FFCP PHASE1:Hg19::chr3:48514877..48514922,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=51246|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=30376|TSSclassifier=S|UniProt=|association_with_transcript=18bp_to_ENST00000465449,uc011bbk.1_5end|coexpression_cluster_id=C304|description=CAGE_peak_8_at_SHISA5_5end|id=chr3:48514877..48514922,-|ontology_enrichment_celltype=CL:0000039!1.48e-08!7;CL:0000586!1.48e-08!7|ontology_enrichment_celltype_v019=CL:0000039;4.15e-24;7!CL:0000586;4.15e-24;7!CL:0000182;1.07e-19;12|ontology_enrichment_celltype_v019_2=CL:0000039,3.74e-24,7;CL:0000586,3.74e-24,7;CL:0000182,1.09e-19,12;CL:0000223,1.09e-09,58|ontology_enrichment_development_v019=UBERON:0004161;2.59e-21;11!UBERON:0009497;8.18e-18;13!UBERON:0003104;7.83e-17;31!UBERON:0001041;5.28e-07;30|ontology_enrichment_disease=DOID:305!1.94e-10!106;DOID:0050687!8.50e-10!143|ontology_enrichment_disease_v019=DOID:3095;5.18e-07;22!DOID:2994;5.18e-07;22|ontology_enrichment_disease_v019_2=DOID:0050687,4.31e-07,143;DOID:3095,5.02e-07,22;DOID:2994,5.02e-07,22;DOID:305,5.33e-07,106|ontology_enrichment_uberon=UBERON:0009856!9.55e-12!26;UBERON:0009497!3.60e-11!25;UBERON:0000015!3.60e-11!25;UBERON:0002423!3.60e-11!25;UBERON:0006235!3.60e-11!25;UBERON:0004161!3.60e-11!25;UBERON:0007499!4.64e-11!25;UBERON:0009854!4.98e-11!23;UBERON:0008835!2.45e-10!22;UBERON:0003894!2.45e-10!22;UBERON:0005409!3.72e-10!35;UBERON:0005172!9.64e-09!55;UBERON:0005173!9.64e-09!55;UBERON:0000160!1.58e-08!27;UBERON:0002107!1.93e-08!19;UBERON:0006925!1.93e-08!19;UBERON:0008836!1.93e-08!19;UBERON:0002417!2.46e-08!61;UBERON:0000916!2.46e-08!61;UBERON:0004921!3.23e-08!129;UBERON:0004185!3.23e-08!129;UBERON:0001007!4.66e-07!155;UBERON:0001555!4.66e-07!155;UBERON:0007026!4.66e-07!155;UBERON:0005177!5.34e-07!107|ontology_enrichment_uberon_v019=UBERON:0005409;7.38e-21;22!UBERON:0000160;5.43e-19;17!UBERON:0002107;8.92e-19;19!UBERON:0006925;8.92e-19;19!UBERON:0002423;1.73e-16;25!UBERON:0004921;8.29e-12;33!UBERON:0000059;2.06e-11;11!UBERON:0000473;8.36e-11;8!UBERON:0002365;1.88e-10;31!UBERON:0002330;1.88e-10;31!UBERON:0000949;1.62e-09;43!UBERON:0002368;4.36e-09;33!UBERON:0001052;9.32e-09;4!UBERON:0000922;1.92e-08;49!UBERON:0001007;2.61e-08;81!UBERON:0003135;8.85e-08;11!UBERON:0002108;1.16e-07;4!UBERON:0005172;3.38e-07;52!UBERON:0005173;3.38e-07;52!UBERON:0004907;4.39e-07;5!UBERON:0001155;9.93e-07;9|ontology_enrichment_uberon_v019_2=UBERON:0000160,4.05e-19,17;UBERON:0002107,9.20e-19,19;UBERON:0006925,9.20e-19,19;UBERON:0008836,9.20e-19,19;UBERON:0005409,3.19e-18,25;UBERON:0009497,1.61e-16,25;UBERON:0000015,1.61e-16,25;UBERON:0002423,1.61e-16,25;UBERON:0006235,1.61e-16,25;UBERON:0004161,1.61e-16,25;UBERON:0008835,6.56e-16,22;UBERON:0003894,6.56e-16,22;UBERON:0009854,4.00e-15,23;UBERON:0007499,9.63e-14,25;UBERON:0009856,3.93e-13,26;UBERON:0004921,2.12e-12