FFCP PHASE1:Mm9::chr10:12684058..12684084,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
| Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=74732|HGNC=|MCL_coexpression_id=3|UniProt=Q3U5V8,Q9D3G5|association_with_transcript=0bp_to_ENSMUST00000042861,ENSMUST00000163425,NM_001163590,NM_001163591,NM_029075,uc007ekg.2,uc007ekh.2,uc011xae.1_5end|description=CAGE_peak_1_at_Stx11_5end|id=chr10:12684058..12684084,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003081!8.07e-11!88;UBERON:0000926!5.40e-10!193;UBERON:0004120!5.40e-10!193;UBERON:0006603!5.40e-10!193;UBERON:0002204!5.52e-09!32;UBERON:0002193!3.93e-08!48;UBERON:0002405!2.65e-07!70;UBERON:0002390!3.69e-07!45;UBERON:0003061!3.69e-07!45|ontology_enrichment_uberon_v019_2=UBERON:0000926,3.52e-11,120;UBERON:0004120,3.52e-11,120;UBERON:0006603,3.52e-11,120;UBERON:0003081,1.24e-10,87;UBERON:0002204,6.54e-09,32;UBERON:0002193,2.08e-08,48;UBERON:0002405,2.08e-08,48;UBERON:0002390,2.15e-07,45;UBERON:0003061,2.15e-07,45;UBERON:0004872,6.23e-07,33|phase1_expression=0.160148847104794,9.77131141390211,17.2899710968024,0,0,7.89032577985882,5.13947809310157,8.13476937681931,4.78681655315667,9.12851652655775,6.50628279256919,6.54131703761759,0.513602189793617,0.174840804837995,13.3243904726265,16.1980213911861,27.9824751251259,6.94016763788123,5.75880621144103,3.39511721438424,2.21112554392781,2.38298282882125,1.30599894569468,5.91971964335605,8.25873411841812,6.89078356938024,13.7843838770904,10.5580904016086,0.380046838912748,0,6.43018480900384,6.98533740805594,2.46025915033828,0,0,0.166234645358492,0.204169356262369,166.575589033289,99.2295887545227,114.651699930262,174.11652045718,174.176598664404,157.790864735125,11.0789199818508,9.22530074097583,13.5824596599644,1.56478268869608,0.65407546914134,1.75748946187577,1.1665793944457,4.4795654920116,5.75010257459886,4.86569557567435,7.97898356212479,2.68875039313971,7.20326420900652,5.44413535883638,3.6097046459421,0,0,0,2.71075625655306,6.22506357277798,4.49949858640699,2.96659908770092,0.7104801149461,1.49800055259202,1.15265491596466,0.207379224616955,0,0.210324961351382,0.571301968807607,0.441737081903227,0,0,0,0,0.127687338085188,0.153606533256243,0.131886287730194,0.274462930807229,0,0,0.56276261003168,0.15279824777681,0.589257170947335,0.284743361598206,0.186399445825301,13.8578933799727,12.1670211771925,3.76823835312181,0.860423876981386,0,0,0,0,3.5111105032938,3.06774580640504,2.33807404142582,2.12003744706204,0.985903938436763,2.56652954828636,0,7.11066703153331,1.73192832808971,3.54703811665138,3.0331466700887,2.2836775943812,6.21450920753212,3.26572705942614,2.08182392119363,3.34912026143355,5.30415643688935,3.76806601381556,4.9387256996996,4.02133092254962,7.91023896749996,2.89198713839823,25.6537060065464,4.20593809863264,9.93786833071771,7.75800405016355,0,0.585561594023094,0,0.510914110417183,5.99075622529601,1.79970819298022,5.33694953706872,0.149790639404823,0,0.125654352112864,0,0,0,0,3.7680564624617,10.0769646194175,0,4.8401626853889,0.650602214813519,0.919608417733892,0.540186389416048,3.16480117455002,3.94611695077702,3.07472928683639,3.18585863503078,5.17406741478031,0.431135985865684,0.756424320671277,1.75951124163949,0.876782929710299,2.50242524303038,3.1342694986995,2.46938563689532,0.995171334092466,7.02213187313235,6.69104558498259,6.53576048609863,2.89976081549703,1.87620847984877,2.34080679899319,4.26140524053378,1.37734962223183,2.77680803197281,2.55787339225449,1.60964040839772,3.85325629811659,1.97471819896177,1.47750717671186,1.62137619091711,1.16959989940266,3.07370161407471,2.95254121272818,0.210289948564127,0.411618449517138,0.660837565967596,0.528901133327089,0.639864751605702,1.62565670302307,1.15980715189884,1.00841762311