FFCP PHASE1:Mm9::chr16:31749241..31749247,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr16:31749241..31749247,+|id=chr16:31749241..31749247,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000192,1.06e-11,3;CL:0000359,1.06e-11,3;CL:0002539,1.06e-11,3;CL:0000514,1.06e-11,3;CL:0000217,9.61e-08,2;CL:0000328,9.61e-08,2;CL:0002573,9.61e-08,2;CL:0002376,9.61e-08,2;CL:0000218,9.61e-08,2;CL:0000692,9.61e-08,2;CL:0002377,9.61e-08,2;CL:0002375,9.61e-08,2|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0001135,1.06e-11,3;UBERON:0004237,1.06e-11,3;UBERON:0004695,1.06e-11,3;UBERON:0002111,1.06e-11,3;UBERON:0004178,1.06e-11,3;UBERON:0000947,6.99e-09,4;UBERON:0001637,6.99e-09,4;UBERON:0004573,6.99e-09,4;UBERON:0003509,6.99e-09,4;UBERON:0004571,6.99e-09,4;UBERON:0010191,6.99e-09,4;UBERON:0004572,6.99e-09,4;UBERON:0001962,6.47e-08,2;UBERON:0001961,6.47e-08,2;UBERON:0001744,6.47e-08,2;UBERON:0000055,3.50e-07,5;UBERON:0007500,3.50e-07,5;UBERON:0001981,3.50e-07,5;UBERON:0002049,3.50e-07,5;UBERON:0007798,3.50e-07,5;UBERON:0004537,3.50e-07,5;UBERON:0006965,3.50e-07,5|phase1_expression=0,0.348975407639361,0.454999239389536,0,0.500895729946347,0.16787927191189,0.700837921786577,0.774739940649458,0.422366166455,0.468129052643987,0.171217968225505,0.398860794976682,0.171200729931206,1.13646523144697,0.333109761815663,0.404950534779652,0,0,0.137114433605739,0,2.46625541438102,0.198581902401771,0.261199789138935,1.11994695955385,2.06468352960453,0,0,0.215471232685889,0.760093677825496,0.252030129759931,0.221730510655305,0,0,0,0,0.166234645358492,0.204169356262369,0.418531630736908,1.5626706890476,0,0,0.683045484958446,0,1.51076181570693,2.33166941804883,1.65192076945513,0,0,0.219686182734472,0.194429899074283,0,0,0.335565212115473,0.725362142011344,0.336093799142464,0,0.85960031981627,0.515672092277442,0.202316460859598,0,0,0,0,0,0,0,0.299600110518405,0,1.14058573539325,0.135005938331691,0.210324961351382,0,0.220868540951614,0.489963196859816,0.383381884072945,0,0,0.255374676170375,0.307213066512487,0.131886287730194,0.274462930807229,0,0.279182999001381,0,0.30559649555362,0.294628585473668,0.142371680799103,0.186399445825301,1.36307147999731,1.13357340160178,0.289864488701678,0,0.679971333707751,1.07940638327563,0.649776417447669,0,0.140444420131752,0.511290967734173,0.259786004602869,0,0.281686839553361,3.84979432242953,0,0,0.216491041011214,0,0,2.16949371466214,0.258937883647172,0.29688427812965,0,0.608930956624282,0.230615497256059,0.753613202763113,0.352766121407114,0,0,0.144599356919912,0,0.161766849947409,0.220841518460394,0,0,0,0.41889341362691,0.510914110417183,0.239630249011841,0,0,0,0,0,0.347648640384553,0,0.20778804455956,0,0.305518091550949,0.124406970610093,0.758168275301024,0,0.130120442962704,0,0,0.30140963567143,0.204109497453984,0.640568601424249,0.281105173679186,1.03481348295606,0,0.189106080167819,0.175951124163949,0,0.834141747676794,0,0.205782136407943,0.59710280045548,0.702213187313235,0,0,0.207125772535502,0.703578179943289,0.36012412292203,0,0.196764231747404,0.617068451549513,0.697601834251224,0,0.116765342367169,0.16455984991348,0.32833492815819,0.324275238183423,0.584799