FFCP PHASE1:Hg19::chr1:46664258..46664266,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=W|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr1:46664258..46664266,+|id=chr1:46664258..46664266,+|ontology_enrichment_celltype=CL:0000542!7.42e-08!53;CL:0000051!7.42e-08!53;CL:0000838!2.96e-07!52;CL:0000084!3.55e-07!25;CL:0000827!3.55e-07!25|ontology_enrichment_celltype_v019=CL:0000084;4.57e-14;25!CL:0000791;9.10e-14;18!CL:0000789;9.10e-14;18!CL:0002419;9.10e-14;18!CL:0002127;1.12e-11;1!CL:0000911;1.12e-11;1!CL:0000814;1.12e-11;1!CL:0000895;2.96e-11;1!CL:0000624;1.57e-07;6|ontology_enrichment_celltype_v019_2=CL:0000893,3.47e-21,2;CL:0002489,3.47e-21,2;CL:0000809,3.47e-21,2;CL:0000808,3.47e-21,2;CL:0000894,3.47e-21,2;CL:0000806,3.47e-21,2;CL:0000807,3.47e-21,2;CL:0000805,3.47e-21,2;CL:0002425,3.47e-21,2;CL:0000084,3.76e-14,25;CL:0000827,3.76e-14,25;CL:0000791,7.24e-14,18;CL:0000789,7.24e-14,18;CL:0002420,7.24e-14,18;CL:0002419,7.24e-14,18;CL:0000790,7.24e-14,18;CL:0002127,9.57e-12,1;CL:0000914,9.57e-12,1;CL:0000911,9.57e-12,1;CL:0000814,9.57e-12,1;CL:0002042,9.57e-12,1;CL:0002039,9.57e-12,1;CL:0002040,9.57e-12,1;CL:0002041,9.57e-12,1;CL:0000810,3.28e-11,1;CL:0000895,3.28e-11,1;CL:0002436,3.28e-11,1;CL:0002427,3.28e-11,1;CL:0002428,3.28e-11,1;CL:0002429,3.28e-11,1;CL:0002433,3.28e-11,1;CL:0002431,3.28e-11,1;CL:0002432,3.28e-11,1;CL:0000838,7.93e-09,52;CL:0000542,1.20e-08,53;CL:0000051,1.20e-08,53;CL:0000624,1.34e-07,6|ontology_enrichment_development_v019=CL:0002425;3.64e-21;2!CL:0000790;9.10e-14;18!CL:0002427;2.96e-11;1|ontology_enrichment_disease=DOID:162!7.79e-10!235;DOID:14566!1.55e-09!239;DOID:305!3.53e-08!106;DOID:0050686!8.54e-07!137;DOID:0050687!9.23e-07!143|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!1.41e-08!94;UBERON:0001016!1.41e-08!94;UBERON:0001017!1.95e-08!82;UBERON:0005743!4.74e-08!86;UBERON:0000955!6.86e-08!69;UBERON:0006238!6.86e-08!69;UBERON:0001049!2.51e-07!57;UBERON:0005068!2.51e-07!57;UBERON:0006241!2.51e-07!57;UBERON:0007135!2.51e-07!57|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002370,4.45e-11,4;UBERON:0005058,4.45e-11,4;UBERON:0009113,4.45e-11,4;UBERON:0003295,4.45e-11,4;UBERON:0005562,4.45e-11,4;UBERON:0009722,9.89e-09,11;UBERON:0007690,9.89e-09,11;UBERON:0003351,1.13e-07,6|phase1_expression=0,0,0,0,0,0,2.53299878168311,0,0.261185628199839,0,0.697801167972428,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0,0,0,0,0.164201178899891,0,0,0,0,0,0,0,0.232401601740905,0,0,0.553995408531877,0.601633342410425,0,0,0,0,0,0,0,0,0,0,0,0,0.236482229888585,0,0,0,0,0,0.224723484445085,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393419540227666,0,1.85041349099558,0,0,0.473447805734733,0,0,0.294605907474837,0,0,0,0,0.164437904603676,0.276350017785848,0,0.296573126324121,0.267540828089713,1.04535523804977,0.113309342697566,1.14966148080576,0.34362744548263,0.759059076058509,0,0,0,0.150575119077773,0,0,0.236777252044017,0,1.20964045934839,0.802320587350522,1.15859523106239,0,0,0,0,0,0,0,0.486634870302636,0,0,0,0.0654895377488563,0,0,0,0,0,0.476981248610684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