FFCP PHASE1:Mm9::chr13:19284059..19284066,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=|HGNC=|MCL_coexpression_id=51|UniProt=|association_with_transcript=-235bp_to_ENSMUST00000103556_5end|description=CAGE_peak_2_at_ENSMUST00000103556_5end|id=chr13:19284059..19284066,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004177!3.43e-13!29;UBERON:0000014!5.17e-11!5;UBERON:0001003!5.17e-11!5;UBERON:0002097!5.17e-11!5;UBERON:0002199!5.17e-11!5;UBERON:0007029!5.17e-11!5;UBERON:0007376!5.17e-11!5;UBERON:0002416!5.17e-11!5;UBERON:0007383!5.17e-11!5;UBERON:0002370!4.45e-09!23;UBERON:0000974!4.45e-09!23;UBERON:0004807!4.45e-09!23;UBERON:0005058!4.45e-09!23;UBERON:0003351!4.45e-09!23;UBERON:0009113!4.45e-09!23;UBERON:0003295!4.45e-09!23;UBERON:0009722!4.45e-09!23;UBERON:0005562!4.45e-09!23;UBERON:0007690!4.45e-09!23;UBERON:0002193!8.95e-09!48;UBERON:0006562!1.34e-08!24;UBERON:0003408!1.34e-08!24;UBERON:0001557!1.34e-08!24;UBERON:0001042!1.34e-08!24;UBERON:0008814!1.34e-08!24;UBERON:0009145!1.34e-08!24;UBERON:0002390!2.44e-08!45;UBERON:0003061!2.44e-08!45;UBERON:0000072!2.22e-07!27;UBERON:0000065!6.62e-07!41|ontology_enrichment_uberon_v019_2=UBERON:0002370,7.48e-13,23;UBERON:0000974,7.48e-13,23;UBERON:0004807,7.48e-13,23;UBERON:0005058,7.48e-13,23;UBERON:0003351,7.48e-13,23;UBERON:0009113,7.48e-13,23;UBERON:0003295,7.48e-13,23;UBERON:0009722,7.48e-13,23;UBERON:0005562,7.48e-13,23;UBERON:0007690,7.48e-13,23;UBERON:0006562,2.40e-12,24;UBERON:0003408,2.40e-12,24;UBERON:0001557,2.40e-12,24;UBERON:0001042,2.40e-12,24;UBERON:0008814,2.40e-12,24;UBERON:0009145,2.40e-12,24;UBERON:0000072,4.75e-11,27;UBERON:0004177,2.47e-10,29;UBERON:0005057,2.47e-10,29;UBERON:0000077,1.14e-08,35;UBERON:0007811,1.91e-08,36;UBERON:0000065,1.74e-07,41;UBERON:0001004,2.54e-07,42;UBERON:0000153,3.65e-07,43;UBERON:0002390,7.19e-07,45;UBERON:0003061,7.19e-07,45|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157731082679119,0,0,0,0.0992909512008853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258937883647172,0,0,0,0,0.150722640552623,0,0,0,0.289198713839823,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150704817835715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330418782983798,0,0,0,0,0.201683524623343,0,0,0,0,0,0.198956472041151,0,0,0,0.199141273254367,0,0.114248512609729,0,0,0,0,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221464689648775,0,0.163863314715738,0,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.295301892880773,0.307435147943927,0,0.363533729477506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.6488625294148,0.322928853391811,0.0603129249281559,0.596861720015682,0.492422699235184,0,0,0,0.206386867963223,0.370389054739423,0.188368457004691,0,0.228778173206523,0,0,0,0,0,0,0,0,0.436725127492355,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.608175645870493,1.84879722896689,4.15746633528944,2.50637373934474,2.98022032171897,0.120195449519969,0.147689527174577,0.302899349844443,0.15241361331,0.201652370273681,0,0.0962118416403295,0,0,0,0,0,0,0,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0936415074698824,0,0,0,0,0,0,0,0,0,0,0,0,0.0846146078916765,0,0,0,0,0,0,0,0,0.192906610981141,0.249810577937946,0,0,0,0.220591419119515,0|short_description=p2@ENSMUST00000103556}} | ||
|EntrezGene= | |||
|HGNC= | |||
|MCL_coexpression_id=51 | |||
|UniProt= | |||
|association_with_transcript=-235bp_to_ENSMUST00000103556_5end | |||
|description=CAGE_peak_2_at_ENSMUST00000103556_5end | |||