949701329,0.219550115291051,0,0,0.308713837137853,0,0,0.426576501070468,0.928946687441754,0.38660238396628,0,0.444756087689741,0.190225626112559,0,0.164698954724011,0.502670417600539,0.397912944082302,0.58489226135736,0.898819408654221,1.29682829924817,0.995706366271836,0,0.456994050438915,0,0.610953983535943,0.581857461502877,0.350679099451593,0.632365371242573,0.147610147979602,0.31399745568275,0.123397163921801,0,0.166845105716094,0.589676985339609,0.449724224769707,0.202860121388503,0,0.25462585178142,0,0.162135226775035,0.274561413188081,2.87536413054709,1.48856379067401,0,0.505157755894224,0,0.482443521363367,0.184753190166605,0,0.325929952884052,0.169745085775188,0.938760993154008,0.167506257441816,0.238043640886014,0.195133647857799,0.472905432318573,0.221464689648775,0,1.47476983244164,1.03610989119537,0.433947175744535,0,1.08781136763742,0,0.275936746304732,0,0.117211686592203,0.327869890753351,0.252470927204373,0.315508219416257,0,0.215423397732799,0.238968797952552,0.891194696329576,1.13230612315533,0.404810701674894,0.584511715822624,0.395287777946524,0,0.425820255624806,0,0.162886959353576,0.329940245945071,0,0,0.302323556964751,0.943025398779491,0,0.307435147943927,0,0.727067458955011,0,0.948110273807448,0,0,0.340439605753788,0.36012218806262,0,0.214337035031592,0.354680467284547,0,0,0,0,0,0,0,0.484393280087717,0.120625849856312,0.835606408021955,0.164140899745061,0,0,0.170870880797853,0,0.185194527369712,1.88368457004691,0.956859594047176,0.457556346413045,0.169978429993855,0,0,0,0.158167996790568,0,0.324016022465404,0.418176592028937,0.218362563746178,0.134864346384821,0.247960367176008,0.26175594198403,0.648074866458964,0.621339313086926,0,0.149516546043979,0,0,0.258319646955462,0.168956125490778,0.46942895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| ||
|EntrezGene=NA | |||
|HGNC= | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr16:31749241..31749247,+ | |||
|id=chr16:31749241..31749247,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000192,1.06e-11,3;CL:0000359,1.06e-11,3;CL:0002539,1.06e-11,3;CL:0000514,1.06e-11,3;CL:0000217,9.61e-08,2;CL:0000328,9.61e-08,2;CL:0002573,9.61e-08,2;CL:0002376,9.61e-08,2;CL:0000218,9.61e-08,2;CL:0000692,9.61e-08,2;CL:0002377,9.61e-08,2;CL:0002375,9.61e-08,2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001135,1.06e-11,3;UBERON:0004237,1.06e-11,3;UBERON:0004695,1.06e-11,3;UBERON:0002111,1.06e-11,3;UBERON:0004178,1.06e-11,3;UBERON:0000947,6.99e-09,4;UBERON:0001637,6.99e-09,4;UBERON:0004573,6.99e-09,4;UBERON:0003509,6.99e-09,4;UBERON:0004571,6.99e-09,4;UBERON:0010191,6.99e-09,4;UBERON:0004572,6.99e-09,4;UBERON:0001962,6.47e-08,2;UBERON:0001961,6.47e-08,2;UBERON:0001744,6.47e-08,2;UBERON:0000055,3.50e-07,5;UBERON:0007500,3.50e-07,5;UBERON:0001981,3.50e-07,5;UBERON:0002049,3.50e-07,5;UBERON:0007798,3.50e-07,5;UBERON:0004537,3.50e-07,5;UBERON:0006965,3.50e-07,5 | |||
