FFCP PHASE1:Mm9::chr13:28927958..28927963,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=1112|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr13:28927958..28927963,-|id=chr13:28927958..28927963,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000107,8.92e-07,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0000153,2.55e-09,43;UBERON:0000065,1.87e-07,41;UBERON:0001004,3.44e-07,42;UBERON:0002370,3.50e-07,23;UBERON:0000974,3.50e-07,23;UBERON:0004807,3.50e-07,23;UBERON:0005058,3.50e-07,23;UBERON:0003351,3.50e-07,23;UBERON:0009113,3.50e-07,23;UBERON:0003295,3.50e-07,23;UBERON:0009722,3.50e-07,23;UBERON:0005562,3.50e-07,23;UBERON:0007690,3.50e-07,23;UBERON:0006562,8.68e-07,24;UBERON:0003408,8.68e-07,24;UBERON:0001557,8.68e-07,24;UBERON:0001042,8.68e-07,24;UBERON:0008814,8.68e-07,24;UBERON:0009145,8.68e-07,24;UBERON:0002410,8.92e-07,9|phase1_expression=0.160148847104794,0,0,0,0,0,0,0.129123323441576,0,0,0,0.0797721589953364,0,0,0,0.202475267389826,0,0,0,0,0.935476191661768,0.794327609607082,1.30599894569468,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.304130793658544,0.550640256485045,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.311068836925433,0,0,0,0.220868540951614,0,0.0958454710182364,0,0,0,0,0,0.0914876436024097,0,0,0.56276261003168,0,0,0.142371680799103,0.186399445825301,0.302904773332736,0.0755715601067855,1.15945795480671,0,0,0,0,0,0.280888840263504,0,0,0,0.281686839553361,0,0,0,0.432982082022428,0.253359865475099,0.505524445014783,0,0,0,0.520455980298408,0.304465478312141,0.230615497256059,0,0.23517741427141,0,0,0.144599356919912,0,0.485300549842228,0.220841518460394,1.93950101254089,0,0,0,0,1.31796636956512,0,0.127070227073065,0,0,0.628271760564322,0,0,0,0,0.305518091550949,0.248813941220186,0.252722758433675,0,1.30120442962704,0,0.720248519221397,0.60281927134286,1.2246569847239,2.3060469651273,0.655912071918102,0,0.862271971731369,1.51284864134255,1.58356011747554,0.876782929710299,1.94633074457919,0,1.4404749548556,0.199034266818493,0.702213187313235,0,0,0.207125772535502,0.703578179943289,0.540186184383045,0.473489471170421,0.590292695242212,0,0.697601834251224,0,0.233530684734339,0.658239399653922,1.31333971263276,0.243206428637567,0.438599962275997,0.439100230582101,0.134206418760372,0.210289948564127,0.411618449517138,0,0,0.853153002140936,1.39342003116263,0.515469845288373,0.80673409849337,0.22237804384487,0.190225626112559,0,0.164698954724011,0.251335208800269,0,0.19496408711912,0,0.216138049874694,0,0,1.37098215131675,0,0.203651327845314,0.387904974335251,1.05203729835478,0.758838445491087,0.147610147979602,0,0,0,0,0.393117990226406,0,0,0.241177159752417,0,0,0,0,2.87536413054709,0.372140947668503,0,0,0,0.482443521363367,0.554259570499814,0,0,0.339490171550376,1.40814148973101,0.335012514883631,0.238043640886014,0.390267295715598,1.89162172927429,2.21464689648775,1.43509291791738,0.983179888294428,0.518054945597687,1.01254341007058,0,0,0.983528546038072,0.275936746304732,0,0,0,1.51482556322624,1.26203287766503,1.56175497718655,1.50796378412959,0.238968797952552,0.668396022247182,1.13230612315533,2.02405350837447,1.75353514746787,0.790575555893047,0,0.283880170416537,0,0.488660878060728,1.15479086080775,1.32745138339963,0.971122544619926,0.302323556964751,0.377210159511796,0,0.307435147943927,0,1.09060118843252,0,0,0,0,0.680879211507576,1.44048875225048,0.258717367565509,0.643011105094777,0.354680467284547,0.535106452806212,0.329098041204242,0,0.23467170806371,0.21183207086382,0.220528398054962,0.65954501176592,0.807322133479528,1.26657142349127,0.716234064018819,1.47726809770555,0,0.556275906031529,0,0.206386867963223,0.185194527369712,0.188368457004691,0.136694227721025,0,1.5298058699447,0.139951452323658,0.414599921413271,0,0.632671987162271,0.406