,118;UBERON:0000059,1.60e-11,11;UBERON:0000949,2.22e-11,45;UBERON:0000473,8.29e-11,8;UBERON:0003929,8.67e-11,54;UBERON:0002365,1.13e-10,31;UBERON:0002330,1.13e-10,31;UBERON:0005172,1.67e-10,54;UBERON:0005173,1.67e-10,54;UBERON:0001007,5.40e-10,145;UBERON:0001555,5.40e-10,145;UBERON:0007026,5.40e-10,145;UBERON:0004119,2.27e-09,160;UBERON:0000925,2.27e-09,160;UBERON:0006595,2.27e-09,160;UBERON:0002368,3.22e-09,35;UBERON:0002417,3.88e-09,60;UBERON:0000916,3.88e-09,60;UBERON:0001052,8.15e-09,4;UBERON:0003135,8.79e-08,11;UBERON:0002108,1.12e-07,4;UBERON:0005177,1.33e-07,101;UBERON:0004907,3.95e-07,5;UBERON:0005911,4.63e-07,82;UBERON:0001155,8.66e-07,9|phase1_expression=0,0,0,0,0.446961094427288,0,0,0,0.261185628199839,0.491467873003018,0,0.218441372130172,0,0,0,0,0,0,0,0,0.204000691244253,0,0,0.136874425072884,0,0.993374274723366,1.06730766284929,1.10195093839151,0,0,0,0,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251248665256743,0,0,0,0,0,0,0.212604299965044,0,0,0,0,0,0,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0.382273228125229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0.221729397462564,0,1.30979075497713,0,0,0,0,0,0,0,0,0.198762407366705,0,0,0,0,0,0.208994966536811,0,0.35576626268671,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163461903113459,0.151357427644931,0,0,0,0.570471821544449,0,0,0,0,0.204154171254893,0,0,0,0,0,0,0,0,0,0,0.30648779579902,0,0,0,0,0,0,0.103052529238439,0,0,0,0,0,0,0,0,0,0.169560592310488,0,0,0,0.609868530647977,0.662648841607426,1.97529702878181,0.518305275076852,2.52320850875628,0.72995471815166,0,0,0,0,0.721879481669586,0,0,0,0.110293972732394,0,0,0.134831308160164,0,0,0,0,0.4115740113314,0,15.2106041786197,12.7767538168091,11.8157981336281,0,14.3896473095443,0.171567810298526,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0.179117045405697,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0,0,0,0.112131084345361,0.43596006883328,0,0,0,0,0,0,0,0,0.532844358032199,0,0,0.823240336780769,0.325736184293735,0.355391948742546,0,0,0,0.099972991182057,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=51246 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30376 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=18bp_to_ENST00000465449,uc011bbk.1_5end | |||
|coexpression_cluster_id=C304 | |||
|description=CAGE_peak_8_at_SHISA5_5end | |||
|id=chr3:48514877..48514922,- | |||
|ontology_enrichment_celltype=CL:0000039!1.48e-08!7;CL:0000586!1.48e-08!7 | |||
|ontology_enrichment_celltype_v019=CL:0000039;4.15e-24;7!CL:0000586;4.15e-24;7!CL:0000182;1.07e-19;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,3.74e-24,7;CL:0000586,3.74e-24,7;CL:0000182,1.09e-19,12;CL:0000223,1.09e-09,58 | |||
|ontology_enrichment_development_v019=UBERON:0004161;2.59e-21;11!UBERON:0009497;8.18e-18;13!UBERON:0003104;7.83e-17;31!UBERON:0001041;5.28e-07;30 | |||
