FFCP PHASE1:Hg19::chr1:245134406..245134424,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=W|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C1656|description=CAGE_peak_at_chr1:245134406..245134424,+|id=chr1:245134406..245134424,+|ontology_enrichment_celltype=CL:0000037!6.63e-37!172;CL:0000566!6.63e-37!172;CL:0000738!6.92e-37!140;CL:0000988!6.32e-36!182;CL:0002032!3.56e-33!165;CL:0000837!3.56e-33!165;CL:0002087!3.44e-32!119;CL:0002031!4.16e-31!124;CL:0000860!5.81e-20!45;CL:0002057!2.08e-19!42;CL:0000766!2.93e-18!76;CL:0000763!3.11e-18!112;CL:0000049!3.11e-18!112;CL:0000557!6.90e-18!71;CL:0002009!3.76e-17!65;CL:0002194!6.27e-16!63;CL:0000576!6.27e-16!63;CL:0000040!6.27e-16!63;CL:0000559!6.27e-16!63;CL:0000839!1.12e-15!70;CL:0000542!2.82e-14!53;CL:0000051!2.82e-14!53;CL:0000838!5.39e-14!52;CL:0002393!1.58e-08!9;CL:0002397!1.58e-08!9;CL:0002320!3.61e-08!365;CL:0000134!6.32e-08!358;CL:0000084!8.18e-08!25;CL:0000827!8.18e-08!25;CL:0000791!1.29e-07!18;CL:0000789!1.29e-07!18;CL:0002420!1.29e-07!18;CL:0002419!1.29e-07!18;CL:0000790!1.29e-07!18;CL:0000219!3.83e-07!390|ontology_enrichment_celltype_v019=CL:0002393;5.46e-17;6!CL:0002397;5.46e-17;6!CL:0000576;4.49e-13;48!CL:0000766;5.41e-13;69!CL:0000791;1.69e-12;18!CL:0000789;1.69e-12;18!CL:0002419;1.69e-12;18!CL:0000624;6.86e-11;6!CL:0000875;3.50e-09;3!CL:0002396;3.50e-09;3!CL:0000623;4.33e-09;3!CL:0000767;6.10e-09;3!CL:0002087;9.53e-09;104!CL:0000084;2.14e-08;25!CL:0000226;4.48e-08;3!CL:0000842;4.48e-08;3!CL:0000094;7.45e-08;8!CL:0000081;7.57e-08;11!CL:0000738;4.50e-07;136|ontology_enrichment_celltype_v019_2=CL:0000738,3.85e-39,136;CL:0000037,3.39e-35,168;CL:0000988,3.34e-34,177;CL:0002087,3.25e-31,115;CL:0002031,4.50e-31,120;CL:0002032,5.67e-31,161;CL:0000837,5.67e-31,161;CL:0000766,4.04e-25,72;CL:0002393,1.55e-24,9;CL:0002397,1.55e-24,9;CL:0000557,9.36e-24,67;CL:0002009,4.18e-21,61;CL:0000763,1.45e-20,108;CL:0000049,1.45e-20,108;CL:0000860,9.73e-20,42;CL:0002057,9.73e-20,42;CL:0000839,1.17e-18,66;CL:0000473,2.37e-18,48;CL:0000234,2.37e-18,48;CL:0002194,3.04e-18,59;CL:0000576,3.04e-18,59;CL:0000040,3.04e-18,59;CL:0000559,3.04e-18,59;CL:0000791,1.70e-12,18;CL:0000789,1.70e-12,18;CL:0002420,1.70e-12,18;CL:0002419,1.70e-12,18;CL:0000790,1.70e-12,18;CL:0000624,8.68e-11,6;CL:0000134,1.73e-10,354;CL:0002320,5.14e-10,361;CL:0000838,5.53e-10,52;CL:0000542,1.02e-09,53;CL:0000051,1.02e-09,53;CL:0000875,3.16e-09,3;CL:0002396,3.16e-09,3;CL:0000623,4.97e-09,3;CL:0000825,4.97e-09,3;CL:0000767,6.13e-09,3;CL:0000219,6.69e-09,386;CL:0000084,2.15e-08,25;CL:0000827,2.15e-08,25;CL:0000034,2.45e-08,441;CL:0000226,4.84e-08,3;CL:0000842,4.84e-08,3;CL:0000081,7.31e-08,11;CL:0000094,7.70e-08,8;CL:0000048,2.29e-07,427;CL:0000723,4.49e-07,433|ontology_enrichment_development_v019=CL:0002057;9.30e-14;42!CL:0000790;1.69e-12;18|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002371!2.99e-16!80;UBERON:0001474!2.68e-14!86;UBERON:0002390!2.97e-14!102;UBERON:0003061!2.97e-14!102;UBERON:0002193!4.82e-11!112;UBERON:0004765!4.89e-11!101;UBERON:0001434!4.89e-11!101;UBERON:0002405!5.75e-09!115;UBERON:0002384!1.49e-07!375|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002390,3.21e-22,98;UBERON:0003061,3.21e-22,98;UBERON:0002371,7.79e-22,76;UBERON:0001474,1.19e-19,82;UBERON:0002193,2.69e-19,108;UBERON:0002405,7.64e-18,93;UBERON:0004765,3.38e-17,90;UBERON:0001434,1.08e-14,100;UBERON:0002384,2.26e-09,371|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0.261185628199839,0,0,0,0,0.37129905888014,0.331397375727916,0,0,0,0,0.123121058076788,0.204000691244253,0,0.286235987131057,0.136874425072884,0,0.152826811495903,0.0821005894499457,0.157421562627358,5.11373559903575,2.68680578668049,4.02521920621798,0,0,0,0.619737604642413,0.284338464974843,5.5784083473621,4.43196326825502,5.61524452916397,6.2933152507597,0,0,0.257575567634187,0.436194716338694,0.755751887377619,0,0.929716147622738,0.411167888021826,1.23882548358041,0.28769239232215,0.512321413058201,0.945928