FFCP PHASE1:Mm9::chr19:10303261..10303283,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr19:10303261..10303283,-|id=chr19:10303261..10303283,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000192,3.66e-13,3;CL:0000359,3.66e-13,3;CL:0002539,3.66e-13,3;CL:0000514,3.66e-13,3;CL:0002679,8.42e-10,1;CL:0000680,4.99e-07,6;CL:0000187,4.99e-07,6;CL:0000056,4.99e-07,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0001135,3.66e-13,3;UBERON:0004237,3.66e-13,3;UBERON:0004695,3.66e-13,3;UBERON:0002111,3.66e-13,3;UBERON:0004178,3.66e-13,3;UBERON:0000947,4.16e-10,4;UBERON:0001637,4.16e-10,4;UBERON:0004573,4.16e-10,4;UBERON:0003509,4.16e-10,4;UBERON:0004571,4.16e-10,4;UBERON:0010191,4.16e-10,4;UBERON:0004572,4.16e-10,4;UBERON:0000055,2.90e-08,5;UBERON:0007500,2.90e-08,5;UBERON:0001981,2.90e-08,5;UBERON:0002049,2.90e-08,5;UBERON:0007798,2.90e-08,5;UBERON:0004537,2.90e-08,5;UBERON:0006965,2.90e-08,5|phase1_expression=0,0.348975407639361,0.454999239389536,0.30246421130683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0.319984845586813,0,0,0,0,0,0.252030129759931,0,0,0,0,0.288851619751275,0,0,0,0,0,0,0,0,2.7697299954627,2.93993100536592,0.550640256485045,0,0,0,0,0,0,0,0,0,0,0.286533439938757,0.515672092277442,0,0,0,0.338844532069132,1.77858959222228,0,0,0,0.599200221036809,0.384218305321555,0,0.135005938331691,0,0,0,0,0,0,1.10115880999389,0.383062014255563,0.614426133024974,0,0,0,1.11673199600552,0,0.763991238884051,0,0.142371680799103,0,0,0,0.289864488701678,0,0,0,1.29955283489534,0.448026887097336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.304465478312141,0,0,0.23517741427141,0,0.247194967734374,0.578397427679647,0,0,0,0,0,0,0.628340120440365,0,0,0,0,0.299581278809645,0,0,0,0,0.20778804455956,0.162241263067758,0.407357455401265,0,0,0,0.130120442962704,0,0,0,0.272145996605311,0,0.187403449119458,0,0,0,0.175951124163949,0,0,0,0,0.398068533636986,0,0,0,1.03562886267751,0,0.180062061461015,0.23674473558521,0.196764231747404,0,0,0,0.233530684734339,0.16455984991348,0,0,0,0,0,0,0,0,0.264450566663544,1.06644125267617,0.232236671860439,0.515469845288373,0.201683524623343,0.22237804384487,0,0.474529061544512,0,0.251335208800269,0,0,0,0,0,0,0,0,0,0,0.0701358198903186,0,0,0.156998727841375,0.123397163921801,0,0.500535317148282,0.196558995113203,0,0,0,0,0,0.162135226775035,0,1.43768206527355,0,0.624075346229121,0.505157755894224,0,0.482443521363367,0,0.189491411770485,0,0.339490171550376,0,0.167506257441816,0.238043640886014,0.585400943573396,0.157635144106191,0,0.159454768657487,0.163863314715738,0.345369963731791,0.144649058581512,0,0,0,0,0,0.468846746368813,0,0,0,0,0,0,0.222798674082394,0,0,0,0,0,0.141940085208269,0.35613120733451,0.162886959353576,0,1.32745138339963,0.242780636154981,0,0,0.295301892880773,0.307435147943927,0,0.363533729477506,0.712994756769443,0,0,0,0,0,0,0,0,0.178368817602071,0,0,0,0,0.220528398054962,0,0,0,0,0,0.291480836629851,0.741701208042039,0,0.206386867963223,0.185194527369712,0,0,0,0,0,0,0,0.949007980743406,0.203319467126849,0.108005340821801,0.418176592028937,0.436725127492355,0.269728692769641,0.165306911450672,0.785267825952089,0,0,0,0.747582730219894,0.165458490457098,0.194451188344048,0,0.168956125490778,0.234714477291508,0.13020438484395,0.314578033277133,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.187682475451182,0,0,0,0,0,0,0,0,0.755393897389701,0.675022500231806,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0640251524048693,0.0574354689556133,0,0.115884325944855,0,0,0.294397840268795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr19:10303261..10303283,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr19:10303261..10303283,- | |||
|id=chr19:10303261..10303283,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000192,3.66e-13,3;CL:0000359,3.66e-13,3;CL:0002539,3.66e-13,3;CL:0000514,3.66e-13,3;CL:0002679,8.42e-10,1;CL:0000680,4.99e-07,6;CL:0000187,4.99e-07,6;CL:0000056,4.99e-07,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001135,3.66e-13,3;UBERON:0004237,3.66e-13,3;UBERON:0004695,3.66e-13,3;UBERON:0002111,3.66e-13,3;UBERON:0004178,3.66e-13,3;UBERON:0000947,4.16e-10,4;UBERON:0001637,4.16e-10,4;UBERON:0004573,4.16e-10,4;UBERON:0003509,4.16e-10,4;UBERON:0004571,4.16e-10,4;UBERON:0010191,4.16e-10,4;UBERON:0004572,4.16e-10,4;UBERON:0000055,2.90e-08,5;UBERON:0007500,2.90e-08,5;UBERON:0001981,2.90e-08,5;UBERON:0002049,2.90e-08,5;UBERON:0007798,2.90e-08,5;UBERON:0004537,2.90e-08,5;UBERON:0006965,2.90e-08,5 | |||