|phase1_expression=0,0.348975407639361,0.454999239389536,0,0.500895729946347,0.16787927191189,0.700837921786577,0.774739940649458,0.422366166455,0.468129052643987,0.171217968225505,0.398860794976682,0.171200729931206,1.13646523144697,0.333109761815663,0.404950534779652,0,0,0.137114433605739,0,2.46625541438102,0.198581902401771,0.261199789138935,1.11994695955385,2.06468352960453,0,0,0.215471232685889,0.760093677825496,0.252030129759931,0.221730510655305,0,0,0,0,0.166234645358492,0.204169356262369,0.418531630736908,1.5626706890476,0,0,0.683045484958446,0,1.51076181570693,2.33166941804883,1.65192076945513,0,0,0.219686182734472,0.194429899074283,0,0,0.335565212115473,0.725362142011344,0.336093799142464,0,0.85960031981627,0.515672092277442,0.202316460859598,0,0,0,0,0,0,0,0.299600110518405,0,1.14058573539325,0.135005938331691,0.210324961351382,0,0.220868540951614,0.489963196859816,0.383381884072945,0,0,0.255374676170375,0.307213066512487,0.131886287730194,0.274462930807229,0,0.279182999001381,0,0.30559649555362,0.294628585473668,0.142371680799103,0.186399445825301,1.36307147999731,1.13357340160178,0.289864488701678,0,0.679971333707751,1.07940638327563,0.649776417447669,0,0.140444420131752,0.511290967734173,0.259786004602869,0,0.281686839553361,3.84979432242953,0,0,0.216491041011214,0,0,2.16949371466214,0.258937883647172,0.29688427812965,0,0.608930956624282,0.230615497256059,0.753613202763113,0.352766121407114,0,0,0.144599356919912,0,0.161766849947409,0.220841518460394,0,0,0,0.41889341362691,0.510914110417183,0.239630249011841,0,0,0,0,0,0.347648640384553,0,0.20778804455956,0,0.305518091550949,0.124406970610093,0.758168275301024,0,0.130120442962704,0,0,0.30140963567143,0.204109497453984,0.640568601424249,0.281105173679186,1.03481348295606,0,0.189106080167819,0.175951124163949,0,0.834141747676794,0,0.205782136407943,0.59710280045548,0.702213187313235,0,0,0.207125772535502,0.703578179943289,0.36012412292203,0,0.196764231747404,0.617068451549513,0.697601834251224,0,0.116765342367169,0.16455984991348,0.32833492815819,0.324275238183423,0.584799949701329,0.219550115291051,0,0,0.308713837137853,0,0,0.426576501070468,0.928946687441754,0.38660238396628,0,0.444756087689741,0.190225626112559,0,0.164698954724011,0.502670417600539,0.397912944082302,0.58489226135736,0.898819408654221,1.29682829924817,0.995706366271836,0,0.456994050438915,0,0.610953983535943,0.581857461502877,0.350679099451593,0.632365371242573,0.147610147979602,0.31399745568275,0.123397163921801,0,0.166845105716094,0.589676985339609,0.449724224769707,0.202860121388503,0,0.25462585178142,0,0.162135226775035,0.274561413188081,2.87536413054709,1.48856379067401,0,0.505157755894224,0,0.482443521363367,0.184753190166605,0,0.325929952884052,0.169745085775188,0.938760993154008,0.167506257441816,0.238043640886014,0.195133647857799,0.472905432318573,0.221464689648775,0,1.47476983244164,1.03610989119537,0.433947175744535,0,1.08781136763742,0,0.275936746304732,0,0.117211686592203,0.327869890753351,0.252470927204373,0.315508219416257,0,0.215423397732799,0.238968797952552,0.891194696329576,1.13230612315533,0.404810701674894,0.584511715822624,0.395287777946524,0,0.425820255624806,0,0.162886959353576,0.329940245945071,0,0,0.302323556964751,0.943025398779491,0,0.307435147943927,0,0.727067458955011,0,0.948110273807448,0,0,0.340439605753788,0.36012218806262,0,0.214337035031592,0.354680467284547,0,0,0,0,0,0,0,0.484