671,0.667134131534611,0.380451252225118,0,1.64698954724011,1.25667604400135,1.79060824837036,1.75467678407208,1.79763881730844,0.864552199498777,1.1948476395262,0.569003702859245,0.685491075658373,0,1.01825663922657,1.16371492300575,1.61312385747733,1.26473074248515,0.885660887877613,0.627994911365499,1.85095745882701,0.592905254174298,4.83850806576673,7.66580080941492,7.87017393346988,10.3458661908136,6.75296047306767,5.60176873919124,6.61701116136864,9.89024883327716,3.84385978463314,2.87536413054709,3.34926852901653,1.24815069245824,1.76805214562978,0.358794827043824,0.964887042726734,9.60716588866344,0.947457058852424,0.814824882210129,0.509235257325564,1.40814148973101,1.34005005953453,1.42826184531608,2.53673742215138,4.72905432318573,5.75808193086815,8.45110273884682,10.8149787712387,10.3610989119537,11.1379775107764,10.5553898757491,12.5098307278303,0.983528546038072,0.827810238914197,0.80275294993896,0.234423373184406,2.45902418065013,2.01976741763498,0,0,0.430846795465598,0.955875191810208,0.222798674082394,0.849229592366497,0.809621403349789,0,0,0.642642632843614,5.53566332312248,2.67098405500883,3.90928702448583,3.29940245945071,1.32745138339963,0.485561272309963,0.604647113929502,0.565815239267694,0,1.84461088766356,0.775284879504663,0.727067458955011,1.42598951353889,0,1.05418608574999,2.06271086496374,0.340439605753788,0.540183282093931,0.388076051348264,0.857348140126369,0.709360934569094,0.891844088010353,0.164549020602121,0.913394847343798,14.3149741918863,5.50763384245932,0.220528398054962,2.4732937941222,5.32832608096488,2.77439454669517,2.26807453605959,2.1338316966858,1.1659233465194,0.18542530201051,13.6696704638282,4.12773735926445,8.33375373163703,18.8368457004691,17.6335553760122,12.5827995263587,8.66889992968662,8.95689294871411,11.8851977471804,0.954670618015114,1.26534397432454,2.64315307264903,2.48412283890143,3.3454127362315,3.49380101993884,3.9110660451598,3.2234847732881,2.35580347785627,1.55537967950151,0,0,0.747582730219894,0.992750942742586,1.36115831840833,2.19571699912143,2.19642963138012,1.40828686374905,1.5624526181274,1.15345278868282,0.241584120826006,0.288030006257865,2.21207784439725,2.8381530140623,3.69759445793378,3.24802057444488,2.68540043501222,3.9736270956253,2.16351809135944,2.06765338044408,1.41353029927407,2.209997392995,2.01652370273681,2.63136277997332,2.21287235772758,3.62318396762864,9.52267611183888,4.43971906748129,1.61484941897056,3.35769232728157,7.53439416725543,11.2609485270709,3.29672923681077,8.36036678408357,0.501572104035363,0,0,0,0.171853182343688,0,0,0,0,0,0,0.518936737920883,0.399024873401031,2.04880326904961,2.91728060481953,1.88651846365184,2.20612210140017,2.44471400581777,0.824140228955577,2.88827288632634,1.51618327058278,1.77435509923168,2.45214243801899,1.77918864192777,1.79270426733634,2.01024141344646,0.952587382566147,2.54945517078682,2.89363830695558,0.412085900803307,0.883193520806384,1.71434626192708,1.77475806159337,1.1921809497366,2.61623549938191,1.59985946706062,2.03075058940024,2.37806364734604,2.36762740294059,2.17286582153379,2.24456908663095,2.25406534435931,1.77308068276014,1.22769312950907,1.08455788830176,2.50778594275484,1.24905288968973,1.87145286756327,3.43793686477277,2.48674831689496,3.75005412503176,3.2461496986859|short_description=p1@Stx11}} | ||
|EntrezGene=74732 | |||
|HGNC= | |||
|MCL_coexpression_id=3 | |||
|UniProt=Q3U5V8,Q9D3G5 | |||
|association_with_transcript=0bp_to_ENSMUST00000042861,ENSMUST00000163425,NM_001163590,NM_001163591,NM_029075,uc007ekg.2,uc007ekh.2,uc011xae.1_5end | |||
|description=CAGE_peak_1_at_Stx11_5end | |||
