FFCP PHASE1:Hg19::chr2:75796811..75796828,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=84141|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=25816|TSSclassifier=S|UniProt=|association_with_transcript=0bp_to_ENST00000486696_5end|coexpression_cluster_id=C51|description=CAGE_peak_9_at_FAM176A_5end|id=chr2:75796811..75796828,-|ontology_enrichment_celltype=CL:0002541!1.26e-22!3;CL:0000349!1.69e-22!3;CL:0002577!1.69e-22!3;CL:0002536!8.66e-16!2|ontology_enrichment_celltype_v019=CL:0000349;2.99e-37;19!CL:0002541;1.95e-27;3!CL:0002577;4.07e-27;3!CL:0002536;2.47e-11;2!CL:0000047;3.52e-11;2|ontology_enrichment_celltype_v019_2=CL:0000349,3.18e-37,19;CL:0002541,1.39e-27,3;CL:0002577,4.65e-27,3;CL:0002536,2.47e-11,2|ontology_enrichment_development_v019=UBERON:0003124;5.71e-21;1!UBERON:0007297;2.23e-11;2|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005631!1.45e-50!14;UBERON:0000158!1.45e-50!14;UBERON:0003124!2.23e-50!7;UBERON:0001987!1.51e-29!4;UBERON:0004340!1.51e-29!4;UBERON:0000478!7.91e-29!24;UBERON:0000476!1.26e-22!3;UBERON:0000920!1.26e-22!3;UBERON:0004923!3.61e-11!57;UBERON:0006947!7.87e-11!3;UBERON:0004054!7.87e-11!3;UBERON:0004175!4.32e-10!25;UBERON:0000305!4.75e-10!7;UBERON:0001301!6.50e-09!1;UBERON:0004871!7.50e-09!8;UBERON:0001000!1.37e-08!1;UBERON:0005352!1.37e-08!1;UBERON:0005904!2.47e-08!4|ontology_enrichment_uberon_v019=UBERON:0001987;1.29e-44;4!UBERON:0000478;6.21e-40;24!UBERON:0005631;5.06e-32;10!UBERON:0000158;5.06e-32;10!UBERON:0003124;1.95e-27;3!UBERON:0000920;1.95e-27;3!UBERON:0001301;2.30e-21;1!UBERON:0000305;2.59e-12;7!UBERON:0006947;5.18e-08;3!UBERON:0004054;5.18e-08;3!UBERON:0000077;3.40e-07;27|ontology_enrichment_uberon_v019_2=UBERON:0003124,2.95e-70,7;UBERON:0005631,2.06e-68,14;UBERON:0000158,2.06e-68,14;UBERON:0001987,1.20e-44,4;UBERON:0004340,1.20e-44,4;UBERON:0000478,6.04e-40,24;UBERON:0000920,1.39e-27,3;UBERON:0001301,2.30e-21,1;UBERON:0004923,1.83e-14,66;UBERON:0004175,4.86e-13,25;UBERON:0000305,2.98e-12,7;UBERON:0004871,7.67e-11,8;UBERON:0006554,1.05e-10,47;UBERON:0001008,1.74e-10,48;UBERON:0000995,4.31e-09,21;UBERON:0005795,1.05e-08,22;UBERON:0003975,1.05e-08,22;UBERON:0006947,5.18e-08,3;UBERON:0004054,5.18e-08,3;UBERON:0003133,6.02e-07,48;UBERON:0000077,9.69e-07,29|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.873765488520689,2.37390280405608,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.458426764241994,0,0.741568885568859,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30139853857622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606255142892519,1.66435439510497,1.20956117331872,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0.15403067420883,0,0,0,0,0,0,0,0,0,0.254876273045038,0,0,0,0,0,0,0,0.721287081534056,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0,0,0,0,0,0,0,0.564862804660675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19372242368845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.723578631752448,0,0,0,0,0,0,0,0,0,0,0,1.91400695839152,0.183195186803725,5.86338253620498,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.789168805698781,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.66926003308263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.27459926641581,0.996637174564964,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.86274977341542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116241425368125,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103432995861895,0,0,0,0.434523000071005,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p9@FAM176A}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=84141 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25816 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000486696_5end | |||
|coexpression_cluster_id=C51 | |||
|description=CAGE_peak_9_at_FAM176A_5end | |||
|id=chr2:75796811..75796828,- | |||
|ontology_enrichment_celltype=CL:0002541!1.26e-22!3;CL:0000349!1.69e-22!3;CL:0002577!1.69e-22!3;CL:0002536!8.66e-16!2 | |||
|ontology_enrichment_celltype_v019=CL:0000349;2.99e-37;19!CL:0002541;1.95e-27;3!CL:0002577;4.07e-27;3!CL:0002536;2.47e-11;2!CL:0000047;3.52e-11;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,3.18e-37,19;CL:0002541,1.39e-27,3;CL:0002577,4.65e-27,3;CL:0002536,2.47e-11,2 | |||
