FFCP PHASE1:Mm9::chr14:57994925..57994930,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=73|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr14:57994925..57994930,-|id=chr14:57994925..57994930,-|ontology_enrichment_celltype=CL:0000181!9.55e-18!5;CL:0000417!9.55e-18!5;CL:0000668!9.55e-18!5;CL:0000412!9.55e-18!5;CL:0000182!9.55e-18!5;CL:0000414!3.65e-08!11;CL:0000057!6.50e-07!1;CL:0000632!6.50e-07!1|ontology_enrichment_celltype_v019_2=CL:0000182,7.36e-40,5;CL:0000057,4.85e-14,1;CL:0000632,4.85e-14,1;CL:0000223,2.09e-10,20;CL:0000066,2.05e-08,25;CL:0002320,4.50e-07,46;CL:0000134,4.50e-07,46|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002107!4.94e-15!22;UBERON:0007499!4.94e-15!22;UBERON:0006925!4.94e-15!22;UBERON:0009497!4.94e-15!22;UBERON:0000015!4.94e-15!22;UBERON:0002423!4.94e-15!22;UBERON:0006235!4.94e-15!22;UBERON:0008835!4.94e-15!22;UBERON:0003894!4.94e-15!22;UBERON:0004161!4.94e-15!22;UBERON:0008836!4.94e-15!22;UBERON:0009854!2.44e-14!23;UBERON:0009856!2.44e-14!23;UBERON:0002365!4.06e-13!25;UBERON:0002330!4.06e-13!25;UBERON:0003914!2.90e-12!47;UBERON:0005256!3.48e-08!47;UBERON:0005172!8.41e-08!49;UBERON:0005173!8.41e-08!49;UBERON:0002417!8.41e-08!49;UBERON:0000916!8.41e-08!49|ontology_enrichment_uberon_v019_2=UBERON:0002107,6.73e-28,22;UBERON:0007499,6.73e-28,22;UBERON:0006925,6.73e-28,22;UBERON:0009497,6.73e-28,22;UBERON:0000015,6.73e-28,22;UBERON:0002423,6.73e-28,22;UBERON:0006235,6.73e-28,22;UBERON:0008835,6.73e-28,22;UBERON:0003894,6.73e-28,22;UBERON:0004161,6.73e-28,22;UBERON:0008836,6.73e-28,22;UBERON:0009854,1.06e-26,23;UBERON:0009856,1.06e-26,23;UBERON:0002365,1.35e-24,25;UBERON:0002330,1.35e-24,25;UBERON:0005256,8.60e-14,45;UBERON:0003914,3.25e-13,47;UBERON:0005172,1.11e-12,49;UBERON:0005173,1.11e-12,49;UBERON:0002417,1.11e-12,49;UBERON:0000916,1.11e-12,49;UBERON:0003929,2.55e-11,55;UBERON:0002368,2.18e-10,60;UBERON:0003104,3.20e-10,61;UBERON:0009142,3.20e-10,61;UBERON:0002530,1.34e-09,65;UBERON:0000490,1.86e-09,66;UBERON:0009569,1.86e-09,66;UBERON:0005911,4.75e-09,69;UBERON:0000949,1.12e-08,72;UBERON:0005177,6.48e-08,79;UBERON:0001041,8.13e-08,80;UBERON:0002384,4.50e-07,46;UBERON:0002100,5.94e-07,90|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285650984403804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.88339101585109,1.3599426674155,8.63525106620507,1.29955283489534,1.79210754838934,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0.125666591329675,0,0.433798070759735,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0,0,0.134206418760372,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.96452627087149,0,0,0,0,0,0,0,0,0,0,0,0,0,0.538192240565737,2.41221760681684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.388844919875379,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr14:57994925..57994930,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=73 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr14:57994925..57994930,- | |||
|id=chr14:57994925..57994930,- | |||
|ontology_enrichment_celltype=CL:0000181!9.55e-18!5;CL:0000417!9.55e-18!5;CL:0000668!9.55e-18!5;CL:0000412!9.55e-18!5;CL:0000182!9.55e-18!5;CL:0000414!3.65e-08!11;CL:0000057!6.50e-07!1;CL:0000632!6.50e-07!1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,7.36e-40,5;CL:0000057,4.85e-14,1;CL:0000632,4.85e-14,1;CL:0000223,2.09e-10,20;CL:0000066,2.05e-08,25;CL:0002320,4.50e-07,46;CL:0000134,4.50e-07,46 