|id=chr10:12684058..12684084,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003081!8.07e-11!88;UBERON:0000926!5.40e-10!193;UBERON:0004120!5.40e-10!193;UBERON:0006603!5.40e-10!193;UBERON:0002204!5.52e-09!32;UBERON:0002193!3.93e-08!48;UBERON:0002405!2.65e-07!70;UBERON:0002390!3.69e-07!45;UBERON:0003061!3.69e-07!45 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000926,3.52e-11,120;UBERON:0004120,3.52e-11,120;UBERON:0006603,3.52e-11,120;UBERON:0003081,1.24e-10,87;UBERON:0002204,6.54e-09,32;UBERON:0002193,2.08e-08,48;UBERON:0002405,2.08e-08,48;UBERON:0002390,2.15e-07,45;UBERON:0003061,2.15e-07,45;UBERON:0004872,6.23e-07,33 | |||
|phase1_expression=0.160148847104794,9.77131141390211,17.2899710968024,0,0,7.89032577985882,5.13947809310157,8.13476937681931,4.78681655315667,9.12851652655775,6.50628279256919,6.54131703761759,0.513602189793617,0.174840804837995,13.3243904726265,16.1980213911861,27.9824751251259,6.94016763788123,5.75880621144103,3.39511721438424,2.21112554392781,2.38298282882125,1.30599894569468,5.91971964335605,8.25873411841812,6.89078356938024,13.7843838770904,10.5580904016086,0.380046838912748,0,6.43018480900384,6.98533740805594,2.46025915033828,0,0,0.166234645358492,0.204169356262369,166.575589033289,99.2295887545227,114.651699930262,174.11652045718,174.176598664404,157.790864735125,11.0789199818508,9.22530074097583,13.5824596599644,1.56478268869608,0.65407546914134,1.75748946187577,1.1665793944457,4.4795654920116,5.75010257459886,4.86569557567435,7.97898356212479,2.68875039313971,7.20326420900652,5.44413535883638,3.6097046459421,0,0,0,2.71075625655306,6.22506357277798,4.49949858640699,2.96659908770092,0.7104801149461,1.49800055259202,1.15265491596466,0.207379224616955,0,0.210324961351382,0.571301968807607,0.441737081903227,0,0,0,0,0.127687338085188,0.153606533256243,0.131886287730194,0.274462930807229,0,0,0.56276261003168,0.15279824777681,0.589257170947335,0.284743361598206,0.186399445825301,13.8578933799727,12.1670211771925,3.76823835312181,0.860423876981386,0,0,0,0,3.5111105032938,3.06774580640504,2.33807404142582,2.12003744706204,0.985903938436763,2.56652954828636,0,7.11066703153331,1.73192832808971,3.54703811665138,3.0331466700887,2.2836775943812,6.21450920753212,3.26572705942614,2.08182392119363,3.34912026143355,5.30415643688935,3.76806601381556,4.9387256996996,4.02133092254962,7.91023896749996,2.89198713839823,25.6537060065464,4.20593809863264,9.93786833071771,7.75800405016355,0,0.585561594023094,0,0.510914110417183,5.99075622529601,1.79970819298022,5.33694953706872,0.149790639404823,0,0.125654352112864,0,0,0,0,3.7680564624617,10.0769646194175,0,4.8401626853889,0.650602214813519,0.919608417733892,0.540186389416048,3.16480117455002,3.94611695077702,3.07472928683639,3.18585863503078,5.17406741478031,0.431135985865684,0.756424320671277,1.75951124163949,0.876782929710299,2.50242524303038,3.1342694986995,2.46938563689532,0.995171334092466,7.02213187313235,6.69104558498259,6.53576048609863,2.89976081549703,1.87620847984877,2.34080679899319,4.26140524053378,1.37734962223183,2.77680803197281,2.55787339225449,1.60964040839772,3.85325629811659,1.97471819896177,1.47750717671186,1.62137619091711,1.16959989940266,3.07370161407471,2.95254121272818,0.210289948564127,0.411618449517138,0.660837565967596,0.528901133327089,0.639864751605702,1.62565670302307,1.15980715189884,1.00841762311671,0.667134131534611,0.380451252225118,0,1.64698954724011,1.25667604400135,1.79060824837036,1.75467678407208,1.79763881730844,0.864552199498777,1.1948476395262,0.569003702859245,0.685491075658373,0,1.01825663922657,1.16371492300575,1.61312385747733,1.26473074248515,0.885660887877613,0.627994911365499,1.85095745882701,0.592905254174298,4.83850806576673,7.66580080941492,7.87017393346988,10.3458661908136,6.75296047306767,5.60176873919124,6.61701116136864,9.89024883327716,3.84385978463314,2.87536