.81014194788176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300091096084402,0,0.257640540045629,0.18611685633159,0.337552664482532,0.0974370051611986,0,0,0,0.355009592516614,0.10075209822764,0,0,0,0,0.487894824518382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134831308160164,0.196221465125346,0,0,0,0,0,1.26755034821831,0,0,0.882926198829301,0,0,0,1.1240175325762,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141775097242386,0,0,0,0,0,0.414656231081544,0.144119953416961,0,0,0,1.17217447210047,0,0,0,0,0.112131084345361,0,0,0,0,0,0,0,0.257207374262142,0,0,0,0,0,0.325736184293735,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.91421374383171,0.197030760201927,1.72502059887614,0.513372145118994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117141414992713,0,0,0,0,0,0,0,0,0.413536052245775,0,0,0.303127571446259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920809889358963,0.229628896329213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0.178064071293475,0.165284915360978,0,0.127612712494584,0,0,0,0,0,0.532306030317022,0.869932992075073,0,0,0,0,0,0,0,0,0.78494864019923,0,0,0,0,0,0.421258456238981,0,0.243713489631284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0.229723400206959,0,0,0,0.238231775457789,0,0,0,0,0,0,0,0.743212700502875,0.28853842595289,0.0711418433484141,0,0,0,1.2700414963433,0,0,1.14117339516596,0,2.50634477090067,0,0,0,0.851692475380653,0.343505344755765,0,0,0,0.390776190804081,0,0,0,0,0,0,0,0,0.66866030566487,0.284136146806413,0,0,0,0,0.140669416410513,1.11308705022906,0.659215496907038,0.422250816255987,0.398495976502139,0,0,0.20453736500431,0.492339221844278,0,0.179736702294654,0.179021174675609,0,0,0,0,0,0.0927680981618513,1.99613798001194,0,0.437299999980979,0,0,0,0,0.344743373241465,0.291604613383254,0,0,0.844175070377856,0,0,0,0.219385397153973,0.10893846351899,0.557694977114413,0,0,0,0.0897576444097721,0,0,0,0,3.06579894587209,0,0,0,0,0,0.189753732724185,0,0,0.163232808159148,0.141353071433941,0,0,0,0,0.296521128680622,0,0,0.134802265961354,0,0,0,0.391329237864179,0,0,0,0,0,0.300646838828985,0.103688191397247,0,0.661983911750998,0,0,0,0,0,0.0979923974143777,0.435296032902013,0,0,0.19351266257817,0,0.246346371159628,0,0,0,0,0.19871461170299,0.126621591911757,0.195551382734803,0,0,0.19980960958213,0.144090417154106,0,0.686379991447858,0,0.124252535565433,0,0.135904206073614,0,0.611989305817931,0,0.600420288709789,0.136905378891993,0,0,0,0,0,0,0,0,0,0.201550417460179,0,0,0,0,0,0.295282444544246,0.254019996197353,0,0.136203406111576,0.482259445395058,0.550157746388935,0,0,2.32140586367385,0.121499113316049,0,0.157611414598396,0.104909176269996,0,0,0.575745591958336,0,0,0,0,0,0,0,0.246277562248017,0,0.113312091520126,0,0,0.258565912723101,0.13223260174269,0,0,0,0,0,0,0,0.121792598380896,0.638341257770182,0,0,0,0,0,0,0.122026264901963,0.751145584238999,0.573409195690071,0.110929051536852,0.124192805882767,0.138348634936231,0.249960815924213,0.454947352624943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.181848659202559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