FFCP PHASE1:Hg19::chr17:72270457..72270470,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=64446|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=18744|TSSclassifier=S|UniProt=|association_with_transcript=60bp_to_uc002jkf.2,uc002jkg.2,uc010dfp.2_5end|coexpression_cluster_id=C168|description=CAGE_peak_3_at_DNAI2_5end|id=chr17:72270457..72270470,+|ontology_enrichment_celltype=CL:0002057!2.69e-46!42;CL:0000860!1.07e-42!45;CL:0000766!5.43e-40!76;CL:0000557!4.55e-38!71;CL:0000738!1.70e-34!140;CL:0000839!1.67e-33!70;CL:0002009!1.56e-31!65;CL:0002031!6.47e-29!124;CL:0000763!8.65e-28!112;CL:0000049!8.65e-28!112;CL:0002194!8.98e-28!63;CL:0000576!8.98e-28!63;CL:0000040!8.98e-28!63;CL:0000559!8.98e-28!63;CL:0000037!6.20e-26!172;CL:0000566!6.20e-26!172;CL:0002032!1.08e-24!165;CL:0000837!1.08e-24!165;CL:0000988!7.07e-24!182;CL:0002087!2.97e-23!119;CL:0002274!2.16e-10!5;CL:0000457!2.16e-10!5;CL:0002191!2.16e-10!5;CL:0000097!2.16e-10!5;CL:0000831!2.16e-10!5;CL:0002028!2.16e-10!5;CL:0000767!9.41e-10!3;CL:0002393!3.75e-08!9;CL:0002397!3.75e-08!9;CL:0001014!1.97e-07!2;CL:0001016!1.97e-07!2;CL:0000134!9.57e-07!358|ontology_enrichment_celltype_v019=CL:0000097;1.98e-26;5!CL:0000860;3.94e-24;33!CL:0002057;3.94e-24;33!CL:0000473;1.31e-17;39!CL:0000234;1.31e-17;39!CL:0000163;5.40e-15;9!CL:0000766;7.57e-13;69!CL:0000576;1.38e-09;48!CL:0000763;1.51e-09;100!CL:0000771;1.29e-08;2|ontology_enrichment_celltype_v019_2=CL:0000766,8.28e-27,72;CL:0000097,2.56e-26,5;CL:0002028,2.56e-26,5;CL:0000839,1.75e-24,66;CL:0000557,4.14e-24,67;CL:0000860,6.86e-21,42;CL:0002057,6.86e-21,42;CL:0000473,3.34e-18,48;CL:0000234,3.34e-18,48;CL:0000763,1.42e-17,108;CL:0000049,1.42e-17,108;CL:0000163,6.23e-15,9;CL:0002194,1.97e-14,59;CL:0000576,1.97e-14,59;CL:0000040,1.97e-14,59;CL:0000559,1.97e-14,59;CL:0002009,6.05e-14,61;CL:0000738,9.89e-14,136;CL:0002031,4.59e-13,120;CL:0002032,2.06e-11,161;CL:0000837,2.06e-11,161;CL:0000037,6.92e-11,168;CL:0000988,2.87e-10,177;CL:0000771,1.29e-08,2;CL:0002087,4.16e-07,115|ontology_enrichment_development_v019=CL:0002057;2.27e-14;42|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002371!8.03e-33!80;UBERON:0001474!6.25e-30!86;UBERON:0002390!4.94e-29!102;UBERON:0003061!4.94e-29!102;UBERON:0002193!1.32e-25!112;UBERON:0004765!3.32e-24!101;UBERON:0001434!3.32e-24!101;UBERON:0002405!1.27e-21!115;UBERON:0002204!2.52e-11!167;UBERON:0003081!1.08e-09!216|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.61e-21,76;UBERON:0001474,1.46e-19,82;UBERON:0004765,9.55e-18,90;UBERON:0002405,3.82e-17,93;UBERON:0002390,3.19e-16,98;UBERON:0003061,3.19e-16,98;UBERON:0001434,7.04e-16,100;UBERON:0002193,1.25e-14,108;UBERON:0002204,4.55e-09,167;UBERON:0003081,3.06e-07,203|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393364276848904,0.383829398097213,0.77408061658038,0,0,0,0,0,0,0,0.401088894940283,0.434021741431704,0,0,0,0.145398238779565,0,0.485168122375632,0.232429036905685,0.411167888021826,0.619412741790207,0.28769239232215,0,0.709446689665756,2.06847408441971,1.29096936716765,2.70852973188684,0,0,0.449446968890169,0.306083892370903,1.92557416245656,1.27867425159808,0,0,0.426224750532694,0,1.13477044938228,1.24564449799115,0.251248665256743,0.521482918420201,0.434377689410233,0,1.10483290796269,0.316462387440884,0.211255286311942,0,0.628975936525128,0,0,0,0,0,0.547992461293902,0,0,0,0,0,0,0,0,0,0,0.382273228125229,0,0,0,0,0.393010762749165,0.205601498999509,0,0,0.946895611469467,0,0,0.294605907474837,0.443067789167242,0.812411591295047,0.128091319725675,0.130059347559878,0,0,0,0,0,0,0,0,0.34362744548263,1.26509846009751,0,0,0,0,0,0,0,0,0,0,0.579297615531196,0,0,0,0,0,0,0,0,0,0,0,0.327447688744282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