393280087717,0.120625849856312,0.835606408021955,0.164140899745061,0,0,0.170870880797853,0,0.185194527369712,1.88368457004691,0.956859594047176,0.457556346413045,0.169978429993855,0,0,0,0.158167996790568,0,0.324016022465404,0.418176592028937,0.218362563746178,0.134864346384821,0.247960367176008,0.26175594198403,0.648074866458964,0.621339313086926,0,0.149516546043979,0,0,0.258319646955462,0.168956125490778,0.469428954583016,0.651021924219751,0.209718688851422,0.483168241652012,0.288030006257865,0,0.405450430580328,0.616265742988964,0.51968329191118,0,0,0.841368146639782,0.590758108698309,0.100966449948148,0.381034033274999,0.705783295957884,0.584747284438515,0.192423683280659,0.701261413089414,0,0,0.179427713218951,0.167884616364078,0.386379188064381,0.187682475451182,0.73260649706906,0.428736758158132,1.50471631210609,0.564751842617067,0,0,0.343706364687375,0,0,0,0,0.906284817968409,0,0.103787347584177,0,0.682934423016537,0.486213434136588,0,0,0.222246727801615,0.412070114477788,0.962757628775446,0.758091635291392,0,0,0.561849044819294,0.448176066834085,0.229741875822453,0.476293691283074,0.231768651889711,0.77163688185482,0.412085900803307,0.294397840268795,0.342869252385415,1.06485483695602,0.715308569841963,0.290692833264657,0.188218760830661,0.592302255241736,0.73171189149109,0.526139422875686,0.950628796921032,1.12228454331548,0,0.197008964751127,0.409231043169689,0.154936841185966,0,0.499621155875892,0,0.429742108096597,0,0,0.231867835620421 | |||
|short_description=p@chr16:31749241..31749247,+ | |||
}} |
Revision as of 12:25, 13 September 2013
Short description: | p@chr16:31749241..31749247, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr16:31749241..31749247, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell | 1.06e-11 | 3 |
vascular associated smooth muscle cell | 1.06e-11 | 3 |
aortic smooth muscle cell | 1.06e-11 | 3 |
smooth muscle myoblast | 1.06e-11 | 3 |
insulating cell | 9.61e-08 | 2 |
myelin accumulating cell | 9.61e-08 | 2 |
Schwann cell | 9.61e-08 | 2 |
non-myelinating Schwann cell | 9.61e-08 | 2 |
myelinating Schwann cell;;Schwann cell | 9.61e-08 | 2 |
terminal Schwann cell | 9.61e-08 | 2 |
immature Schwann cell | 9.61e-08 | 2 |
Schwann cell precursor | 9.61e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
smooth muscle tissue | 1.06e-11 | 3 |
blood vessel smooth muscle | 1.06e-11 | 3 |
arterial system smooth muscle | 1.06e-11 | 3 |
artery smooth muscle tissue | 1.06e-11 | 3 |
aorta smooth muscle tissue | 1.06e-11 | 3 |
aorta | 6.99e-09 | 4 |
artery | 6.99e-09 | 4 |
systemic artery | 6.99e-09 | 4 |
arterial blood vessel | 6.99e-09 | 4 |
systemic arterial system | 6.99e-09 | 4 |
aortic system | 6.99e-09 | 4 |
arterial system | 6.99e-09 | 4 |
gut-associated lymphoid tissue | 6.47e-08 | 2 |
mucosa-associated lymphoid tissue | 6.47e-08 | 2 |
lymphoid tissue | 6.47e-08 | 2 |
vessel | 3.50e-07 | 5 |
epithelial tube open at both ends | 3.50e-07 | 5 |
blood vessel | 3.50e-07 | 5 |
vasculature | 3.50e-07 | 5 |
vascular system | 3.50e-07 | 5 |
blood vasculature | 3.50e-07 | 5 |
vascular cord | 3.50e-07 | 5 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.