FFCP PHASE1:Hg19::chr3:149086808..149086812,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr3:149086808..149086812,+|id=chr3:149086808..149086812,+|ontology_enrichment_celltype=CL:0002139!6.01e-08!24;CL:0002494!2.70e-07!16|ontology_enrichment_celltype_v019=CL:0002592;7.01e-15;3!CL:0002557;8.62e-12;1!CL:0002379;8.62e-12;1!CL:0002595;1.87e-09;5|ontology_enrichment_celltype_v019_2=CL:0002592,9.30e-15,3;CL:0002379,5.62e-12,1;CL:0002557,1.07e-11,1;CL:0002595,1.76e-09,5|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:305!8.08e-08!106|ontology_enrichment_disease_v019=DOID:3620;8.62e-12;1!DOID:3565;8.62e-12;1!DOID:5662;8.62e-12;1|ontology_enrichment_disease_v019_2=DOID:3620,5.62e-12,1;DOID:3565,5.62e-12,1;DOID:5662,1.63e-11,1|ontology_enrichment_uberon=UBERON:0001737!3.45e-11!9;UBERON:0003104!8.22e-09!238;UBERON:0009142!8.22e-09!238;UBERON:0000926!1.59e-07!448;UBERON:0004120!1.59e-07!448;UBERON:0006603!1.59e-07!448;UBERON:0004872!5.45e-07!84;UBERON:0000477!6.73e-07!286;UBERON:0000055!7.97e-07!69|ontology_enrichment_uberon_v019=UBERON:0003498;7.01e-15;3!UBERON:0005985;7.01e-15;3!UBERON:0001621;7.01e-15;3!UBERON:0007195;3.45e-12;1!UBERON:0003834;1.87e-09;5!UBERON:0001533;1.87e-09;5!UBERON:0003513;5.42e-07;7|ontology_enrichment_uberon_v019_2=UBERON:0003498,3.38e-19,5;UBERON:0005985,3.38e-19,5;UBERON:0001621,9.30e-15,3;UBERON:0007195,3.27e-12,1;UBERON:0003834,1.76e-09,5;UBERON:0001533,1.76e-09,5;UBERON:0000948,4.18e-07,24;UBERON:0005498,4.18e-07,24;UBERON:0004140,4.18e-07,24;UBERON:0009881,4.18e-07,24;UBERON:0004141,4.18e-07,24;UBERON:0003084,4.18e-07,24;UBERON:0007005,4.18e-07,24;UBERON:0004139,4.18e-07,24;UBERON:0004291,4.18e-07,24;UBERON:0003513,5.19e-07,7;UBERON:0000055,5.95e-07,68|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.74259811776028,1.32558950291166,0,0,0,0.975865597581014,0,0,0,0,0,0,0,0,0,0,0,0,0.919421224478927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0.361439152384566,0.50133791063589,0.144846518960824,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0.347140501607594,0,0,0,0.208994966536811,3.6178346283706,0,0,0.805658634218294,3.80136052859256,0.24406205754817,0.735326160691737,0.81014194788176,0.267899184852239,0,0,0,0,0.183201743930407,0,0,0,0,0,0,0,0,0,1.06748995729705,0,0,0.404132016209064,0.980771418680752,0.151357427644931,0,0,0,0,0.298897361103602,0.117434498643765,0.323745888736263,0,0,0,0,0,0,0,0,0.168336113954066,0,0,0,0.30648779579902,0.150238058906597,1.13432183160021,0,0,0,0,0,0,0,0.168776332241266,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354920400119532,0.337169380156203,0.241011029883482,0.882351781859152,0.217879444092406,0,1.21348177344148,0.196221465125346,0.769494313892781,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.462985512576611,0.761016608938393,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325736184293735,0.355391948742546,0,0.301439377059586,0,0.199945982364114,0,0,0,0,1.14861935834114,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.542530047399471,0,0.356857977594324,0,0.117141414992713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116210378459959,0,0,0,0.114814448164607,0,0,0,0,0,0,0,0,0.850468526382578,0.215915916102139,0,0,0,0,0,0,0,0,0.256450125116389,0.328014645699706,0.325378394664303,0.103041011647722,0,0,0,0,0,0,0.154048617114644,0,0,0.107420244868274,0.145016693914229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.01091240786658,1.58510321173008,0.421258456238981,0,0.487426979262569,2.11300293513511,0,0,0,0,1.32687795048244,0.876901770507525,0,0,0,0,0.563391205064483,0,0,0,0.709522128141196,0.211107635297664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.47748896947538,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0898683511473268,1.07412704805365,0,0.197286811273867,0,2.22273980289274,0,0,