e-11!59;CL:0002194!3.54e-10!63;CL:0000576!3.54e-10!63;CL:0000040!3.54e-10!63;CL:0000559!3.54e-10!63;CL:0002009!8.04e-10!65;CL:0000839!5.11e-09!70;CL:0000557!7.16e-09!71;CL:0002563!1.64e-08!4;CL:0000766!3.41e-08!76 | |||
|ontology_enrichment_celltype_v019=CL:0000182;2.22e-66;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,2.34e-66,12;CL:0000223,1.39e-17,58 | |||
|ontology_enrichment_development_v019=UBERON:0004161;2.16e-53;11!UBERON:0009497;3.40e-45;13!UBERON:0001041;1.40e-19;30!UBERON:0003104;5.27e-19;31!CL:0000223;1.85e-12;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:7,5.21e-07,39 | |||
|ontology_enrichment_uberon=UBERON:0002107!1.82e-32!19;UBERON:0006925!1.82e-32!19;UBERON:0008836!1.82e-32!19;UBERON:0009497!7.02e-30!25;UBERON:0000015!7.02e-30!25;UBERON:0002423!7.02e-30!25;UBERON:0006235!7.02e-30!25;UBERON:0004161!7.02e-30!25;UBERON:0005057!1.24e-28!26;UBERON:0008835!7.34e-28!22;UBERON:0003894!7.34e-28!22;UBERON:0009854!1.36e-26!23;UBERON:0007499!2.33e-24!25;UBERON:0009856!2.27e-23!26;UBERON:0002405!5.43e-23!115;UBERON:0003929!4.20e-22!54;UBERON:0002365!2.20e-19!31;UBERON:0002330!2.20e-19!31;UBERON:0002368!5.17e-17!35;UBERON:0005172!2.47e-15!55;UBERON:0005173!2.47e-15!55;UBERON:0005911!9.39e-14!82;UBERON:0002417!1.22e-13!61;UBERON:0000916!1.22e-13!61;UBERON:0000949!6.30e-13!45;UBERON:0002530!8.61e-12!59;UBERON:0001242!1.64e-08!4;UBERON:0001262!1.64e-08!4;UBERON:0004786!1.64e-08!4;UBERON:0004808!1.64e-08!4;UBERON:0001277!1.64e-08!4;UBERON:0004921!8.43e-08!129;UBERON:0004185!8.43e-08!129;UBERON:0000077!9.02e-08!130;UBERON:0002371!1.03e-07!80;UBERON:0000490!3.19e-07!138;UBERON:0001007!3.29e-07!155;UBERON:0001555!3.29e-07!155;UBERON:0007026!3.29e-07!155;UBERON:0001474!4.51e-07!86;UBERON:0002390!5.49e-07!102;UBERON:0003061!5.49e-07!102;UBERON:0003350!5.64e-07!5;UBERON:0005177!5.68e-07!107 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;2.64e-69;19!UBERON:0006925;2.64e-69;19!UBERON:0002423;1.38e-52;25!UBERON:0002365;5.14e-41;31!UBERON:0002330;5.14e-41;31!UBERON:0002368;5.83e-36;33!UBERON:0000949;1.01e-25;43!UBERON:0002530;3.15e-16;57!UBERON:0005172;1.08e-15;52!UBERON:0005173;1.08e-15;52!UBERON:0002417;1.60e-14;58!UBERON:0000916;1.60e-14;58!UBERON:0001007;1.48e-08;81 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,2.64e-69,19;UBERON:0006925,2.64e-69,19;UBERON:0008836,2.64e-69,19;UBERON:0008835,8.28e-60,22;UBERON:0003894,8.28e-60,22;UBERON:0009854,3.42e-57,23;UBERON:0007499,1.38e-52,25;UBERON:0009497,1.38e-52,25;UBERON:0000015,1.38e-52,25;UBERON:0002423,1.38e-52,25;UBERON:0006235,1.38e-52,25;UBERON:0004161,1.38e-52,25;UBERON:0009856,1.50e-50,26;UBERON:0002365,2.49e-42,31;UBERON:0002330,2.49e-42,31;UBERON:0002368,1.92e-37,35;UBERON:0003929,1.04e-29,54;UBERON:0000949,5.16e-29,45;UBERON:0002530,3.87e-27,59;UBERON:0005172,4.34e-24,54;UBERON:0005173,4.34e-24,54;UBERON:0002417,1.27e-21,60;UBERON:0000916,1.27e-21,60;UBERON:0005911,2.44e-19,82;UBERON:0001041,1.02e-14,87;UBERON:0004921,4.34e-13,118;UBERON:0005256,9.54e-13,122;UBERON:0005177,1.39e-12,101;UBERON:0009569,2.82e-11,112;UBERON:0003914,9.20e-11,117;UBERON:0001007,1.63e-10,145;UBERON:0001555,1.63e-10,145;UBERON:0007026,1.63e-10,145;UBERON:0000490,2.33e-10,148;UBERON:0003104,1.62e-09,160;UBERON:0009142,1.62e-09,160;UBERON:0004119,1.88e-09,160;UBERON:0000925,1.88e-09,160;UBERON:0006595,1.88e-09,160;UBERON:0001048,1.17e-07,160;UBERON:0002100,1.81e-07,199 | |||
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|short_description=p7@ASGR2 | |||
}} |
Revision as of 15:22, 11 September 2013
Short description: | p7@ASGR2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_ASGR2_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | -5bp_to_ENST00000446679, NM_080914, uc002gen.1, uc002geo.1_5end |
EntrezGene: | ASGR2 |
HGNC: | 743 |
UniProt: | P07307Q7Z4G9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 2.34e-66 | 12 |
endodermal cell | 1.39e-17 | 58 |
Ontology term | p-value | n |
---|---|---|
disease of anatomical entity | 5.21e-07 | 39 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.