|ontology_enrichment_disease=DOID:305!1.94e-10!106;DOID:0050687!8.50e-10!143 | |||
|ontology_enrichment_disease_v019=DOID:3095;5.18e-07;22!DOID:2994;5.18e-07;22 | |||
|ontology_enrichment_disease_v019_2=DOID:0050687,4.31e-07,143;DOID:3095,5.02e-07,22;DOID:2994,5.02e-07,22;DOID:305,5.33e-07,106 | |||
|ontology_enrichment_uberon=UBERON:0009856!9.55e-12!26;UBERON:0009497!3.60e-11!25;UBERON:0000015!3.60e-11!25;UBERON:0002423!3.60e-11!25;UBERON:0006235!3.60e-11!25;UBERON:0004161!3.60e-11!25;UBERON:0007499!4.64e-11!25;UBERON:0009854!4.98e-11!23;UBERON:0008835!2.45e-10!22;UBERON:0003894!2.45e-10!22;UBERON:0005409!3.72e-10!35;UBERON:0005172!9.64e-09!55;UBERON:0005173!9.64e-09!55;UBERON:0000160!1.58e-08!27;UBERON:0002107!1.93e-08!19;UBERON:0006925!1.93e-08!19;UBERON:0008836!1.93e-08!19;UBERON:0002417!2.46e-08!61;UBERON:0000916!2.46e-08!61;UBERON:0004921!3.23e-08!129;UBERON:0004185!3.23e-08!129;UBERON:0001007!4.66e-07!155;UBERON:0001555!4.66e-07!155;UBERON:0007026!4.66e-07!155;UBERON:0005177!5.34e-07!107 | |||
|ontology_enrichment_uberon_v019=UBERON:0005409;7.38e-21;22!UBERON:0000160;5.43e-19;17!UBERON:0002107;8.92e-19;19!UBERON:0006925;8.92e-19;19!UBERON:0002423;1.73e-16;25!UBERON:0004921;8.29e-12;33!UBERON:0000059;2.06e-11;11!UBERON:0000473;8.36e-11;8!UBERON:0002365;1.88e-10;31!UBERON:0002330;1.88e-10;31!UBERON:0000949;1.62e-09;43!UBERON:0002368;4.36e-09;33!UBERON:0001052;9.32e-09;4!UBERON:0000922;1.92e-08;49!UBERON:0001007;2.61e-08;81!UBERON:0003135;8.85e-08;11!UBERON:0002108;1.16e-07;4!UBERON:0005172;3.38e-07;52!UBERON:0005173;3.38e-07;52!UBERON:0004907;4.39e-07;5!UBERON:0001155;9.93e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,4.05e-19,17;UBERON:0002107,9.20e-19,19;UBERON:0006925,9.20e-19,19;UBERON:0008836,9.20e-19,19;UBERON:0005409,3.19e-18,25;UBERON:0009497,1.61e-16,25;UBERON:0000015,1.61e-16,25;UBERON:0002423,1.61e-16,25;UBERON:0006235,1.61e-16,25;UBERON:0004161,1.61e-16,25;UBERON:0008835,6.56e-16,22;UBERON:0003894,6.56e-16,22;UBERON:0009854,4.00e-15,23;UBERON:0007499,9.63e-14,25;UBERON:0009856,3.93e-13,26;UBERON:0004921,2.12e-12,118;UBERON:0000059,1.60e-11,11;UBERON:0000949,2.22e-11,45;UBERON:0000473,8.29e-11,8;UBERON:0003929,8.67e-11,54;UBERON:0002365,1.13e-10,31;UBERON:0002330,1.13e-10,31;UBERON:0005172,1.67e-10,54;UBERON:0005173,1.67e-10,54;UBERON:0001007,5.40e-10,145;UBERON:0001555,5.40e-10,145;UBERON:0007026,5.40e-10,145;UBERON:0004119,2.27e-09,160;UBERON:0000925,2.27e-09,160;UBERON:0006595,2.27e-09,160;UBERON:0002368,3.22e-09,35;UBERON:0002417,3.88e-09,60;UBERON:0000916,3.88e-09,60;UBERON:0001052,8.15e-09,4;UBERON:0003135,8.79e-08,11;UBERON:0002108,1.12e-07,4;UBERON:0005177,1.33e-07,101;UBERON:0004907,3.95e-07,5;UBERON:0005911,4.63e-07,82;UBERON:0001155,8.66e-07,9 | |||
