FFCP PHASE1:Hg19::chr5:122179976..122179996,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=28966|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=21533|TSSclassifier=S|UniProt=|association_with_transcript=49bp_to_ENST00000511211_5end|coexpression_cluster_id=C50|description=CAGE_peak_8_at_SNX24_5end|id=chr5:122179976..122179996,+|ontology_enrichment_celltype=CL:0001014!1.41e-12!2;CL:0001016!1.41e-12!2;CL:1000415!8.57e-12!2;CL:0002537!2.62e-11!5;CL:0002541!5.29e-09!3|ontology_enrichment_celltype_v019=CL:0002541;8.37e-39;3!CL:0000349;2.05e-24;19!CL:0002537;1.14e-23;5!CL:0001014;2.05e-15;2!CL:0001016;2.05e-15;2!CL:0000134;1.84e-07;55!CL:0000453;6.04e-07;5|ontology_enrichment_celltype_v019_2=CL:0002541,8.37e-39,3;CL:0000349,2.05e-24,19;CL:0002537,1.14e-23,5;CL:0001014,2.05e-15,2;CL:0001016,2.05e-15,2;CL:0000453,6.04e-07,5|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005631!7.04e-20!14;UBERON:0000158!7.04e-20!14;UBERON:0003124!9.93e-14!7;UBERON:0000478!3.32e-11!24;UBERON:0000476!5.29e-09!3;UBERON:0000920!5.29e-09!3;UBERON:0000305!3.37e-08!7;UBERON:0002110!3.76e-08!3;UBERON:0006242!3.76e-08!3;UBERON:0002294!1.05e-07!7;UBERON:0001173!1.05e-07!7;UBERON:0004912!1.05e-07!7;UBERON:0004871!3.19e-07!8|ontology_enrichment_uberon_v019=UBERON:0005631;9.95e-46;10!UBERON:0000158;9.95e-46;10!UBERON:0003124;8.37e-39;3!UBERON:0000920;8.37e-39;3!UBERON:0000478;1.83e-19;24!UBERON:0000305;3.15e-17;7!UBERON:0002394;2.52e-08;4!UBERON:0003928;2.52e-08;4|ontology_enrichment_uberon_v019_2=UBERON:0000920,8.37e-39,3;UBERON:0005631,6.95e-33,14;UBERON:0000158,6.95e-33,14;UBERON:0000478,1.83e-19,24;UBERON:0003124,2.67e-17,7;UBERON:0000305,3.15e-17,7;UBERON:0004871,3.29e-15,8;UBERON:0004923,2.18e-07,66|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205601498999509,0,0,0,0,0,0,0.221533894583621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0.100528972411631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283550194484773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303127571446259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.384380134730212,0.255225424989168,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.886860307073351,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.29740072527842,0.593929361665277,6.75753544618311,0,0,0,0,0,0,0,0,0,0,0,0,1.07412704805365,0,0,0,0,0,0,0,0,0,0,0,0,0.472775363535873,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179515288819544,0,7.97502899329799,0,5.33034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0.0870592065804026,0,0,0,0,0,0,0,0,0,0,0,0.195551382734803,0.0801588202515337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160753148465019,0,0,0.2249738915515,2.32140586367385,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213574825135389,0,0,0,0,0,1.27668251554036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139879507719444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.532214220975833,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0.267964130156178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p8@SNX24}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=28966 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21533 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=49bp_to_ENST00000511211_5end | |||
|coexpression_cluster_id=C50 | |||
|description=CAGE_peak_8_at_SNX24_5end | |||
|id=chr5:122179976..122179996,+ | |||
|ontology_enrichment_celltype=CL:0001014!1.41e-12!2;CL:0001016!1.41e-12!2;CL:1000415!8.57e-12!2;CL:0002537!2.62e-11!5;CL:0002541!5.29e-09!3 | |||
|ontology_enrichment_celltype_v019=CL:0002541;8.37e-39;3!CL:0000349;2.05e-24;19!CL:0002537;1.14e-23;5!CL:0001014;2.05e-15;2!CL:0001016;2.05e-15;2!CL:0000134;1.84e-07;55!CL:0000453;6.04e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002541,8.37e-39,3;CL:0000349,2.05e-24,19;CL:0002537,1.14e-23,5;CL:0001014,2.05e-15,2;CL:0001016,2.05e-15,2;CL:0000453,6.04e-07,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!7.04e-20!14;UBERON:0000158!7.04e-20!14;UBERON:0003124!9.93e-14!7;UBERON:0000478!3.32e-11!24;UBERON:0000476!5.29e-09!3;UBERON:0000920!5.29e-09!3;UBERON:0000305!3.37e-08!7;UBERON:0002110!3.76e-08!3;UBERON:0006242!3.76e-08!3;UBERON:0002294!1.05e-07!7;UBERON:0001173!1.05e-07!7;UBERON:0004912!1.05e-07!7;UBERON:0004871!3.19e-07!8 | |||
|ontology_enrichment_uberon_v019=UBERON:0005631;9.95e-46;10!UBERON:0000158;9.95e-46;10!UBERON:0003124;8.37e-39;3!UBERON:0000920;8.37e-39;3!UBERON:0000478;1.83e-19;24!UBERON:0000305;3.15e-17;7!UBERON:0002394;2.52e-08;4!UBERON:0003928;2.52e-08;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000920,8.37e-39,3;UBERON:0005631,6.95e-33,14;UBERON:0000158,6.95e-33,14;UBERON:0000478,1.83e-19,24;UBERON:0003124,2.67e-17,7;UBERON:0000305,3.15e-17,7;UBERON:0004871,3.29e-15,8;UBERON:0004923,2.18e-07,66 | |||
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|short_description=p8@SNX24 | |||
}} |
Revision as of 12:53, 13 September 2013
Short description: | p8@SNX24 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_8_at_SNX24_5end |
Coexpression cluster: | C50_chorionic_placenta_amniotic_migratory_smallcell_chronic_choriocarcinoma |
Association with transcript: | 49bp_to_ENST00000511211_5end |
EntrezGene: | SNX24 |
HGNC: | 21533 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 8.37e-39 | 3 |
extraembryonic cell | 2.05e-24 | 19 |
amnion mesenchymal stem cell | 1.14e-23 | 5 |
CD1a-positive Langerhans cell | 2.05e-15 | 2 |
immature CD1a-positive Langerhans cell | 2.05e-15 | 2 |
Langerhans cell | 6.04e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
egg chorion | 8.37e-39 | 3 |
extraembryonic membrane | 6.95e-33 | 14 |
membranous layer | 6.95e-33 | 14 |
extraembryonic structure | 1.83e-19 | 24 |
chorion | 2.67e-17 | 7 |
amnion | 3.15e-17 | 7 |
somatic layer of lateral plate mesoderm | 3.29e-15 | 8 |
organ component layer | 2.18e-07 | 66 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.