0,0,0,0,0,0.254253650292766,0,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0,0,0,0,0,0.638002319463839,0,0,0,0.156980256395025,0,0,0,0,0,0,1.05499032264014,0.326465616318295,0,0,0,0,0,0,0,0,0,0,0,0,0,0.728341138602278,0,0,0,0,0,0,0,0.330991955875499,0.941798755221676,0,0,0.416024019039416,0,0,0,0,0.51595809741485,0.677294319023596,0,0.410577285266046,0,0,0,0,0.19871461170299,0,0,0,0,0,0.144090417154106,0,0,0.288109595976299,0,0,0,0.104602846312333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.105600336519406,0.179287339332845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171086837884329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124980407962107,0,0,1.6468607378872,0,0,0,0,0,0,0.50313580350515,1.77962244319307,0,0.151230923763239,0,0.295710299979268,0,0,0,0,0.265841714557995,0,0,0,0,0,0,0,0.398095888698616,0,0,0,0,0,1.71553273099941,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr3:149086808..149086812,+ | |||
|id=chr3:149086808..149086812,+ | |||
|ontology_enrichment_celltype=CL:0002139!6.01e-08!24;CL:0002494!2.70e-07!16 | |||
|ontology_enrichment_celltype_v019=CL:0002592;7.01e-15;3!CL:0002557;8.62e-12;1!CL:0002379;8.62e-12;1!CL:0002595;1.87e-09;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002592,9.30e-15,3;CL:0002379,5.62e-12,1;CL:0002557,1.07e-11,1;CL:0002595,1.76e-09,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!8.08e-08!106 | |||
|ontology_enrichment_disease_v019=DOID:3620;8.62e-12;1!DOID:3565;8.62e-12;1!DOID:5662;8.62e-12;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3620,5.62e-12,1;DOID:3565,5.62e-12,1;DOID:5662,1.63e-11,1 | |||
|ontology_enrichment_uberon=UBERON:0001737!3.45e-11!9;UBERON:0003104!8.22e-09!238;UBERON:0009142!8.22e-09!238;UBERON:0000926!1.59e-07!448;UBERON:0004120!1.59e-07!448;UBERON:0006603!1.59e-07!448;UBERON:0004872!5.45e-07!84;UBERON:0000477!6.73e-07!286;UBERON:0000055!7.97e-07!69 | |||
|ontology_enrichment_uberon_v019=UBERON:0003498;7.01e-15;3!UBERON:0005985;7.01e-15;3!UBERON:0001621;7.01e-15;3!UBERON:0007195;3.45e-12;1!UBERON:0003834;1.87e-09;5!UBERON:0001533;1.87e-09;5!UBERON:0003513;5.42e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003498,3.38e-19,5;UBERON:0005985,3.38e-19,5;UBERON:0001621,9.30e-15,3;UBERON:0007195,3.27e-12,1;UBERON:0003834,1.76e-09,5;UBERON:0001533,1.76e-09,5;UBERON:0000948,4.18e-07,24;UBERON:0005498,4.18e-07,24;UBERON:0004140,4.18e-07,24;UBERON:0009881,4.18e-07,24;UBERON:0004141,4.18e-07,24;UBERON:0003084,4.18e-07,24;UBERON:0007005,4.18e-07,24;UBERON:0004139,4.18e-07,24;UBERON:0004291,4.18e-07,24;UBERON:0003513,5.19e-07,7;UBERON:0000055,5.95e-07,68 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.74259811776028,1.32558950291166,0,0,0,0.975865597581014,0,0,0,0,0,0,0,0,0,0,0,0,0.919421224478927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0.361439152384566,0.50133791063589,0.144846518960824,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0.347140501607594,0,0,0,0.208994966536811,3.6178346283706,0,0,0.805658634218294,3.80136052859256,0.24406205754817,0.735326160691737,0.81014194788176,0.267899184852239,0,0,0,0,0.183201743930407,0,0,0,0,0,0,0,0,0,1.06748995729705,0,0,0.404132016209064,0.980771418680752,0.151357427644931,0,0,0,0,0.298897361103602,0.117434498643765,0.323745888736263,0,0,0,0,0,0,0,0,0.168336113954066,0,0,0,0.30648779579902,0.150238058906597,1.13432183160021,0,0,0,0,0,0,0,0.168776332241266,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354920400119532,0.337169380156203,0.241011029883482,0.882351781859152,0.217879444092406,0,1.21348177344148,0.196221465125346,0.769494313892781,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.462985512576611,0.761016608938393,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325736184293735,0.355391948742546,0,0.301439377059586,0,0.199945982