|phase1_expression=0,0,0,0,0.446961094427288,0,0,0,0.261185628199839,0.491467873003018,0,0.218441372130172,0,0,0,0,0,0,0,0,0.204000691244253,0,0,0.136874425072884,0,0.993374274723366,1.06730766284929,1.10195093839151,0,0,0,0,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251248665256743,0,0,0,0,0,0,0.212604299965044,0,0,0,0,0,0,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0.382273228125229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0.221729397462564,0,1.30979075497713,0,0,0,0,0,0,0,0,0.198762407366705,0,0,0,0,0,0.208994966536811,0,0.35576626268671,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163461903113459,0.151357427644931,0,0,0,0.570471821544449,0,0,0,0,0.204154171254893,0,0,0,0,0,0,0,0,0,0,0.30648779579902,0,0,0,0,0,0,0.103052529238439,0,0,0,0,0,0,0,0,0,0.169560592310488,0,0,0,0.609868530647977,0.662648841607426,1.97529702878181,0.518305275076852,2.52320850875628,0.72995471815166,0,0,0,0,0.721879481669586,0,0,0,0.110293972732394,0,0,0.134831308160164,0,0,0,0,0.4115740113314,0,15.2106041786197,12.7767538168091,11.8157981336281,0,14.3896473095443,0.171567810298526,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0.179117045405697,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0,0,0,0.112131084345361,0.43596006883328,0,0,0,0,0,0,0,0,0.532844358032199,0,0,0.823240336780769,0.325736184293735,0.355391948742546,0,0,0,0.099972991182057,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343143423810856,0,0,0,0,0,0,0.496215615637554,0,0.280660094433074,0,0,0.160853921143607,0,0,0.177561725313127,0.0821271560138091,0,0,10.1521937656963,0.200506470303285,0,0,0,0,0,0.15403067420883,0.784349769176855,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.32772248920434,0.0915694648183434,0,0,0,1.6068392984416,0,0,0,0,0.107420244868274,0,0,0.0890320356467374,0,0,0,0,0,0,0,0.308033580176089,0,0.869932992075073,0,0,0.372158369359667,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243713489631284,0,0,0,0,0,0,0,0,0,0.405820753925408,0,0,0,0,0,0,0,0,0,0.349934720244983,0.0962221127255121,0,0,5.46034044505319,0,0,0,0,0,0,0.569647187174163,0,0,0,0,0,0.640944426764839,0,0,0,0,0,0,0,0,0,0.324621940274555,0,0,0,0,0,0,0,0.851692475380653,0,0.307240764308458,0,0,0,0,0,0,0,0,2.8071081061233,0,0.242721043499027,0,0.852408440419239,0.23874448473769,0,0,0,0.281338832821026,0,0.329607748453519,0,0.19924798825107,0.552567831062295,9.82537716631677,0,0.369254416383208,0,0.179736702294654,0.716084698702437,0,0,0,0,0,0.185536196323703,0,0,0,0,0.455173793141999,0,0,0.344743373241465,0,0,0.885741385813839,0,0,0.221158519862449,0,0,0,0.139423744278603,0.0769502585037971,0,7.14748103602986,1.97466817701499,2.39024218228418,0.31900115973192,0,0,0,0.156980256395025,0.166211681900156,0,0,0,0,0,0,0.489698424477443,6.9263005002631,0,1.99052386215701,8.31501106331388,6.11030144933625,0,0,0.104421949505455,0.067401132980677,0,0,0,0.586993856796269,0,0,15.7287930863263,0,0,0.751