.87780264148325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.088048434013226,1.03664057770386,2.73827911492227,5.6809095041871,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.394061520403854,0,0.513372145118994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0.213455115606889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173624994933292,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.899895566206002,0.77380195455795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0,0.314408610199332,0.828478110694391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227662191351298,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126698501011437,0,0,0,0.250707539292375,0.757786982182394,1.07185652062471,0,0.103432995861895,0.213233981900981,0,0,0.124149428591716,0,0,0,0,0,0,0.143444410785353,0,0,0,0,0,0,0,0,0,0,0|short_description=p3@DNAI2}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=64446 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18744 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=60bp_to_uc002jkf.2,uc002jkg.2,uc010dfp.2_5end | |||
|coexpression_cluster_id=C168 | |||
|description=CAGE_peak_3_at_DNAI2_5end | |||
|id=chr17:72270457..72270470,+ | |||
|ontology_enrichment_celltype=CL:0002057!2.69e-46!42;CL:0000860!1.07e-42!45;CL:0000766!5.43e-40!76;CL:0000557!4.55e-38!71;CL:0000738!1.70e-34!140;CL:0000839!1.67e-33!70;CL:0002009!1.56e-31!65;CL:0002031!6.47e-29!124;CL:0000763!8.65e-28!112;CL:0000049!8.65e-28!112;CL:0002194!8.98e-28!63;CL:0000576!8.98e-28!63;CL:0000040!8.98e-28!63;CL:0000559!8.98e-28!63;CL:0000037!6.20e-26!172;CL:0000566!6.20e-26!172;CL:0002032!1.08e-24!165;CL:0000837!1.08e-24!165;CL:0000988!7.07e-24!182;CL:0002087!2.97e-23!119;CL:0002274!2.16e-10!5;CL:0000457!2.16e-10!5;CL:0002191!2.16e-10!5;CL:0000097!2.16e-10!5;CL:0000831!2.16e-10!5;CL:0002028!2.16e-10!5;CL:0000767!9.41e-10!3;CL:0002393!3.75e-08!9;CL:0002397!3.75e-08!9;CL:0001014!1.97e-07!2;CL:0001016!1.97e-07!2;CL:0000134!9.57e-07!358 | |||
|ontology_enrichment_celltype_v019=CL:0000097;1.98e-26;5!CL:0000860;3.94e-24;33!CL:0002057;3.94e-24;33!CL:0000473;1.31e-17;39!CL:0000234;1.31e-17;39!CL:0000163;5.40e-15;9!CL:0000766;7.57e-13;69!CL:0000576;1.38e-09;48!CL:0000763;1.51e-09;100!CL:0000771;1.29e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,8.28e-27,72;CL:0000097,2.56e-26,5;CL:0002028,2.56e-26,5;CL:0000839,1.75e-24,66;CL:0000557,4.14e-24,67;CL:0000860,6.86e-21,42;CL:0002057,6.86e-21,42;CL:0000473,3.34e-18,48;CL:0000234,3.34e-18,48;CL:0000763,1.42e-17,108;CL:0000049,1.42e-17,108;CL:0000163,6.23e-15,9;CL:0002194,1.97e-14,59;CL:0000576,1.97e-14,59;CL:0000040,1.97e-14,59;CL:0000559,1.97e-14,59;CL:0002009,6.05e-14,61;CL:0000738,9.89e-14,136;CL:0002031,4.59e-13,120;CL:0002032,2.06e-11,161;CL:0000837,2.06e-11,161;CL:0000037,6.92e-11,168;CL:0000988,2.87e-10,177;CL:0000771,1.29e-08,2;CL:0002087,4.16e-07,115 | |||
|ontology_enrichment_development_v019=CL:0002057;2.27e-14;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!8.03e-33!80;UBERON:0001474!6.25e-30!86;UBERON:0002390!4.94e-29!102;UBERON:0003061!4.94e-29!102;UBERON:0002193!1.32e-25!112;UBERON:0004765!3.32e-24!101;UBERON:0001434!3.32e-24!101;UBERON:0002405!1.27e-21!115;UBERON:0002204!2.52e-11!167;UBERON:0003081!1.08e-09!216 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.61e-21,76;UBERON:0001474,1.46e-19,82;UBERON:0004765,9.55e-18,90;UBERON:0002405,3.82e-17,93;UBERON:0002390,3.19e-16,98;UBERON:0003061,3.19e-16,98;UBERON:0001434,7.04e-16,100;UBERON:0002193,1.25e-14,108;UBERON:0002204,4.55e-09,167;UBERON:0003081,3.06e-07,203 