FFCP PHASE1:Hg19::chr1:62902937..62902960,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=7398|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding|HGNC=12607|TSSclassifier=S|UniProt=O94782|association_with_transcript=41bp_to_AF117386_5end|description=CAGE_peak_11_at_USP1_5end|id=chr1:62902937..62902960,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000062;9.25e-12;9!CL:0000764;8.05e-07;2!CL:0000558;8.05e-07;2!CL:1000415;8.05e-07;2|ontology_enrichment_celltype_v019_2=CL:0000062,8.86e-10,11;CL:0000375,8.86e-10,11;CL:0000335,8.86e-10,11;CL:1000415,7.61e-07,2;CL:0000764,9.54e-07,2;CL:0000765,9.54e-07,2;CL:0000050,9.54e-07,2;CL:0000038,9.54e-07,2;CL:0000558,9.54e-07,2;CL:0000547,9.54e-07,2;CL:0000549,9.54e-07,2;CL:0000550,9.54e-07,2;CL:0000552,9.54e-07,2|ontology_enrichment_development_v019=CL:0000335;1.01e-09;11!UBERON:0008947;1.96e-09;29|ontology_enrichment_disease=DOID:162!3.52e-28!235;DOID:14566!4.74e-27!239;DOID:305!1.13e-16!106;DOID:0050687!8.50e-16!143;DOID:0050686!2.83e-13!137;DOID:2531!2.04e-07!51;DOID:0060083!2.04e-07!51;DOID:1240!2.04e-07!39|ontology_enrichment_disease_v019=DOID:154;4.96e-07;2!DOID:4236;4.96e-07;2|ontology_enrichment_disease_v019_2=DOID:305,2.41e-07,106;DOID:154,5.11e-07,2;DOID:4236,5.11e-07,2|ontology_enrichment_uberon=UBERON:0001737!4.94e-08!9;UBERON:0001557!5.48e-08!19|ontology_enrichment_uberon_v019=UBERON:0001737;7.74e-20;9!UBERON:0001557;7.74e-20;9!UBERON:0000072;1.61e-07;37|ontology_enrichment_uberon_v019_2=UBERON:0001737,5.51e-20,9;UBERON:0001557,1.33e-09,19;UBERON:0008947,3.50e-07,38;UBERON:0003258,3.50e-07,38|phase1_expression=0,0,0,0,0.446961094427288,0,0,0,0,0,0,0,0,0.247532705920093,0,0,0,0,0,0,0.408001382488506,0,0,0.410623275218653,0.251085279189606,0.382067028739756,0.738905305049512,0.708397031823113,0,0.383829398097213,0,0,0,0,0.542270404062111,0,0,0,0,0,0,0,0,0,0,0,0.232429036905685,0,0,0,0,0.236482229888585,0.344745680736619,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.212604299965044,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0.167186495390678,0.32592226663359,0,0,0.445641827540694,0.294605907474837,0.221533894583621,0,0.384273959177026,0.390178042679635,0.986627427622057,0.276350017785848,0.289803085735052,0,0,0,0.113309342697566,0.383220493601921,0,0,0,0,0,0,0.127986611154418,0,0,0,0,0.267440195783507,0,0,0,0.255725123687061,0.722878304769133,0,0,0,0,0.189069634328136,0,0.175669571386252,0,0,0,0,0,0,0,0,0,0,0,0,0.56530794192401,0,0,0.208994966536811,0,0,0,0,0,0,0,0,0.0892997282840798,0.22452937262617,0.225222960966644,0,0,0,0,0,0,0.496971951695318,0.379891534993739,0,0,0.354668382198357,0,0,0.24666754841716,0.311211035399766,0.269421344139376,0.163461903113459,0.151357427644931,0,0,0,0.570471821544449,0.149448680551801,0.469737994575059,0.161872944368132,0.421352420106746,0,0.122834317311768,0.103325781175765,1.18800285728205,0,0,0,0.841680569770331,0.125118519871964,0.554128230968366,0.438977620880838,0,0.150238058906597,0.340296549480063,0.179389635688862,0.640672166455702,0,0.300091096084402,0.309157587715317,0,0,0.168776332241266,0.292311015483596,0,0.276149695926898,0,0,0,0.169560592310488,0,0,0,0,0.132529768321485,0,0.10366105501537,0,0,0,0,0,0,0,1.65629520055781,1.01150814046861,1.44606617930089,0.992645754591546,1.74303555273925,0.71181185733329,0.943819157121151,0.392442930250692,0.38474715694639,0,0,0,0,0,0,0,0,0.245976877086227,0.343135620597051,0,0,0.100528972411631,0,0,0,0,0,0,0.144366447761074,0,0.190254152234598,0,0,0,0,0.445893486866185,0,0,0,0.268675568108545,0.290633938513962,0,5.91195885475132,0.616339038092582,0.207328115540772,0.144119953416961,0.12624243342638,0.698476837213859,0,0,0,0.308482478109971,0.300343057843917,0,0,0,0.66004457238855,0.129271715757778,0,0,0,0,0,0,0.266422179016099,0,0,0,0.325736184293735,0.355391948742546,0,0,0,0,0,0,0,0,0,0,0,0,0.179060963239896,0.784596007954691,0,0,0,0,0,0,0.167516265334349,0.637938751653163,0,0,0,0.12269149171914,0,0,0,0.713715955188647,0,0.234282829985426,0.300946099727719,0,0,1.32845119707087,0.184369168541703,0.260650