638934253697,0.216010681643603,0,0,0.674321731924103,0.330613822901344,0,0,0.621339313086926,0.56369293868419,0.598066184175915,0.165458490457098,0.388902376688095,0.516639293910924,0.675824501963113,0.469428954583016,0.5208175393758,0.314578033277133,0.483168241652012,0.576060012515731,2.8441000856536,0,1.02710957164827,0.649604114888975,0.537080087002444,0.993406773906324,3.24527713703916,3.83992770653901,4.54349024766664,3.27689268616499,5.04130925684203,5.26272555994663,3.07877893249054,3.62318396762864,0.226730383615211,0,0,0,0.579568782096571,0.563047426353546,0.549454872801795,0.643105137237198,0,0,0,0,0,0,0,0,0,0,0,0.207574695168353,1.19707462020309,1.36586884603307,0.486213434136588,0,0,0.44449345560323,0.206035057238894,0,0.252697211763798,1.2673964994512,0.943131706930381,0.280924522409647,0.640251524048693,0.516919220600519,0,0.695305955669133,0.38581844092741,0,0.294397840268795,0.685738504770831,0.70990322463735,0.715308569841963,1.45346416632329,0.564656282491984,0.507687647350059,0.365855945745545,1.31534855718921,0.814824683075171,1.12228454331548,0.474540072496697,0.492522411877817,0.818462086339379,0.309873682371932,0,0.249810577937946,0.701794825336225,0.214871054048298,0.191288332068843,0.882365676478062,0.231867835620421|short_description=p@chr13:28927958..28927963,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=1112 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr13:28927958..28927963,- | |||
|id=chr13:28927958..28927963,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000107,8.92e-07,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000153,2.55e-09,43;UBERON:0000065,1.87e-07,41;UBERON:0001004,3.44e-07,42;UBERON:0002370,3.50e-07,23;UBERON:0000974,3.50e-07,23;UBERON:0004807,3.50e-07,23;UBERON:0005058,3.50e-07,23;UBERON:0003351,3.50e-07,23;UBERON:0009113,3.50e-07,23;UBERON:0003295,3.50e-07,23;UBERON:0009722,3.50e-07,23;UBERON:0005562,3.50e-07,23;UBERON:0007690,3.50e-07,23;UBERON:0006562,8.68e-07,24;UBERON:0003408,8.68e-07,24;UBERON:0001557,8.68e-07,24;UBERON:0001042,8.68e-07,24;UBERON:0008814,8.68e-07,24;UBERON:0009145,8.68e-07,24;UBERON:0002410,8.92e-07,9 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0.129123323441576,0,0,0,0.0797721589953364,0,0,0,0.202475267389826,0,0,0,0,0.935476191661768,0.794327609607082,1.30599894569468,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.304130793658544,0.550640256485045,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.311068836925433,0,0,0,0.220868540951614,0,0.0958454710182364,0,0,0,0,0,0.0914876436024097,0,0,0.56276261003168,0,0,0.142371680799103,0.186399445825301,0.302904773332736,0.0755715601067855,1.15945795480671,0,0,0,0,0,0.280888840263504,0,0,0,0.281686839553361,0,0,0,0.432982082022428,0.253359865475099,0.505524445014783,0,0,0,0.520455980298408,0.304465478312141,0.230615497256059,0,0.23517741427141,0,0,0.144599356919912,0,0.485300549842228,0.220841518460394,1.93950101254089,0,0,0,0,1.31796636956512,0,0.127070227073065,0,0,0.628271760564322,0,0,0,0,0.305518091550949,0.248813941220186,0.252722758433675,0,1.30120442962704,0,0.720248519221397,0.60281927134286,1.2246569847239,2.3060469651273,0.655912071918102,0,0.862271971731369,1.51284864134255,1.58356011747554,0.876782929710299,1.94633074457919,0,1.4404749548556,0.199034266818493,0.702213187313235,0,0,0.207125772535502,0.703578179943289,0.540186184383045,0.473489471170421,0.590292695242212,0,0.697601834251224,0,0.233530684734339,0.658239399653922,1.31333971263276,0.243206428637567,0.438599962275997,0.439100230582101,0.134206418760372,0.210289948564127,0.411618449517138,0,0,0.853153002140936,1.39342003116263,0.515469845288373,0.80673409849337,0.22237804384487,0.190225626112559,0,0.164698954724011,0.251335208800269,0,0.19496408711912,0,0.216138049874