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393364276848904,0.383829398097213,0.77408061658038,0,0,0,0,0,0,0,0.401088894940283,0.434021741431704,0,0,0,0.145398238779565,0,0.485168122375632,0.232429036905685,0.411167888021826,0.619412741790207,0.28769239232215,0,0.709446689665756,2.06847408441971,1.29096936716765,2.70852973188684,0,0,0.449446968890169,0.306083892370903,1.92557416245656,1.27867425159808,0,0,0.426224750532694,0,1.13477044938228,1.24564449799115,0.251248665256743,0.521482918420201,0.434377689410233,0,1.10483290796269,0.316462387440884,0.211255286311942,0,0.628975936525128,0,0,0,0,0,0.547992461293902,0,0,0,0,0,0,0,0,0,0,0.382273228125229,0,0,0,0,0.393010762749165,0.205601498999509,0,0,0.946895611469467,0,0,0.294605907474837,0.443067789167242,0.812411591295047,0.128091319725675,0.130059347559878,0,0,0,0,0,0,0,0,0.34362744548263,1.26509846009751,0,0,0,0,0,0,0,0,0,0,0.579297615531196,0,0,0,0,0,0,0,0,0,0,0,0.327447688744282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.87780264148325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.088048434013226,1.03664057770386,2.73827911492227,5.6809095041871,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.394061520403854,0,0.513372145118994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0.213455115606889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173624994933292,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.899895566206002,0.77380195455795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0,0.314408610199332,0.828478110694391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227662191351298,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126698501011437,0,0,0,0.250707539292375,0.757786982182394,1.07185652062471,0,0.103432995861895,0.213233981900981,0,0,0.124149428591716,0,0,0,0,0,0,0.143444410785353,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p3@DNAI2 | |||
}} |
Revision as of 15:29, 11 September 2013
Short description: | p3@DNAI2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_DNAI2_5end |
Coexpression cluster: | C168_Mast_CD14_immature_Basophils_Eosinophils_CD34_Peripheral |
Association with transcript: | 60bp_to_uc002jkf.2, uc002jkg.2, uc010dfp.2_5end |
EntrezGene: | DNAI2 |
HGNC: | 18744 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 8.28e-27 | 72 |
mast cell | 2.56e-26 | 5 |
basophil mast progenitor cell | 2.56e-26 | 5 |
myeloid lineage restricted progenitor cell | 1.75e-24 | 66 |
granulocyte monocyte progenitor cell | 4.14e-24 | 67 |
classical monocyte | 6.86e-21 | 42 |
CD14-positive, CD16-negative classical monocyte | 6.86e-21 | 42 |
defensive cell | 3.34e-18 | 48 |
phagocyte | 3.34e-18 | 48 |
myeloid cell | 1.42e-17 | 108 |
common myeloid progenitor | 1.42e-17 | 108 |
endocrine cell | 6.23e-15 | 9 |
monopoietic cell | 1.97e-14 | 59 |
monocyte | 1.97e-14 | 59 |
monoblast | 1.97e-14 | 59 |
promonocyte | 1.97e-14 | 59 |
macrophage dendritic cell progenitor | 6.05e-14 | 61 |
leukocyte | 9.89e-14 | 136 |
hematopoietic lineage restricted progenitor cell | 4.59e-13 | 120 |
hematopoietic oligopotent progenitor cell | 2.06e-11 | 161 |
hematopoietic multipotent progenitor cell | 2.06e-11 | 161 |
hematopoietic stem cell | 6.92e-11 | 168 |
hematopoietic cell | 2.87e-10 | 177 |
eosinophil | 1.29e-08 | 2 |
nongranular leukocyte | 4.16e-07 | 115 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.61e-21 | 76 |
bone element | 1.46e-19 | 82 |
skeletal element | 9.55e-18 | 90 |
immune system | 3.82e-17 | 93 |
hematopoietic system | 3.19e-16 | 98 |
blood island | 3.19e-16 | 98 |
skeletal system | 7.04e-16 | 100 |
hemolymphoid system | 1.25e-14 | 108 |
musculoskeletal system | 4.55e-09 | 167 |
lateral plate mesoderm | 3.06e-07 | 203 |
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