|id=chr13:19284059..19284066,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004177!3.43e-13!29;UBERON:0000014!5.17e-11!5;UBERON:0001003!5.17e-11!5;UBERON:0002097!5.17e-11!5;UBERON:0002199!5.17e-11!5;UBERON:0007029!5.17e-11!5;UBERON:0007376!5.17e-11!5;UBERON:0002416!5.17e-11!5;UBERON:0007383!5.17e-11!5;UBERON:0002370!4.45e-09!23;UBERON:0000974!4.45e-09!23;UBERON:0004807!4.45e-09!23;UBERON:0005058!4.45e-09!23;UBERON:0003351!4.45e-09!23;UBERON:0009113!4.45e-09!23;UBERON:0003295!4.45e-09!23;UBERON:0009722!4.45e-09!23;UBERON:0005562!4.45e-09!23;UBERON:0007690!4.45e-09!23;UBERON:0002193!8.95e-09!48;UBERON:0006562!1.34e-08!24;UBERON:0003408!1.34e-08!24;UBERON:0001557!1.34e-08!24;UBERON:0001042!1.34e-08!24;UBERON:0008814!1.34e-08!24;UBERON:0009145!1.34e-08!24;UBERON:0002390!2.44e-08!45;UBERON:0003061!2.44e-08!45;UBERON:0000072!2.22e-07!27;UBERON:0000065!6.62e-07!41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,7.48e-13,23;UBERON:0000974,7.48e-13,23;UBERON:0004807,7.48e-13,23;UBERON:0005058,7.48e-13,23;UBERON:0003351,7.48e-13,23;UBERON:0009113,7.48e-13,23;UBERON:0003295,7.48e-13,23;UBERON:0009722,7.48e-13,23;UBERON:0005562,7.48e-13,23;UBERON:0007690,7.48e-13,23;UBERON:0006562,2.40e-12,24;UBERON:0003408,2.40e-12,24;UBERON:0001557,2.40e-12,24;UBERON:0001042,2.40e-12,24;UBERON:0008814,2.40e-12,24;UBERON:0009145,2.40e-12,24;UBERON:0000072,4.75e-11,27;UBERON:0004177,2.47e-10,29;UBERON:0005057,2.47e-10,29;UBERON:0000077,1.14e-08,35;UBERON:0007811,1.91e-08,36;UBERON:0000065,1.74e-07,41;UBERON:0001004,2.54e-07,42;UBERON:0000153,3.65e-07,43;UBERON:0002390,7.19e-07,45;UBERON:0003061,7.19e-07,45 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157731082679119,0,0,0,0.0992909512008853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258937883647172,0,0,0,0,0.150722640552623,0,0,0,0.289198713839823,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150704817835715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330418782983798,0,0,0,0,0.201683524623343,0,0,0,0,0,0.198956472041151,0,0,0,0.199141273254367,0,0.114248512609729,0,0,0,0,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221464689648775,0,0.163863314715738,0,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.295301892880773,0.307435147943927,0,0.363533729477506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.6488625294148,0.322928853391811,0.0603129249281559,0.596861720015682,0.492422699235184,0,0,0,0.206386867963223,0.370389054739423,0.188368457004691,0,0.228778173206523,0,0,0,0,0,0,0,0,0.436725127492355,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.608175645870493,1.84879722896689,4.15746633528944,2.50637373934474,2.98022032171897,0.120195449519969,0.147689527174577,0.302899349844443,0.15241361331,0.201652370273681,0,0.0962118416403295,0,0,0,0,0,0,0,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0936415074698824,0,0,0,0,0,0,0,0,0,0,0,0,0.0846146078916765,0,0,0,0,0,0,0,0,0.192906610981141,0.249810577937946,0,0,0,0.220591419119515,0 | |||
|short_description=p2@ENSMUST00000103556 | |||
}} |
Revision as of 00:05, 13 September 2013
Short description: | p2@ENSMUST00000103556 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_ENSMUST00000103556_5end |
Coexpression cluster: | MCL_coexpression_mm9:51 |
Association with transcript: | -235bp_to_ENSMUST00000103556_5end |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
thymus | 7.48e-13 | 23 |
neck | 7.48e-13 | 23 |
respiratory system epithelium | 7.48e-13 | 23 |
hemolymphoid system gland | 7.48e-13 | 23 |
pharyngeal epithelium | 7.48e-13 | 23 |
thymic region | 7.48e-13 | 23 |
pharyngeal gland | 7.48e-13 | 23 |
entire pharyngeal arch endoderm | 7.48e-13 | 23 |
thymus primordium | 7.48e-13 | 23 |
early pharyngeal endoderm | 7.48e-13 | 23 |
pharynx | 2.40e-12 | 24 |
gland of gut | 2.40e-12 | 24 |
upper respiratory tract | 2.40e-12 | 24 |
chordate pharynx | 2.40e-12 | 24 |
pharyngeal arch system | 2.40e-12 | 24 |
pharyngeal region of foregut | 2.40e-12 | 24 |
segment of respiratory tract | 4.75e-11 | 27 |
hemopoietic organ | 2.47e-10 | 29 |
immune organ | 2.47e-10 | 29 |
mixed endoderm/mesoderm-derived structure | 1.14e-08 | 35 |
craniocervical region | 1.91e-08 | 36 |
respiratory tract | 1.74e-07 | 41 |
respiratory system | 2.54e-07 | 42 |
anterior region of body | 3.65e-07 | 43 |
hematopoietic system | 7.19e-07 | 45 |
blood island | 7.19e-07 | 45 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.