617097072463,0,0,0,0,1.19472429772959,0.569219092059585,0,0,0,0,0.698906672968121,0,0.387025325156341,0.292357268344742,0.246346371159628,0,0,0,0,0,0.0633107959558787,0.586654148204409,0,1.92107695265417,0,5.04316460039371,0.687219576995494,3.60349495510126,0,0.124252535565433,0.471388069233591,0.271808412147228,0,0,0,0,0,0,0,0,0.837847203816763,0,0,0.998395002494955,0.858452096273142,0.223171457441873,0.268733889946905,0.360299883542404,17.4743924291181,21.8229414991009,17.801825410332,19.2100099984427,1.27955725969173,0.0846733320657845,0,0,0.803765742325096,0.550157746388935,1.24632101408756,0,0,0,0,3.38864541386552,1.78345599658994,0,0.179287339332845,0,0,0,1.27134268827375,0,0,0,1.19730191562487,0.164185041498678,0,0,13.7759099657397,22.5261711150776,0.387848869084652,0,4.10608410922391,0,0,0,0,0.496166021811951,0,0,0,0,0,0,0,0.314108192500469,0,0,0,0,0,0.18628920882415,0.553394539744923,0,0.151649117541648,0,0,0,0.144921028610825,0,0.233713309847224,0,0,0,0,0.228840068396924,0,0,0,0,0,0.155262956876259,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26184898228651,0,0.214441591374926,0,0,0,0,0.179088841081487,0,0,0,0,0,2.81865670446741,0,0,0.138258436151731,0,0,0,0,0,0,0.999936979274649,0,0.172214979660816,0,0,0,0,0.127894371303652,0.215649622793364,0,0.109209638192014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138314504928436,0.161475645631851,0,0.196295437002051,0.589848616738702,0,0,0,0,0,0.0752103283492573,0,0.781514011233092,2.09525355585138,0,0.591424344868181,0.0675375846183947,0,0,0,0,0,0,0,0,0,0,0,0.455324382702595,1.06442844195167,0,0,0.271878931907327,0.263091094251396,0.118193840883968,0,0.078493092850514,0,4.20408244970683,1.82631744101899,0.647782773655864,0.9555033757741,0.285906176706625,0,0,0,0,0,0,0,0,0.236664001461131,0.170426809518315,0,0,0,0,0,0.490751168076215,9.14384437367021,0,0,0,0,0.701818390386317,0,0,0,0,0.603851374266694,12.8880844040268,22.9487538529155,0,0,0.235676547101626,0.196308467114945,0,0,0.169927114687817,0,0.128915775947154,0,0.178553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| |||
|short_description=p8@SHISA5 | |||
}} |
Revision as of 00:28, 13 September 2013
Short description: | p8@SHISA5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_8_at_SHISA5_5end |
Coexpression cluster: | [[Coexpression cluster:C304|]] |
Association with transcript: | 18bp_to_ENST00000465449, uc011bbk.1_5end |
EntrezGene: | SHISA5 |
HGNC: | 30376 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 3.74e-24 | 7 |
germ cell | 3.74e-24 | 7 |
hepatocyte | 1.09e-19 | 12 |
endodermal cell | 1.09e-09 | 58 |
Ontology term | p-value | n |
---|---|---|
cell type cancer | 4.31e-07 | 143 |
germ cell and embryonal cancer | 5.02e-07 | 22 |
germ cell cancer | 5.02e-07 | 22 |
carcinoma | 5.33e-07 | 106 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.