FFCP PHASE1:Hg19::chr1:89738528..89738557,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=115362|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=19895|TSSclassifier=S|UniProt=Q96PP8|association_with_transcript=0bp_to_ENST00000343435,NM_001134486,NM_052942,uc001dnc.2,uc001dnd.2_5end|coexpression_cluster_id=C7|description=CAGE_peak_1_at_GBP5_5end|id=chr1:89738528..89738557,-|ontology_enrichment_celltype=CL:0000037!1.82e-50!172;CL:0000566!1.82e-50!172;CL:0002032!2.09e-48!165;CL:0000837!2.09e-48!165;CL:0000738!1.32e-47!140;CL:0000988!8.28e-44!182;CL:0002087!3.99e-43!119;CL:0002031!8.35e-40!124;CL:0000766!8.46e-33!76;CL:0000763!8.55e-33!112;CL:0000049!8.55e-33!112;CL:0002194!1.01e-27!63;CL:0000576!1.01e-27!63;CL:0000040!1.01e-27!63;CL:0000559!1.01e-27!63;CL:0000557!6.76e-27!71;CL:0002009!9.17e-27!65;CL:0000839!8.39e-26!70;CL:0002057!1.65e-25!42;CL:0000860!7.64e-23!45;CL:0000838!3.68e-14!52;CL:0000791!1.44e-13!18;CL:0000789!1.44e-13!18;CL:0002420!1.44e-13!18;CL:0002419!1.44e-13!18;CL:0000790!1.44e-13!18;CL:0000542!1.59e-13!53;CL:0000051!1.59e-13!53;CL:0000134!1.13e-12!358;CL:0000084!1.46e-12!25;CL:0000827!1.46e-12!25;CL:0002320!2.61e-11!365;CL:0000625!4.22e-09!11;CL:0000219!5.83e-09!390|ontology_enrichment_celltype_v019=CL:0000860;3.31e-24;33!CL:0002057;3.31e-24;33!CL:0000576;5.56e-23;48!CL:0000473;4.17e-22;39!CL:0000234;4.17e-22;39!CL:0000766;2.79e-17;69!CL:0000791;3.29e-17;18!CL:0000789;3.29e-17;18!CL:0002419;3.29e-17;18!CL:0000084;9.80e-16;25!CL:0002087;1.61e-15;104!CL:0000763;1.74e-13;100!CL:0000738;3.02e-12;136!CL:0000625;2.20e-11;11!CL:0000988;2.15e-10;177!CL:0000542;1.30e-09;53!CL:0000094;2.78e-08;8|ontology_enrichment_celltype_v019_2=CL:0000037,1.09e-57,168;CL:0002032,1.71e-55,161;CL:0000837,1.71e-55,161;CL:0002087,3.35e-55,115;CL:0000738,7.42e-55,136;CL:0000988,2.80e-52,177;CL:0002031,7.91e-48,120;CL:0000766,1.53e-41,72;CL:0002194,4.10e-38,59;CL:0000576,4.10e-38,59;CL:0000040,4.10e-38,59;CL:0000559,4.10e-38,59;CL:0000763,1.16e-37,108;CL:0000049,1.16e-37,108;CL:0002009,4.22e-36,61;CL:0000473,6.97e-35,48;CL:0000234,6.97e-35,48;CL:0000557,3.18e-33,67;CL:0000839,7.47e-33,66;CL:0000860,8.67e-33,42;CL:0002057,8.67e-33,42;CL:0000134,2.25e-17,354;CL:0000791,3.34e-17,18;CL:0000789,3.34e-17,18;CL:0002420,3.34e-17,18;CL:0002419,3.34e-17,18;CL:0000790,3.34e-17,18;CL:0002320,3.67e-16,361;CL:0000838,7.31e-16,52;CL:0000084,9.74e-16,25;CL:0000827,9.74e-16,25;CL:0000542,2.68e-15,53;CL:0000051,2.68e-15,53;CL:0000219,2.30e-12,386;CL:0000625,2.21e-11,11;CL:0000048,3.40e-09,427;CL:0000034,1.18e-08,441;CL:0000723,1.56e-08,433;CL:0000094,2.76e-08,8;CL:0002393,1.67e-07,9;CL:0002397,1.67e-07,9|ontology_enrichment_development_v019=CL:0002057;1.18e-23;42!CL:0000790;3.29e-17;18!CL:0000049;3.73e-12;108!CL:0000051;1.30e-09;53|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!1.89e-28!102;UBERON:0003061!1.89e-28!102;UBERON:0002193!6.20e-25!112;UBERON:0002371!2.53e-21!80;UBERON:0001474!9.66e-18!86;UBERON:0007023!8.75e-16!115;UBERON:0002405!1.02e-15!115;UBERON:0004765!1.57e-14!101;UBERON:0001434!1.57e-14!101;UBERON:0002384!1.02e-10!375;UBERON:0003081!7.18e-07!216|ontology_enrichment_uberon_v019=UBERON:0000178;8.24e-08;15!UBERON:0000179;8.24e-08;15!UBERON:0000463;8.24e-08;15|ontology_enrichment_uberon_v019_2=UBERON:0002390,6.74e-38,98;UBERON:0003061,6.74e-38,98;UBERON:0002193,4.70e-34,108;UBERON:0002371,1.16e-27,76;UBERON:0002405,3.95e-27,93;UBERON:0001474,5.61e-24,82;UBERON:0004765,6.72e-20,90;UBERON:0001434,1.88e-18,100;UBERON:0002384,2.31e-15,371;UBERON:0003081,6.78e-12,203;UBERON:0000178,8.26e-08,15;UBERON:0000179,8.26e-08,15;UBERON:0000463,8.26e-08,15;UBERON:0007023,1.70e-07,114|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.03395087871065,0,0,0.487932798790507,0.123121058076788,0.204000691244253,0,0.572471974262113,1.36874425072884,0.376627918784408,0.534893840235659,0.246301768349837,0.236132343941038,39.3364276848904,100.56330230147,16.4105090715041,0,0,0.369754010166788,0,0,5.5784083473621,38.2256831886995,22.8620670115962,40.5810328238643,32.691659239029,40.1628145863535,30.9090681161024,22.1005322944938,6.04601509902095,16.2531320995837,32.3076361298902,5.75635043230556,17.6532631410209,1998.31135706966,1405.29763601865,1426.69729291783,75.8440497620561,14.846147722428,25.7310324529249,31.436470703615,5.45812300115692,22.9217954133986,137.737751566906,34.0184768700659,51.1469700639233,1591.20267210072,1370.31532786061,1222.8388092783,204.88772247178,86.2425541530532,137.020894779026,1161.52257948192,721.732359093559,1115.91628409489,285.74856524295,120.426786967934,206.333476611457,25.7731449300569,24.662098795945,18.8692780957538,14.4903934178979,14.7173354984676,18.6441680568613,27.0762106554186,26.6548347446781,26.1209739883427,24.6394742245852,24.5762375067959,24.016749854316,17.0692089026603,16.4162354684765,17.817325638589,15.2040320740518,23.8513438633841,12.5226853204079,14.6809297342735,9.17455747500549,13.2171328579026,14.0127140745384,1.580304508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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=115362 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19895 | |||
|TSSclassifier=S | |||
|UniProt=Q96PP8 | |||
|association_with_transcript=0bp_to_ENST00000343435,NM_001134486,NM_052942,uc001dnc.2,uc001dnd.2_5end | |||
|coexpression_cluster_id=C7 | |||
|description=CAGE_peak_1_at_GBP5_5end | |||
|id=chr1:89738528..89738557,- | |||
|ontology_enrichment_celltype=CL:0000037!1.82e-50!172;CL:0000566!1.82e-50!172;CL:0002032!2.09e-48!165;CL:0000837!2.09e-48!165;CL:0000738!1.32e-47!140;CL:0000988!8.28e-44!182;CL:0002087!3.99e-43!119;CL:0002031!8.35e-40!124;CL:0000766!8.46e-33!76;CL:0000763!8.55e-33!112;CL:0000049!8.55e-33!112;CL:0002194!1.01e-27!63;CL:0000576!1.01e-27!63;CL:0000040!1.01e-27!63;CL:0000559!1.01e-27!63;CL:0000557!6.76e-27!71;CL:0002009!9.17e-27!65;CL:0000839!8.39e-26!70;CL:0002057!1.65e-25!42;CL:0000860!7.64e-23!45;CL:0000838!3.68e-14!52;CL:0000791!1.44e-13!18;CL:0000789!1.44e-13!18;CL:0002420!1.44e-13!18;CL:0002419!1.44e-13!18;CL:0000790!1.44e-13!18;CL:0000542!1.59e-13!53;CL:0000051!1.59e-13!53;CL:0000134!1.13e-12!358;CL:0000084!1.46e-12!25;CL:0000827!1.46e-12!25;CL:0002320!2.61e-11!365;CL:0000625!4.22e-09!11;CL:0000219!5.83e-09!390 | |||