|phase1_expression=0,0.348975407639361,0.454999239389536,0.30246421130683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0.319984845586813,0,0,0,0,0,0.252030129759931,0,0,0,0,0.288851619751275,0,0,0,0,0,0,0,0,2.7697299954627,2.93993100536592,0.550640256485045,0,0,0,0,0,0,0,0,0,0,0.286533439938757,0.515672092277442,0,0,0,0.338844532069132,1.77858959222228,0,0,0,0.599200221036809,0.384218305321555,0,0.135005938331691,0,0,0,0,0,0,1.10115880999389,0.383062014255563,0.614426133024974,0,0,0,1.11673199600552,0,0.763991238884051,0,0.142371680799103,0,0,0,0.289864488701678,0,0,0,1.29955283489534,0.448026887097336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.304465478312141,0,0,0.23517741427141,0,0.247194967734374,0.578397427679647,0,0,0,0,0,0,0.628340120440365,0,0,0,0,0.299581278809645,0,0,0,0,0.20778804455956,0.162241263067758,0.407357455401265,0,0,0,0.130120442962704,0,0,0,0.272145996605311,0,0.187403449119458,0,0,0,0.175951124163949,0,0,0,0,0.398068533636986,0,0,0,1.03562886267751,0,0.180062061461015,0.23674473558521,0.196764231747404,0,0,0,0.233530684734339,0.16455984991348,0,0,0,0,0,0,0,0,0.264450566663544,1.06644125267617,0.232236671860439,0.515469845288373,0.201683524623343,0.22237804384487,0,0.474529061544512,0,0.251335208800269,0,0,0,0,0,0,0,0,0,0,0.0701358198903186,0,0,0.156998727841375,0.123397163921801,0,0.500535317148282,0.196558995113203,0,0,0,0,0,0.162135226775035,0,1.43768206527355,0,0.624075346229121,0.505157755894224,0,0.482443521363367,0,0.189491411770485,0,0.339490171550376,0,0.167506257441816,0.238043640886014,0.585400943573396,0.157635144106191,0,0.159454768657487,0.163863314715738,0.345369963731791,0.144649058581512,0,0,0,0,0,0.468846746368813,0,0,0,0,0,0,0.222798674082394,0,0,0,0,0,0.141940085208269,0.35613120733451,0.162886959353576,0,1.32745138339963,0.242780636154981,0,0,0.295301892880773,0.307435147943927,0,0.363533729477506,0.712994756769443,0,0,0,0,0,0,0,0,0.178368817602071,0,0,0,0,0.220528398054962,0,0,0,0,0,0.291480836629851,0.741701208042039,0,0.206386867963223,0.185194527369712,0,0,0,0,0,0,0,0.949007980743406,0.203319467126849,0.108005340821801,0.418176592028937,0.436725127492355,0.269728692769641,0.165306911450672,0.785267825952089,0,0,0,0.747582730219894,0.165458490457098,0.194451188344048,0,0.168956125490778,0.234714477291508,0.13020438484395,0.314578033277133,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.187682475451182,0,0,0,0,0,0,0,0,0.755393897389701,0.675022500231806,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0640251524048693,0.0574354689556133,0,0.115884325944855,0,0,0.294397840268795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr19:10303261..10303283,- | |||
}} |
Revision as of 16:58, 13 September 2013
Short description: | p@chr19:10303261..10303283, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr19:10303261..10303283, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell | 3.66e-13 | 3 |
vascular associated smooth muscle cell | 3.66e-13 | 3 |
aortic smooth muscle cell | 3.66e-13 | 3 |
smooth muscle myoblast | 3.66e-13 | 3 |
natural helper lymphocyte | 8.42e-10 | 1 |
muscle precursor cell | 4.99e-07 | 6 |
muscle cell | 4.99e-07 | 6 |
myoblast | 4.99e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
smooth muscle tissue | 3.66e-13 | 3 |
blood vessel smooth muscle | 3.66e-13 | 3 |
arterial system smooth muscle | 3.66e-13 | 3 |
artery smooth muscle tissue | 3.66e-13 | 3 |
aorta smooth muscle tissue | 3.66e-13 | 3 |
aorta | 4.16e-10 | 4 |
artery | 4.16e-10 | 4 |
systemic artery | 4.16e-10 | 4 |
arterial blood vessel | 4.16e-10 | 4 |
systemic arterial system | 4.16e-10 | 4 |
aortic system | 4.16e-10 | 4 |
arterial system | 4.16e-10 | 4 |
vessel | 2.90e-08 | 5 |
epithelial tube open at both ends | 2.90e-08 | 5 |
blood vessel | 2.90e-08 | 5 |
vasculature | 2.90e-08 | 5 |
vascular system | 2.90e-08 | 5 |
blood vasculature | 2.90e-08 | 5 |
vascular cord | 2.90e-08 | 5 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.