919554341,0.689491361473237,2.5819387343353,4.06279459783025,0.941211697713023,0.545812300115692,1.34834090667051,0.918251677112708,0.320929027076094,0,0.329851300186716,0.997318288108159,0.852449501065388,0.290209238628584,0,0.622822248995575,1.25624332628372,1.0429658368404,1.52032191293582,1.81619850790011,0.736555271975129,0.632924774881769,4.64761629886272,7.44115049877652,5.03180749220102,3.14520167210186,2.10247649978109,2.89306056054744,5.13022938734247,3.38158351238453,5.84525292046829,0,0.546138611262131,3.55803701545422,0.426730222566507,1.20118796110804,0.574752439954483,0,0.954053754535364,1.70763890732835,1.17447437874188,0.764546456250458,7.93027971474155,2.24203425192614,2.37045676297569,2.360517241366,3.14408610199332,4.31763147898969,0,0.651844533267181,1.89379122293893,1.94826728407911,1.00269411196656,1.17842362989935,3.1014745241707,3.24964636518019,0.3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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=W | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C1656 | |||
|description=CAGE_peak_at_chr1:245134406..245134424,+ | |||
|id=chr1:245134406..245134424,+ | |||
|ontology_enrichment_celltype=CL:0000037!6.63e-37!172;CL:0000566!6.63e-37!172;CL:0000738!6.92e-37!140;CL:0000988!6.32e-36!182;CL:0002032!3.56e-33!165;CL:0000837!3.56e-33!165;CL:0002087!3.44e-32!119;CL:0002031!4.16e-31!124;CL:0000860!5.81e-20!45;CL:0002057!2.08e-19!42;CL:0000766!2.93e-18!76;CL:0000763!3.11e-18!112;CL:0000049!3.11e-18!112;CL:0000557!6.90e-18!71;CL:0002009!3.76e-17!65;CL:0002194!6.27e-16!63;CL:0000576!6.27e-16!63;CL:0000040!6.27e-16!63;CL:0000559!6.27e-16!63;CL:0000839!1.12e-15!70;CL:0000542!2.82e-14!53;CL:0000051!2.82e-14!53;CL:0000838!5.39e-14!52;CL:0002393!1.58e-08!9;CL:0002397!1.58e-08!9;CL:0002320!3.61e-08!365;CL:0000134!6.32e-08!358;CL:0000084!8.18e-08!25;CL:0000827!8.18e-08!25;CL:0000791!1.29e-07!18;CL:0000789!1.29e-07!18;CL:0002420!1.29e-07!18;CL:0002419!1.29e-07!18;CL:0000790!1.29e-07!18;CL:0000219!3.83e-07!390 | |||
|ontology_enrichment_celltype_v019=CL:0002393;5.46e-17;6!CL:0002397;5.46e-17;6!CL:0000576;4.49e-13;48!CL:0000766;5.41e-13;69!CL:0000791;1.69e-12;18!CL:0000789;1.69e-12;18!CL:0002419;1.69e-12;18!CL:0000624;6.86e-11;6!CL:0000875;3.50e-09;3!CL:0002396;3.50e-09;3!CL:0000623;4.33e-09;3!CL:0000767;6.10e-09;3!CL:0002087;9.53e-09;104!CL:0000084;2.14e-08;25!CL:0000226;4.48e-08;3!CL:0000842;4.48e-08;3!CL:0000094;7.45e-08;8!CL:0000081;7.57e-08;11!CL:0000738;4.50e-07;136 | |||
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|ontology_enrichment_development_v019=CL:0002057;9.30e-14;42!CL:0000790;1.69e-12;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!2.99e-16!80;UBERON:0001474!2.68e-14!86;UBERON:0002390!2.97e-14!102;UBERON:0003061!2.97e-14!102;UBERON:0002193!4.82e-11!112;UBERON:0004765!4.89e-11!101;UBERON:0001434!4.89e-11!101;UBERON:0002405!5.75e-09!115;UBERON:0002384!1.49e-07!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,3.21e-22,98;UBERON:0003061,3.21e-22,98;UBERON:0002371,7.79e-22,76;UBERON:0001474,1.19e-19,82;UBERON:0002193,2.69e-19,108;UBERON:0002405,7.64e-18,93;UBERON:0004765,3.38e-17,90;UBERON:0001434,1.08e-14,100;UBERON:0002384,2.26e-09,371 | |||
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| |||
|short_description=p@chr1:245134406..245134424,+ | |||
}} |
Revision as of 04:42, 12 September 2013
Short description: | p@chr1:245134406..245134424, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:245134406..245134424, + |
Coexpression cluster: | C1656_CD14CD16_CD14_CD4_Basophils_CD8_Natural_immature |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 3.21e-22 | 98 |
blood island | 3.21e-22 | 98 |
bone marrow | 7.79e-22 | 76 |
bone element | 1.19e-19 | 82 |
hemolymphoid system | 2.69e-19 | 108 |
immune system | 7.64e-18 | 93 |
skeletal element | 3.38e-17 | 90 |
skeletal system | 1.08e-14 | 100 |
connective tissue | 2.26e-09 | 371 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.