|ontology_enrichment_celltype_v019=CL:0000860;3.31e-24;33!CL:0002057;3.31e-24;33!CL:0000576;5.56e-23;48!CL:0000473;4.17e-22;39!CL:0000234;4.17e-22;39!CL:0000766;2.79e-17;69!CL:0000791;3.29e-17;18!CL:0000789;3.29e-17;18!CL:0002419;3.29e-17;18!CL:0000084;9.80e-16;25!CL:0002087;1.61e-15;104!CL:0000763;1.74e-13;100!CL:0000738;3.02e-12;136!CL:0000625;2.20e-11;11!CL:0000988;2.15e-10;177!CL:0000542;1.30e-09;53!CL:0000094;2.78e-08;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,1.09e-57,168;CL:0002032,1.71e-55,161;CL:0000837,1.71e-55,161;CL:0002087,3.35e-55,115;CL:0000738,7.42e-55,136;CL:0000988,2.80e-52,177;CL:0002031,7.91e-48,120;CL:0000766,1.53e-41,72;CL:0002194,4.10e-38,59;CL:0000576,4.10e-38,59;CL:0000040,4.10e-38,59;CL:0000559,4.10e-38,59;CL:0000763,1.16e-37,108;CL:0000049,1.16e-37,108;CL:0002009,4.22e-36,61;CL:0000473,6.97e-35,48;CL:0000234,6.97e-35,48;CL:0000557,3.18e-33,67;CL:0000839,7.47e-33,66;CL:0000860,8.67e-33,42;CL:0002057,8.67e-33,42;CL:0000134,2.25e-17,354;CL:0000791,3.34e-17,18;CL:0000789,3.34e-17,18;CL:0002420,3.34e-17,18;CL:0002419,3.34e-17,18;CL:0000790,3.34e-17,18;CL:0002320,3.67e-16,361;CL:0000838,7.31e-16,52;CL:0000084,9.74e-16,25;CL:0000827,9.74e-16,25;CL:0000542,2.68e-15,53;CL:0000051,2.68e-15,53;CL:0000219,2.30e-12,386;CL:0000625,2.21e-11,11;CL:0000048,3.40e-09,427;CL:0000034,1.18e-08,441;CL:0000723,1.56e-08,433;CL:0000094,2.76e-08,8;CL:0002393,1.67e-07,9;CL:0002397,1.67e-07,9 | |||
|ontology_enrichment_development_v019=CL:0002057;1.18e-23;42!CL:0000790;3.29e-17;18!CL:0000049;3.73e-12;108!CL:0000051;1.30e-09;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.89e-28!102;UBERON:0003061!1.89e-28!102;UBERON:0002193!6.20e-25!112;UBERON:0002371!2.53e-21!80;UBERON:0001474!9.66e-18!86;UBERON:0007023!8.75e-16!115;UBERON:0002405!1.02e-15!115;UBERON:0004765!1.57e-14!101;UBERON:0001434!1.57e-14!101;UBERON:0002384!1.02e-10!375;UBERON:0003081!7.18e-07!216 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;8.24e-08;15!UBERON:0000179;8.24e-08;15!UBERON:0000463;8.24e-08;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,6.74e-38,98;UBERON:0003061,6.74e-38,98;UBERON:0002193,4.70e-34,108;UBERON:0002371,1.16e-27,76;UBERON:0002405,3.95e-27,93;UBERON:0001474,5.61e-24,82;UBERON:0004765,6.72e-20,90;UBERON:0001434,1.88e-18,100;UBERON:0002384,2.31e-15,371;UBERON:0003081,6.78e-12,203;UBERON:0000178,8.26e-08,15;UBERON:0000179,8.26e-08,15;UBERON:0000463,8.26e-08,15;UBERON:0007023,1.70e-07,114 | |||
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| |||
|short_description=p1@GBP5 | |||
}} |
Revision as of 07:06, 12 September 2013
Short description: | p1@GBP5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_GBP5_5end |
Coexpression cluster: | C7_CD14_Eosinophils_Neutrophils_Smooth_Basophils_Macrophage_Mast |
Association with transcript: | 0bp_to_ENST00000343435, NM_001134486, NM_052942, uc001dnc.2, uc001dnd.2_5end |
EntrezGene: | GBP5 |
HGNC: | 19895 |
UniProt: | Q96PP8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 6.74e-38 | 98 |
blood island | 6.74e-38 | 98 |
hemolymphoid system | 4.70e-34 | 108 |
bone marrow | 1.16e-27 | 76 |
immune system | 3.95e-27 | 93 |
bone element | 5.61e-24 | 82 |
skeletal element | 6.72e-20 | 90 |
skeletal system | 1.88e-18 | 100 |
connective tissue | 2.31e-15 | 371 |
lateral plate mesoderm | 6.78e-12 | 203 |
blood | 8.26e-08 | 15 |
haemolymphatic fluid | 8.26e-08 | 15 |
organism substance | 8.26e-08 | 15 |
adult organism | 1.70e-07 | 114 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.