|ontology_enrichment_development_v019=UBERON:0003124;5.71e-21;1!UBERON:0007297;2.23e-11;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!1.45e-50!14;UBERON:0000158!1.45e-50!14;UBERON:0003124!2.23e-50!7;UBERON:0001987!1.51e-29!4;UBERON:0004340!1.51e-29!4;UBERON:0000478!7.91e-29!24;UBERON:0000476!1.26e-22!3;UBERON:0000920!1.26e-22!3;UBERON:0004923!3.61e-11!57;UBERON:0006947!7.87e-11!3;UBERON:0004054!7.87e-11!3;UBERON:0004175!4.32e-10!25;UBERON:0000305!4.75e-10!7;UBERON:0001301!6.50e-09!1;UBERON:0004871!7.50e-09!8;UBERON:0001000!1.37e-08!1;UBERON:0005352!1.37e-08!1;UBERON:0005904!2.47e-08!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0001987;1.29e-44;4!UBERON:0000478;6.21e-40;24!UBERON:0005631;5.06e-32;10!UBERON:0000158;5.06e-32;10!UBERON:0003124;1.95e-27;3!UBERON:0000920;1.95e-27;3!UBERON:0001301;2.30e-21;1!UBERON:0000305;2.59e-12;7!UBERON:0006947;5.18e-08;3!UBERON:0004054;5.18e-08;3!UBERON:0000077;3.40e-07;27 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003124,2.95e-70,7;UBERON:0005631,2.06e-68,14;UBERON:0000158,2.06e-68,14;UBERON:0001987,1.20e-44,4;UBERON:0004340,1.20e-44,4;UBERON:0000478,6.04e-40,24;UBERON:0000920,1.39e-27,3;UBERON:0001301,2.30e-21,1;UBERON:0004923,1.83e-14,66;UBERON:0004175,4.86e-13,25;UBERON:0000305,2.98e-12,7;UBERON:0004871,7.67e-11,8;UBERON:0006554,1.05e-10,47;UBERON:0001008,1.74e-10,48;UBERON:0000995,4.31e-09,21;UBERON:0005795,1.05e-08,22;UBERON:0003975,1.05e-08,22;UBERON:0006947,5.18e-08,3;UBERON:0004054,5.18e-08,3;UBERON:0003133,6.02e-07,48;UBERON:0000077,9.69e-07,29 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.873765488520689,2.37390280405608,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.458426764241994,0,0.741568885568859,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30139853857622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606255142892519,1.66435439510497,1.20956117331872,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0.15403067420883,0,0,0,0,0,0,0,0,0,0.254876273045038,0,0,0,0,0,0,0,0.721287081534056,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0,0,0,0,0,0,0,0.564862804660675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19372242368845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.723578631752448,0,0,0,0,0,0,0,0,0,0,0,1.91400695839152,0.183195186803725,5.86338253620498,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.789168805698781,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.66926003308263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.27459926641581,0.996637174564964,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.86274977341542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116241425368125,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103432995861895,0,0,0,0.434523000071005,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p9@FAM176A | |||
}} |
Revision as of 19:51, 12 September 2013
Short description: | p9@FAM176A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_9_at_FAM176A_5end |
Coexpression cluster: | C51_kidney_mesothelioma_renal_signet_gall_lung_pancreas |
Association with transcript: | 0bp_to_ENST00000486696_5end |
EntrezGene: | FAM176A |
HGNC: | 25816 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 3.18e-37 | 19 |
chorionic membrane mesenchymal stem cell | 1.39e-27 | 3 |
placental epithelial cell | 4.65e-27 | 3 |
amniotic epithelial cell | 2.47e-11 | 2 |
Ontology term | p-value | n |
---|---|---|
chorion | 2.95e-70 | 7 |
extraembryonic membrane | 2.06e-68 | 14 |
membranous layer | 2.06e-68 | 14 |
placenta | 1.20e-44 | 4 |
allantois | 1.20e-44 | 4 |
extraembryonic structure | 6.04e-40 | 24 |
egg chorion | 1.39e-27 | 3 |
epididymis | 2.30e-21 | 1 |
organ component layer | 1.83e-14 | 66 |
internal genitalia | 4.86e-13 | 25 |
amnion | 2.98e-12 | 7 |
somatic layer of lateral plate mesoderm | 7.67e-11 | 8 |
urinary system structure | 1.05e-10 | 47 |
renal system | 1.74e-10 | 48 |
uterus | 4.31e-09 | 21 |
embryonic uterus | 1.05e-08 | 22 |
internal female genitalia | 1.05e-08 | 22 |
male genital duct | 5.18e-08 | 3 |
internal male genitalia | 5.18e-08 | 3 |
reproductive organ | 6.02e-07 | 48 |
mixed endoderm/mesoderm-derived structure | 9.69e-07 | 29 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.