414775308455192,0,0,0,0,0,0.422624246717254,0.19998739585493,0,0.172214979660816,0,0.736423801007363,0,0,0.255788742607303,0,0.471797825567689,0.327628914576042,0,0,0,0,0,0.867479195013787,0.80057074828547,0,0,0.128458450192919,0,0.319267718114302,0.615349092722265,0,0.276629009856872,0.322951291263702,0,0.0981477185010256,0,0,0.231051332300676,0,0,0,0,0,0,0,0.163771917510097,0.147856086217045,0.135075169236789,0,0.206686796501184,0.126831620387814,0,0,0,0,0,0.535701835878287,0,0,0,0,0.230467975111559,0,0.203909198930495,0,0.354581522651905,0.111231401892069,0,0,0,0,0.215927591218621,0,0.0714765441766563,0.158013611732727,0.116241425368125,0,0,0,0,0,0,0,0.0852134047591577,0,0.22910686854405,0,0,0,0,0,0,0,0,0,0,0.198950775161368,0,0,0.219881033490858,0.150962843566674,0,0,0.470317296361523,0,0,0.392616934229891,0.594092800654172,0,0,0,0,0.199882311849858,0.357107877211315,1.05868461514708,0,0,0,0.860037498908708,0,0.135982980381829,0,0,0,0,0,1.13549782351571,0.437062287854782,0.126698501011437,0.203977659483963,0.534434810531121,0.18378979906969,0,0,0,0,0.103432995861895,0,0,0,0.496597714366863,0.560659312903067,0,0,0,0,0,0,0,0.569822880276821,0.320182037633146,0,0.359300808426348,0,0,0,0,0,0|short_description=p@chr1:46664258..46664266,+}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=W | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr1:46664258..46664266,+ | |||
|id=chr1:46664258..46664266,+ | |||
|ontology_enrichment_celltype=CL:0000542!7.42e-08!53;CL:0000051!7.42e-08!53;CL:0000838!2.96e-07!52;CL:0000084!3.55e-07!25;CL:0000827!3.55e-07!25 | |||
|ontology_enrichment_celltype_v019=CL:0000084;4.57e-14;25!CL:0000791;9.10e-14;18!CL:0000789;9.10e-14;18!CL:0002419;9.10e-14;18!CL:0002127;1.12e-11;1!CL:0000911;1.12e-11;1!CL:0000814;1.12e-11;1!CL:0000895;2.96e-11;1!CL:0000624;1.57e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000893,3.47e-21,2;CL:0002489,3.47e-21,2;CL:0000809,3.47e-21,2;CL:0000808,3.47e-21,2;CL:0000894,3.47e-21,2;CL:0000806,3.47e-21,2;CL:0000807,3.47e-21,2;CL:0000805,3.47e-21,2;CL:0002425,3.47e-21,2;CL:0000084,3.76e-14,25;CL:0000827,3.76e-14,25;CL:0000791,7.24e-14,18;CL:0000789,7.24e-14,18;CL:0002420,7.24e-14,18;CL:0002419,7.24e-14,18;CL:0000790,7.24e-14,18;CL:0002127,9.57e-12,1;CL:0000914,9.57e-12,1;CL:0000911,9.57e-12,1;CL:0000814,9.57e-12,1;CL:0002042,9.57e-12,1;CL:0002039,9.57e-12,1;CL:0002040,9.57e-12,1;CL:0002041,9.57e-12,1;CL:0000810,3.28e-11,1;CL:0000895,3.28e-11,1;CL:0002436,3.28e-11,1;CL:0002427,3.28e-11,1;CL:0002428,3.28e-11,1;CL:0002429,3.28e-11,1;CL:0002433,3.28e-11,1;CL:0002431,3.28e-11,1;CL:0002432,3.28e-11,1;CL:0000838,7.93e-09,52;CL:0000542,1.20e-08,53;CL:0000051,1.20e-08,53;CL:0000624,1.34e-07,6 | |||
|ontology_enrichment_development_v019=CL:0002425;3.64e-21;2!CL:0000790;9.10e-14;18!CL:0002427;2.96e-11;1 | |||