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!4.94e-15!22;UBERON:0007499!4.94e-15!22;UBERON:0006925!4.94e-15!22;UBERON:0009497!4.94e-15!22;UBERON:0000015!4.94e-15!22;UBERON:0002423!4.94e-15!22;UBERON:0006235!4.94e-15!22;UBERON:0008835!4.94e-15!22;UBERON:0003894!4.94e-15!22;UBERON:0004161!4.94e-15!22;UBERON:0008836!4.94e-15!22;UBERON:0009854!2.44e-14!23;UBERON:0009856!2.44e-14!23;UBERON:0002365!4.06e-13!25;UBERON:0002330!4.06e-13!25;UBERON:0003914!2.90e-12!47;UBERON:0005256!3.48e-08!47;UBERON:0005172!8.41e-08!49;UBERON:0005173!8.41e-08!49;UBERON:0002417!8.41e-08!49;UBERON:0000916!8.41e-08!49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,6.73e-28,22;UBERON:0007499,6.73e-28,22;UBERON:0006925,6.73e-28,22;UBERON:0009497,6.73e-28,22;UBERON:0000015,6.73e-28,22;UBERON:0002423,6.73e-28,22;UBERON:0006235,6.73e-28,22;UBERON:0008835,6.73e-28,22;UBERON:0003894,6.73e-28,22;UBERON:0004161,6.73e-28,22;UBERON:0008836,6.73e-28,22;UBERON:0009854,1.06e-26,23;UBERON:0009856,1.06e-26,23;UBERON:0002365,1.35e-24,25;UBERON:0002330,1.35e-24,25;UBERON:0005256,8.60e-14,45;UBERON:0003914,3.25e-13,47;UBERON:0005172,1.11e-12,49;UBERON:0005173,1.11e-12,49;UBERON:0002417,1.11e-12,49;UBERON:0000916,1.11e-12,49;UBERON:0003929,2.55e-11,55;UBERON:0002368,2.18e-10,60;UBERON:0003104,3.20e-10,61;UBERON:0009142,3.20e-10,61;UBERON:0002530,1.34e-09,65;UBERON:0000490,1.86e-09,66;UBERON:0009569,1.86e-09,66;UBERON:0005911,4.75e-09,69;UBERON:0000949,1.12e-08,72;UBERON:0005177,6.48e-08,79;UBERON:0001041,8.13e-08,80;UBERON:0002384,4.50e-07,46;UBERON:0002100,5.94e-07,90 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285650984403804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.88339101585109,1.3599426674155,8.63525106620507,1.29955283489534,1.79210754838934,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0.125666591329675,0,0.433798070759735,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0,0,0.134206418760372,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.96452627087149,0,0,0,0,0,0,0,0,0,0,0,0,0,0.538192240565737,2.41221760681684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.388844919875379,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr14:57994925..57994930,- | |||
}} |
Revision as of 02:36, 13 September 2013
Short description: | p@chr14:57994925..57994930, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr14:57994925..57994930, - |
Coexpression cluster: | MCL_coexpression_mm9:73 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 7.36e-40 | 5 |
fibroblast | 4.85e-14 | 1 |
hepatic stellate cell | 4.85e-14 | 1 |
endodermal cell | 2.09e-10 | 20 |
epithelial cell | 2.05e-08 | 25 |
connective tissue cell | 4.50e-07 | 46 |
mesenchymal cell | 4.50e-07 | 46 |
Ontology term | p-value | n |
---|---|---|
liver | 6.73e-28 | 22 |
epithelial sac | 6.73e-28 | 22 |
digestive gland | 6.73e-28 | 22 |
epithelium of foregut-midgut junction | 6.73e-28 | 22 |
anatomical boundary | 6.73e-28 | 22 |
hepatobiliary system | 6.73e-28 | 22 |
foregut-midgut junction | 6.73e-28 | 22 |
hepatic diverticulum | 6.73e-28 | 22 |
liver primordium | 6.73e-28 | 22 |
septum transversum | 6.73e-28 | 22 |
liver bud | 6.73e-28 | 22 |
digestive tract diverticulum | 1.06e-26 | 23 |
sac | 1.06e-26 | 23 |
exocrine gland | 1.35e-24 | 25 |
exocrine system | 1.35e-24 | 25 |
trunk mesenchyme | 8.60e-14 | 45 |
epithelial tube | 3.25e-13 | 47 |
abdomen element | 1.11e-12 | 49 |
abdominal segment element | 1.11e-12 | 49 |
abdominal segment of trunk | 1.11e-12 | 49 |
abdomen | 1.11e-12 | 49 |
gut epithelium | 2.55e-11 | 55 |
endocrine gland | 2.18e-10 | 60 |
mesenchyme | 3.20e-10 | 61 |
entire embryonic mesenchyme | 3.20e-10 | 61 |
gland | 1.34e-09 | 65 |
unilaminar epithelium | 1.86e-09 | 66 |
subdivision of trunk | 1.86e-09 | 66 |
endo-epithelium | 4.75e-09 | 69 |
endocrine system | 1.12e-08 | 72 |
trunk region element | 6.48e-08 | 79 |
foregut | 8.13e-08 | 80 |
connective tissue | 4.50e-07 | 46 |
trunk | 5.94e-07 | 90 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.