364114,0,0,0,0,1.14861935834114,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.542530047399471,0,0.356857977594324,0,0.117141414992713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116210378459959,0,0,0,0.114814448164607,0,0,0,0,0,0,0,0,0.850468526382578,0.215915916102139,0,0,0,0,0,0,0,0,0.256450125116389,0.328014645699706,0.325378394664303,0.103041011647722,0,0,0,0,0,0,0.154048617114644,0,0,0.107420244868274,0.145016693914229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.01091240786658,1.58510321173008,0.421258456238981,0,0.487426979262569,2.11300293513511,0,0,0,0,1.32687795048244,0.876901770507525,0,0,0,0,0.563391205064483,0,0,0,0.709522128141196,0.211107635297664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.47748896947538,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0898683511473268,1.07412704805365,0,0.197286811273867,0,2.22273980289274,0,0,0,0,0,0,0,0.254253650292766,0,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0,0,0,0,0,0.638002319463839,0,0,0,0.156980256395025,0,0,0,0,0,0,1.05499032264014,0.326465616318295,0,0,0,0,0,0,0,0,0,0,0,0,0,0.728341138602278,0,0,0,0,0,0,0,0.330991955875499,0.941798755221676,0,0,0.416024019039416,0,0,0,0,0.51595809741485,0.677294319023596,0,0.410577285266046,0,0,0,0,0.19871461170299,0,0,0,0,0,0.144090417154106,0,0,0.288109595976299,0,0,0,0.104602846312333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.105600336519406,0.179287339332845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171086837884329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124980407962107,0,0,1.6468607378872,0,0,0,0,0,0,0.50313580350515,1.77962244319307,0,0.151230923763239,0,0.295710299979268,0,0,0,0,0.265841714557995,0,0,0,0,0,0,0,0.398095888698616,0,0,0,0,0,1.71553273099941,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327609848846413,0.491545817507439,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11796972334774,0,0,0.381382095467167,0,0,0,0,0,0,0.163771917510097,0,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0,0,1.02892805662451,0,0,0.354581522651905,0.222462803784138,0,0,0.280272163313789,0,0,0.9555033757741,0,0,0,0,0,0,0,0,0,0,0.0852134047591577,0,0,0,0,0,0.098150233615243,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0644578879735772,0,0,0,0.641930933513346,0,0.458729283404541,0.143339583151451,0,0,0,0,0.371995018166751,0.924351257262837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.533636729388577,1.9307228228694,0,0,0,0,0,0,0 | |||
|short_description=p@chr3:149086808..149086812,+ | |||
}} |
Revision as of 22:03, 12 September 2013
Short description: | p@chr3:149086808..149086812, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr3:149086808..149086812, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the coronary artery | 9.30e-15 | 3 |
meningothelial cell | 5.62e-12 | 1 |
fibroblast of pulmonary artery | 1.07e-11 | 1 |
smooth muscle cell of the subclavian artery | 1.76e-09 | 5 |
Ontology term | p-value | n |
---|---|---|
heart blood vessel | 3.38e-19 | 5 |
coronary vessel | 3.38e-19 | 5 |
coronary artery | 9.30e-15 | 3 |
stroma of bone marrow | 3.27e-12 | 1 |
thoracic segment blood vessel | 1.76e-09 | 5 |
subclavian artery | 1.76e-09 | 5 |
heart | 4.18e-07 | 24 |
primitive heart tube | 4.18e-07 | 24 |
primary heart field | 4.18e-07 | 24 |
anterior lateral plate mesoderm | 4.18e-07 | 24 |
heart tube | 4.18e-07 | 24 |
heart primordium | 4.18e-07 | 24 |
cardiac mesoderm | 4.18e-07 | 24 |
cardiogenic plate | 4.18e-07 | 24 |
heart rudiment | 4.18e-07 | 24 |
trunk blood vessel | 5.19e-07 | 7 |
vessel | 5.95e-07 | 68 |
Ontology term | p-value | n |
---|---|---|
central nervous system cancer | 5.62e-12 | 1 |
meningioma | 5.62e-12 | 1 |
pleomorphic carcinoma | 1.63e-11 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.