|ontology_enrichment_disease=DOID:162!7.79e-10!235;DOID:14566!1.55e-09!239;DOID:305!3.53e-08!106;DOID:0050686!8.54e-07!137;DOID:0050687!9.23e-07!143 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!1.41e-08!94;UBERON:0001016!1.41e-08!94;UBERON:0001017!1.95e-08!82;UBERON:0005743!4.74e-08!86;UBERON:0000955!6.86e-08!69;UBERON:0006238!6.86e-08!69;UBERON:0001049!2.51e-07!57;UBERON:0005068!2.51e-07!57;UBERON:0006241!2.51e-07!57;UBERON:0007135!2.51e-07!57 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,4.45e-11,4;UBERON:0005058,4.45e-11,4;UBERON:0009113,4.45e-11,4;UBERON:0003295,4.45e-11,4;UBERON:0005562,4.45e-11,4;UBERON:0009722,9.89e-09,11;UBERON:0007690,9.89e-09,11;UBERON:0003351,1.13e-07,6 | |||
|phase1_expression=0,0,0,0,0,0,2.53299878168311,0,0.261185628199839,0,0.697801167972428,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0,0,0,0,0.164201178899891,0,0,0,0,0,0,0,0.232401601740905,0,0,0.553995408531877,0.601633342410425,0,0,0,0,0,0,0,0,0,0,0,0,0.236482229888585,0,0,0,0,0,0.224723484445085,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393419540227666,0,1.85041349099558,0,0,0.473447805734733,0,0,0.294605907474837,0,0,0,0,0.164437904603676,0.276350017785848,0,0.296573126324121,0.267540828089713,1.04535523804977,0.113309342697566,1.14966148080576,0.34362744548263,0.759059076058509,0,0,0,0.150575119077773,0,0,0.236777252044017,0,1.20964045934839,0.802320587350522,1.15859523106239,0,0,0,0,0,0,0,0.486634870302636,0,0,0,0.0654895377488563,0,0,0,0,0,0.476981248610684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.81014194788176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300091096084402,0,0.257640540045629,0.18611685633159,0.337552664482532,0.0974370051611986,0,0,0,0.355009592516614,0.10075209822764,0,0,0,0,0.487894824518382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134831308160164,0.196221465125346,0,0,0,0,0,1.26755034821831,0,0,0.882926198829301,0,0,0,1.1240175325762,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141775097242386,0,0,0,0,0,0.414656231081544,0.144119953416961,0,0,0,1.17217447210047,0,0,0,0,0.112131084345361,0,0,0,0,0,0,0,0.257207374262142,0,0,0,0,0,0.325736184293735,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.91421374383171,0.197030760201927,1.72502059887614,0.513372145118994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117141414992713,0,0,0,0,0,0,0,0,0.413536052245775,0,0,0.303127571446259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920809889358963,0.229628896329213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0.178064071293475,0.165284915360978,0,0.127612712494584,0,0,0,0,0,0.532306030317022,0.869932992075073,0,0,0,0,0,0,0,0,0.78494864019923,0,0,0,0,0,0.421258456238981,0,0.243713489631284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0.229723400206959,0,0,0,0.238231775457789,0,0,0,0,0,0,0,0.743212700502875,0.28853842595289,0.0711418433484141,0,0,0,1.2700414963433,0,0,1.14117339516596,0,2.50634477090067,0,0,0,0.851692475380653,0.343505344755765,0,0,0,0.390776190804081,0,0,0,0,0,0,0,0,0.66866030566487,0.284136146806413,0,0,0,0,0.140669416410513,1.11308705022906,0.659215496907038,0.422250816255987,0.398495976502139,0,0,0.20453736500431,0.492339221844278,0,0.179736702294654,0.179021174675609,0,0,0,0,0,0.0927680981618513,1.99613798001194,0,0.437299999980979,0,0,0,0,0.344743373241465,0.291604613383254,0,0,0.844175070377856,0,0,0,0.219385397