413054709,3.34926852901653,1.24815069245824,1.76805214562978,0.358794827043824,0.964887042726734,9.60716588866344,0.947457058852424,0.814824882210129,0.509235257325564,1.40814148973101,1.34005005953453,1.42826184531608,2.53673742215138,4.72905432318573,5.75808193086815,8.45110273884682,10.8149787712387,10.3610989119537,11.1379775107764,10.5553898757491,12.5098307278303,0.983528546038072,0.827810238914197,0.80275294993896,0.234423373184406,2.45902418065013,2.01976741763498,0,0,0.430846795465598,0.955875191810208,0.222798674082394,0.849229592366497,0.809621403349789,0,0,0.642642632843614,5.53566332312248,2.67098405500883,3.90928702448583,3.29940245945071,1.32745138339963,0.485561272309963,0.604647113929502,0.565815239267694,0,1.84461088766356,0.775284879504663,0.727067458955011,1.42598951353889,0,1.05418608574999,2.06271086496374,0.340439605753788,0.540183282093931,0.388076051348264,0.857348140126369,0.709360934569094,0.891844088010353,0.164549020602121,0.913394847343798,14.3149741918863,5.50763384245932,0.220528398054962,2.4732937941222,5.32832608096488,2.77439454669517,2.26807453605959,2.1338316966858,1.1659233465194,0.18542530201051,13.6696704638282,4.12773735926445,8.33375373163703,18.8368457004691,17.6335553760122,12.5827995263587,8.66889992968662,8.95689294871411,11.8851977471804,0.954670618015114,1.26534397432454,2.64315307264903,2.48412283890143,3.3454127362315,3.49380101993884,3.9110660451598,3.2234847732881,2.35580347785627,1.55537967950151,0,0,0.747582730219894,0.992750942742586,1.36115831840833,2.19571699912143,2.19642963138012,1.40828686374905,1.5624526181274,1.15345278868282,0.241584120826006,0.288030006257865,2.21207784439725,2.8381530140623,3.69759445793378,3.24802057444488,2.68540043501222,3.9736270956253,2.16351809135944,2.06765338044408,1.41353029927407,2.209997392995,2.01652370273681,2.63136277997332,2.21287235772758,3.62318396762864,9.52267611183888,4.43971906748129,1.61484941897056,3.35769232728157,7.53439416725543,11.2609485270709,3.29672923681077,8.36036678408357,0.501572104035363,0,0,0,0.171853182343688,0,0,0,0,0,0,0.518936737920883,0.399024873401031,2.04880326904961,2.91728060481953,1.88651846365184,2.20612210140017,2.44471400581777,0.824140228955577,2.88827288632634,1.51618327058278,1.77435509923168,2.45214243801899,1.77918864192777,1.79270426733634,2.01024141344646,0.952587382566147,2.54945517078682,2.89363830695558,0.412085900803307,0.883193520806384,1.71434626192708,1.77475806159337,1.1921809497366,2.61623549938191,1.59985946706062,2.03075058940024,2.37806364734604,2.36762740294059,2.17286582153379,2.24456908663095,2.25406534435931,1.77308068276014,1.22769312950907,1.08455788830176,2.50778594275484,1.24905288968973,1.87145286756327,3.43793686477277,2.48674831689496,3.75005412503176,3.2461496986859 | |||
|short_description=p1@Stx11 | |||
}} | |||
Revision as of 16:02, 12 September 2013
| Short description: | p1@Stx11 |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_1_at_Stx11_5end |
| Coexpression cluster: | MCL_coexpression_mm9:3 |
| Association with transcript: | 0bp_to_ENSMUST00000042861, ENSMUST00000163425, NM_001163590, NM_001163591, NM_029075, uc007ekg.2, uc007ekh.2, uc011xae.1_5end |
| EntrezGene: | Stx11 |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| mesoderm | 3.52e-11 | 120 |
| mesoderm-derived structure | 3.52e-11 | 120 |
| presumptive mesoderm | 3.52e-11 | 120 |
| lateral plate mesoderm | 1.24e-10 | 87 |
| musculoskeletal system | 6.54e-09 | 32 |
| hemolymphoid system | 2.08e-08 | 48 |
| immune system | 2.08e-08 | 48 |
| hematopoietic system | 2.15e-07 | 45 |
| blood island | 2.15e-07 | 45 |
| splanchnic layer of lateral plate mesoderm | 6.23e-07 | 33 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
