FFCP PHASE1:Mm9::chr10:28557361..28557365,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=4|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr10:28557361..28557365,+|id=chr10:28557361..28557365,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002370!2.48e-35!23;UBERON:0000974!2.48e-35!23;UBERON:0004807!2.48e-35!23;UBERON:0005058!2.48e-35!23;UBERON:0003351!2.48e-35!23;UBERON:0009113!2.48e-35!23;UBERON:0003295!2.48e-35!23;UBERON:0009722!2.48e-35!23;UBERON:0005562!2.48e-35!23;UBERON:0007690!2.48e-35!23;UBERON:0004177!2.63e-35!29;UBERON:0006562!9.57e-34!24;UBERON:0003408!9.57e-34!24;UBERON:0001557!9.57e-34!24;UBERON:0001042!9.57e-34!24;UBERON:0008814!9.57e-34!24;UBERON:0009145!9.57e-34!24;UBERON:0000072!1.09e-29!27;UBERON:0000063!2.86e-22!35;UBERON:0002390!1.18e-21!45;UBERON:0003061!1.18e-21!45;UBERON:0002193!4.16e-20!48;UBERON:0005057!9.71e-19!51;UBERON:0000065!1.34e-18!41;UBERON:0001004!4.33e-18!42;UBERON:0003929!3.82e-13!55;UBERON:0002405!8.60e-13!70;UBERON:0002530!2.26e-12!65;UBERON:0002368!8.22e-12!60;UBERON:0000490!1.77e-10!66;UBERON:0005911!6.72e-10!69;UBERON:0003081!1.61e-09!88;UBERON:0000949!2.28e-09!72;UBERON:0000064!2.94e-09!99;UBERON:0001041!5.77e-09!92;UBERON:0000077!2.45e-08!97;UBERON:0007811!2.23e-07!86|ontology_enrichment_uberon_v019_2=UBERON:0002370,1.61e-19,23;UBERON:0000974,1.61e-19,23;UBERON:0004807,1.61e-19,23;UBERON:0005058,1.61e-19,23;UBERON:0003351,1.61e-19,23;UBERON:0009113,1.61e-19,23;UBERON:0003295,1.61e-19,23;UBERON:0009722,1.61e-19,23;UBERON:0005562,1.61e-19,23;UBERON:0007690,1.61e-19,23;UBERON:0006562,9.72e-19,24;UBERON:0003408,9.72e-19,24;UBERON:0001557,9.72e-19,24;UBERON:0001042,9.72e-19,24;UBERON:0008814,9.72e-19,24;UBERON:0009145,9.72e-19,24;UBERON:0000072,9.73e-17,27;UBERON:0004177,1.24e-15,29;UBERON:0005057,1.24e-15,29;UBERON:0000077,4.53e-13,35;UBERON:0007811,1.00e-12,36;UBERON:0000065,2.99e-11,41;UBERON:0001004,5.35e-11,42;UBERON:0000153,9.33e-11,43;UBERON:0002390,2.64e-10,45;UBERON:0003061,2.64e-10,45;UBERON:0002193,1.07e-09,48;UBERON:0002405,1.07e-09,48;UBERON:0003929,1.55e-08,55;UBERON:0002368,7.20e-08,60;UBERON:0002530,2.65e-07,65;UBERON:0000490,3.36e-07,66;UBERON:0005911,6.58e-07,69|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.0797721589953364,0.513602189793617,0.34968160967599,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336093799142464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.491764273019036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164140899745061,0,0,0.170870880797853,0,0,0,0,0.228778173206523,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.632022241256357,0,0.308132871494482,0.389762468933385,0,0.39736270956253,0.480781798079875,1.18151621739662,0.504832249740738,0.457240839929999,1.31074040677893,1.55932609183604,1.25075394132428,1.05189211963412,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206035057238894,0,0,0,0,0.187283014939765,0.0640251524048693,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr10:28557361..28557365,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=4 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr10:28557361..28557365,+ | |||
|id=chr10:28557361..28557365,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002370!2.48e-35!23;UBERON:0000974!2.48e-35!23;UBERON:0004807!2.48e-35!23;UBERON:0005058!2.48e-35!23;UBERON:0003351!2.48e-35!23;UBERON:0009113!2.48e-35!23;UBERON:0003295!2.48e-35!23;UBERON:0009722!2.48e-35!23;UBERON:0005562!2.48e-35!23;UBERON:0007690!2.48e-35!23;UBERON:0004177!2.63e-35!29;UBERON:0006562!9.57e-34!24;UBERON:0003408!9.57e-34!24;UBERON:0001557!9.57e-34!24;UBERON:0001042!9.57e-34!24;UBERON:0008814!9.57e-34!24;UBERON:0009145!9.57e-34!24;UBERON:0000072!1.09e-29!27;UBERON:0000063!2.86e-22!35;UBERON:0002390!1.18e-21!45;UBERON:0003061!1.18e-21!45;UBERON:0002193!4.16e-20!48;UBERON:0005057!9.71e-19!51;UBERON:0000065!1.34e-18!41;UBERON:0001004!4.33e-18!42;UBERON:0003929!3.82e-13!55;UBERON:0002405!8.60e-13!70;UBERON:0002530!2.26e-12!65;UBERON:0002368!8.22e-12!60;UBERON:0000490!1.77e-10!66;UBERON:0005911!6.72e-10!69;UBERON:0003081!1.61e-09!88;UBERON:0000949!2.28e-09!72;UBERON:0000064!2.94e-09!99;UBERON:0001041!5.77e-09!92;UBERON:0000077!2.45e-08!97;UBERON:0007811!2.23e-07!86 