694,0,0,1.37098215131675,0,0.203651327845314,0.387904974335251,1.05203729835478,0.758838445491087,0.147610147979602,0,0,0,0,0.393117990226406,0,0,0.241177159752417,0,0,0,0,2.87536413054709,0.372140947668503,0,0,0,0.482443521363367,0.554259570499814,0,0,0.339490171550376,1.40814148973101,0.335012514883631,0.238043640886014,0.390267295715598,1.89162172927429,2.21464689648775,1.43509291791738,0.983179888294428,0.518054945597687,1.01254341007058,0,0,0.983528546038072,0.275936746304732,0,0,0,1.51482556322624,1.26203287766503,1.56175497718655,1.50796378412959,0.238968797952552,0.668396022247182,1.13230612315533,2.02405350837447,1.75353514746787,0.790575555893047,0,0.283880170416537,0,0.488660878060728,1.15479086080775,1.32745138339963,0.971122544619926,0.302323556964751,0.377210159511796,0,0.307435147943927,0,1.09060118843252,0,0,0,0,0.680879211507576,1.44048875225048,0.258717367565509,0.643011105094777,0.354680467284547,0.535106452806212,0.329098041204242,0,0.23467170806371,0.21183207086382,0.220528398054962,0.65954501176592,0.807322133479528,1.26657142349127,0.716234064018819,1.47726809770555,0,0.556275906031529,0,0.206386867963223,0.185194527369712,0.188368457004691,0.136694227721025,0,1.5298058699447,0.139951452323658,0.414599921413271,0,0.632671987162271,0.406638934253697,0.216010681643603,0,0,0.674321731924103,0.330613822901344,0,0,0.621339313086926,0.56369293868419,0.598066184175915,0.165458490457098,0.388902376688095,0.516639293910924,0.675824501963113,0.469428954583016,0.5208175393758,0.314578033277133,0.483168241652012,0.576060012515731,2.8441000856536,0,1.02710957164827,0.649604114888975,0.537080087002444,0.993406773906324,3.24527713703916,3.83992770653901,4.54349024766664,3.27689268616499,5.04130925684203,5.26272555994663,3.07877893249054,3.62318396762864,0.226730383615211,0,0,0,0.579568782096571,0.563047426353546,0.549454872801795,0.643105137237198,0,0,0,0,0,0,0,0,0,0,0,0.207574695168353,1.19707462020309,1.36586884603307,0.486213434136588,0,0,0.44449345560323,0.206035057238894,0,0.252697211763798,1.2673964994512,0.943131706930381,0.280924522409647,0.640251524048693,0.516919220600519,0,0.695305955669133,0.38581844092741,0,0.294397840268795,0.685738504770831,0.70990322463735,0.715308569841963,1.45346416632329,0.564656282491984,0.507687647350059,0.365855945745545,1.31534855718921,0.814824683075171,1.12228454331548,0.474540072496697,0.492522411877817,0.818462086339379,0.309873682371932,0,0.249810577937946,0.701794825336225,0.214871054048298,0.191288332068843,0.882365676478062,0.231867835620421 | |||
|short_description=p@chr13:28927958..28927963,- | |||
}} |
Revision as of 00:17, 13 September 2013
Short description: | p@chr13:28927958..28927963, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr13:28927958..28927963, - |
Coexpression cluster: | MCL_coexpression_mm9:1112 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
autonomic neuron | 8.92e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
anterior region of body | 2.55e-09 | 43 |
respiratory tract | 1.87e-07 | 41 |
respiratory system | 3.44e-07 | 42 |
thymus | 3.50e-07 | 23 |
neck | 3.50e-07 | 23 |
respiratory system epithelium | 3.50e-07 | 23 |
hemolymphoid system gland | 3.50e-07 | 23 |
pharyngeal epithelium | 3.50e-07 | 23 |
thymic region | 3.50e-07 | 23 |
pharyngeal gland | 3.50e-07 | 23 |
entire pharyngeal arch endoderm | 3.50e-07 | 23 |
thymus primordium | 3.50e-07 | 23 |
early pharyngeal endoderm | 3.50e-07 | 23 |
pharynx | 8.68e-07 | 24 |
gland of gut | 8.68e-07 | 24 |
upper respiratory tract | 8.68e-07 | 24 |
chordate pharynx | 8.68e-07 | 24 |
pharyngeal arch system | 8.68e-07 | 24 |
pharyngeal region of foregut | 8.68e-07 | 24 |
autonomic nervous system | 8.92e-07 | 9 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.