153973,0.10893846351899,0.557694977114413,0,0,0,0.0897576444097721,0,0,0,0,3.06579894587209,0,0,0,0,0,0.189753732724185,0,0,0.163232808159148,0.141353071433941,0,0,0,0,0.296521128680622,0,0,0.134802265961354,0,0,0,0.391329237864179,0,0,0,0,0,0.300646838828985,0.103688191397247,0,0.661983911750998,0,0,0,0,0,0.0979923974143777,0.435296032902013,0,0,0.19351266257817,0,0.246346371159628,0,0,0,0,0.19871461170299,0.126621591911757,0.195551382734803,0,0,0.19980960958213,0.144090417154106,0,0.686379991447858,0,0.124252535565433,0,0.135904206073614,0,0.611989305817931,0,0.600420288709789,0.136905378891993,0,0,0,0,0,0,0,0,0,0.201550417460179,0,0,0,0,0,0.295282444544246,0.254019996197353,0,0.136203406111576,0.482259445395058,0.550157746388935,0,0,2.32140586367385,0.121499113316049,0,0.157611414598396,0.104909176269996,0,0,0.575745591958336,0,0,0,0,0,0,0,0.246277562248017,0,0.113312091520126,0,0,0.258565912723101,0.13223260174269,0,0,0,0,0,0,0,0.121792598380896,0.638341257770182,0,0,0,0,0,0,0.122026264901963,0.751145584238999,0.573409195690071,0.110929051536852,0.124192805882767,0.138348634936231,0.249960815924213,0.454947352624943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.181848659202559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414775308455192,0,0,0,0,0,0.422624246717254,0.19998739585493,0,0.172214979660816,0,0.736423801007363,0,0,0.255788742607303,0,0.471797825567689,0.327628914576042,0,0,0,0,0,0.867479195013787,0.80057074828547,0,0,0.128458450192919,0,0.319267718114302,0.615349092722265,0,0.276629009856872,0.322951291263702,0,0.0981477185010256,0,0,0.231051332300676,0,0,0,0,0,0,0,0.163771917510097,0.147856086217045,0.135075169236789,0,0.206686796501184,0.126831620387814,0,0,0,0,0,0.535701835878287,0,0,0,0,0.230467975111559,0,0.203909198930495,0,0.354581522651905,0.111231401892069,0,0,0,0,0.215927591218621,0,0.0714765441766563,0.158013611732727,0.116241425368125,0,0,0,0,0,0,0,0.0852134047591577,0,0.22910686854405,0,0,0,0,0,0,0,0,0,0,0.198950775161368,0,0,0.219881033490858,0.150962843566674,0,0,0.470317296361523,0,0,0.392616934229891,0.594092800654172,0,0,0,0,0.199882311849858,0.357107877211315,1.05868461514708,0,0,0,0.860037498908708,0,0.135982980381829,0,0,0,0,0,1.13549782351571,0.437062287854782,0.126698501011437,0.203977659483963,0.534434810531121,0.18378979906969,0,0,0,0,0.103432995861895,0,0,0,0.496597714366863,0.560659312903067,0,0,0,0,0,0,0,0.569822880276821,0.320182037633146,0,0.359300808426348,0,0,0,0,0,0 | |||
|short_description=p@chr1:46664258..46664266,+ | |||
}} |
Revision as of 05:58, 12 September 2013
Short description: | p@chr1:46664258..46664266, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:46664258..46664266, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
thymus | 4.45e-11 | 4 |
hemolymphoid system gland | 4.45e-11 | 4 |
thymic region | 4.45e-11 | 4 |
pharyngeal gland | 4.45e-11 | 4 |
thymus primordium | 4.45e-11 | 4 |
entire pharyngeal arch endoderm | 9.89e-09 | 11 |
early pharyngeal endoderm | 9.89e-09 | 11 |
pharyngeal epithelium | 1.13e-07 | 6 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.