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,1.61e-19,23;UBERON:0000974,1.61e-19,23;UBERON:0004807,1.61e-19,23;UBERON:0005058,1.61e-19,23;UBERON:0003351,1.61e-19,23;UBERON:0009113,1.61e-19,23;UBERON:0003295,1.61e-19,23;UBERON:0009722,1.61e-19,23;UBERON:0005562,1.61e-19,23;UBERON:0007690,1.61e-19,23;UBERON:0006562,9.72e-19,24;UBERON:0003408,9.72e-19,24;UBERON:0001557,9.72e-19,24;UBERON:0001042,9.72e-19,24;UBERON:0008814,9.72e-19,24;UBERON:0009145,9.72e-19,24;UBERON:0000072,9.73e-17,27;UBERON:0004177,1.24e-15,29;UBERON:0005057,1.24e-15,29;UBERON:0000077,4.53e-13,35;UBERON:0007811,1.00e-12,36;UBERON:0000065,2.99e-11,41;UBERON:0001004,5.35e-11,42;UBERON:0000153,9.33e-11,43;UBERON:0002390,2.64e-10,45;UBERON:0003061,2.64e-10,45;UBERON:0002193,1.07e-09,48;UBERON:0002405,1.07e-09,48;UBERON:0003929,1.55e-08,55;UBERON:0002368,7.20e-08,60;UBERON:0002530,2.65e-07,65;UBERON:0000490,3.36e-07,66;UBERON:0005911,6.58e-07,69 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.0797721589953364,0.513602189793617,0.34968160967599,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336093799142464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.491764273019036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164140899745061,0,0,0.170870880797853,0,0,0,0,0.228778173206523,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.632022241256357,0,0.308132871494482,0.389762468933385,0,0.39736270956253,0.480781798079875,1.18151621739662,0.504832249740738,0.457240839929999,1.31074040677893,1.55932609183604,1.25075394132428,1.05189211963412,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206035057238894,0,0,0,0,0.187283014939765,0.0640251524048693,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr10:28557361..28557365,+ | |||
}} |
Revision as of 16:32, 12 September 2013
Short description: | p@chr10:28557361..28557365, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:28557361..28557365, + |
Coexpression cluster: | MCL_coexpression_mm9:4 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
thymus | 1.61e-19 | 23 |
neck | 1.61e-19 | 23 |
respiratory system epithelium | 1.61e-19 | 23 |
hemolymphoid system gland | 1.61e-19 | 23 |
pharyngeal epithelium | 1.61e-19 | 23 |
thymic region | 1.61e-19 | 23 |
pharyngeal gland | 1.61e-19 | 23 |
entire pharyngeal arch endoderm | 1.61e-19 | 23 |
thymus primordium | 1.61e-19 | 23 |
early pharyngeal endoderm | 1.61e-19 | 23 |
pharynx | 9.72e-19 | 24 |
gland of gut | 9.72e-19 | 24 |
upper respiratory tract | 9.72e-19 | 24 |
chordate pharynx | 9.72e-19 | 24 |
pharyngeal arch system | 9.72e-19 | 24 |
pharyngeal region of foregut | 9.72e-19 | 24 |
segment of respiratory tract | 9.73e-17 | 27 |
hemopoietic organ | 1.24e-15 | 29 |
immune organ | 1.24e-15 | 29 |
mixed endoderm/mesoderm-derived structure | 4.53e-13 | 35 |
craniocervical region | 1.00e-12 | 36 |
respiratory tract | 2.99e-11 | 41 |
respiratory system | 5.35e-11 | 42 |
anterior region of body | 9.33e-11 | 43 |
hematopoietic system | 2.64e-10 | 45 |
blood island | 2.64e-10 | 45 |
hemolymphoid system | 1.07e-09 | 48 |
immune system | 1.07e-09 | 48 |
gut epithelium | 1.55e-08 | 55 |
endocrine gland | 7.20e-08 | 60 |
gland | 2.65e-07 | 65 |
unilaminar epithelium | 3.36e-07 | 66 |
endo-epithelium | 6.58e-07 | 69 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.