843404249,0,0,0,0,0.106727557803444,0,0,0,0.248107807818777,0,0,0,0,0,0,0.616838775210622,0.177561725313127,0.164254312027618,0.519254429183621,0.348631135379878,0.120859449591622,0,0,0.34444334449382,0,0,0.451199612907412,0.15403067420883,0,0,0,0,0,0.431831832204279,0,0,0,0,0,0,1.09629938322967,0.261435451024901,0,0,0,0,1.55668090191184,2.14524699793529,0,0,0,0,0.308097234229289,0.15350367472613,0.137836572484531,0,0.290033387828457,0.340906509664404,0.0890320356467374,0,0,0,0,0,0,0,0,0.532306030317022,0,0,0,0,0.632758849437452,0,0,0,0,0,0.179872457583315,0,0.117812402345686,0,0,0,0,0,0,0.136499911407986,0.141405431953713,0,0,0,0,0,0,0.202910376962704,0,0,0.143411352204052,0,0,0,0.211107635297664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213648142254946,0,0.980160863924127,0.371606350251437,0.28853842595289,0.782560276832555,0.159426272728822,0.59873811429845,0.5745161103971,0,0.324621940274555,0.280797178113459,0.456469358066384,0.94007937463814,0,1.01575066680962,0,0.4035994143820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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=7398 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=12607 | |||
|TSSclassifier=S | |||
|UniProt=O94782 | |||
|association_with_transcript=41bp_to_AF117386_5end | |||
|description=CAGE_peak_11_at_USP1_5end | |||
|id=chr1:62902937..62902960,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000062;9.25e-12;9!CL:0000764;8.05e-07;2!CL:0000558;8.05e-07;2!CL:1000415;8.05e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000062,8.86e-10,11;CL:0000375,8.86e-10,11;CL:0000335,8.86e-10,11;CL:1000415,7.61e-07,2;CL:0000764,9.54e-07,2;CL:0000765,9.54e-07,2;CL:0000050,9.54e-07,2;CL:0000038,9.54e-07,2;CL:0000558,9.54e-07,2;CL:0000547,9.54e-07,2;CL:0000549,9.54e-07,2;CL:0000550,9.54e-07,2;CL:0000552,9.54e-07,2 | |||
|ontology_enrichment_development_v019=CL:0000335;1.01e-09;11!UBERON:0008947;1.96e-09;29 | |||
|ontology_enrichment_disease=DOID:162!3.52e-28!235;DOID:14566!4.74e-27!239;DOID:305!1.13e-16!106;DOID:0050687!8.50e-16!143;DOID:0050686!2.83e-13!137;DOID:2531!2.04e-07!51;DOID:0060083!2.04e-07!51;DOID:1240!2.04e-07!39 | |||
|ontology_enrichment_disease_v019=DOID:154;4.96e-07;2!DOID:4236;4.96e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:305,2.41e-07,106;DOID:154,5.11e-07,2;DOID:4236,5.11e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0001737!4.94e-08!9;UBERON:0001557!5.48e-08!19 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;7.74e-20;9!UBERON:0001557;7.74e-20;9!UBERON:0000072;1.61e-07;37 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,5.51e-20,9;UBERON:0001557,1.33e-09,19;UBERON:0008947,3.50e-07,38;UBERON:0003258,3.50e-07,38 | |||
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| |||
|short_description=p11@USP1 | |||
}} |
Revision as of 06:22, 12 September 2013
Short description: | p11@USP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_11_at_USP1_5end |
Coexpression cluster: | NA |
Association with transcript: | 41bp_to_AF117386_5end |
EntrezGene: | USP1 |
HGNC: | 12607 |
UniProt: | O94782 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
osteoblast | 8.86e-10 | 11 |
osteoprogenitor cell | 8.86e-10 | 11 |
mesenchyme condensation cell | 8.86e-10 | 11 |
epithelial cell of gall bladder | 7.61e-07 | 2 |
erythroid lineage cell | 9.54e-07 | 2 |
erythroblast | 9.54e-07 | 2 |
megakaryocyte-erythroid progenitor cell | 9.54e-07 | 2 |
erythroid progenitor cell | 9.54e-07 | 2 |
reticulocyte | 9.54e-07 | 2 |
proerythroblast | 9.54e-07 | 2 |
basophilic erythroblast | 9.54e-07 | 2 |
polychromatophilic erythroblast | 9.54e-07 | 2 |
orthochromatic erythroblast | 9.54e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
larynx | 5.51e-20 | 9 |
upper respiratory tract | 1.33e-09 | 19 |
respiratory primordium | 3.50e-07 | 38 |
endoderm of foregut | 3.50e-07 | 38 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 2.41e-07 | 106 |
mixed cell type cancer | 5.11e-07 | 2 |
carcinosarcoma | 5.11e-07 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.