FFCP PHASE1:Hg19::chr6:127840441..127840452,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=387104|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=21494|TSSclassifier=S|UniProt=A5PLQ8,Q5TF21|association_with_transcript=47bp_to_ENST00000556132,NM_001012279,uc003qbd.2_5end|coexpression_cluster_id=C10|description=CAGE_peak_17_at_C6orf174_5end|id=chr6:127840441..127840452,-|ontology_enrichment_celltype=CL:0000047!9.90e-15!8;CL:0002319!5.25e-14!25;CL:0000133!5.43e-12!59;CL:0000540!2.62e-11!6;CL:0000031!2.62e-11!6;CL:0000404!2.62e-11!6;CL:0000221!7.02e-10!71|ontology_enrichment_celltype_v019=CL:0000333;2.96e-20;5!CL:0000540;3.60e-17;6!CL:0000404;3.60e-17;6!CL:0002319;2.00e-14;25!CL:0002321;3.98e-07;15!CL:0000123;5.89e-07;2!CL:0000242;5.89e-07;2!CL:0000047;6.42e-07;2!CL:0002535;9.01e-07;2|ontology_enrichment_celltype_v019_2=CL:0000047,1.93e-22,8;CL:0000540,3.31e-17,6;CL:0000031,3.31e-17,6;CL:0000404,3.31e-17,6;CL:0002319,1.91e-14,25;CL:0000133,1.54e-13,59;CL:0000221,5.78e-11,72;CL:0000242,6.07e-07,2|ontology_enrichment_development_v019=CL:0000031;3.60e-17;6!CL:0000133;3.21e-07;59!UBERON:0010122;9.01e-07;2|ontology_enrichment_disease=DOID:171!7.56e-09!10;DOID:169!1.38e-08!6|ontology_enrichment_disease_v019=DOID:169;5.44e-17;6!DOID:171;1.96e-10;10!DOID:4362;1.06e-09;5|ontology_enrichment_disease_v019_2=DOID:169,5.45e-17,6;DOID:171,1.96e-10,10;DOID:4362,1.38e-09,5|ontology_enrichment_uberon=UBERON:0000073!1.06e-41!94;UBERON:0001016!1.06e-41!94;UBERON:0001017!2.87e-38!82;UBERON:0005743!8.04e-36!86;UBERON:0001049!1.81e-33!57;UBERON:0005068!1.81e-33!57;UBERON:0006241!1.81e-33!57;UBERON:0007135!1.81e-33!57;UBERON:0001893!9.97e-33!34;UBERON:0002020!1.32e-32!34;UBERON:0003528!1.32e-32!34;UBERON:0002791!2.36e-31!33;UBERON:0001869!2.66e-30!32;UBERON:0002780!4.44e-30!41;UBERON:0001890!4.44e-30!41;UBERON:0006240!4.44e-30!41;UBERON:0002616!5.45e-30!59;UBERON:0003080!3.72e-29!42;UBERON:0000955!5.15e-29!69;UBERON:0006238!5.15e-29!69;UBERON:0000924!2.44e-26!173;UBERON:0006601!2.44e-26!173;UBERON:0002346!3.64e-26!90;UBERON:0004121!4.06e-25!169;UBERON:0003075!5.90e-25!86;UBERON:0007284!5.90e-25!86;UBERON:0003056!7.00e-25!61;UBERON:0000956!6.47e-23!25;UBERON:0000203!6.47e-23!25;UBERON:0001950!1.15e-20!20;UBERON:0000033!1.05e-18!123;UBERON:0002619!2.00e-18!22;UBERON:0000153!3.18e-17!129;UBERON:0007811!3.18e-17!129;UBERON:0002308!3.64e-11!9;UBERON:0000125!3.64e-11!9;UBERON:0000025!7.02e-10!194;UBERON:0001872!2.17e-09!5;UBERON:0002420!8.18e-09!9;UBERON:0007245!8.18e-09!9;UBERON:0010009!8.18e-09!9;UBERON:0010011!8.18e-09!9;UBERON:0000454!8.18e-09!9;UBERON:0009663!1.08e-08!7;UBERON:0000369!4.77e-08!4;UBERON:0002435!4.77e-08!4;UBERON:0000204!4.77e-08!4;UBERON:0010082!4.77e-08!4;UBERON:0000119!5.43e-08!312;UBERON:0000483!8.67e-08!309;UBERON:0001871!1.27e-07!7;UBERON:0000475!2.18e-07!365;UBERON:0007023!3.07e-07!115;UBERON:0000922!3.67e-07!612;UBERON:0000923!4.01e-07!604;UBERON:0005291!4.01e-07!604;UBERON:0006598!4.01e-07!604;UBERON:0002532!4.01e-07!604;UBERON:0002050!4.53e-07!605;UBERON:0005423!4.53e-07!605;UBERON:0000200!4.98e-07!6;UBERON:0000010!5.69e-07!8;UBERON:0002298!5.86e-07!8;UBERON:0000013!6.66e-07!5;UBERON:0002410!6.66e-07!5;UBERON:0000064!7.05e-07!219|ontology_enrichment_uberon_v019=UBERON:0000013;2.96e-20;5!UBERON:0002410;2.96e-20;5!UBERON:0000010;1.57e-11;8!UBERON:0000002;3.13e-08;6!UBERON:0001560;3.13e-08;6!UBERON:0001016;5.73e-07;83!UBERON:0001873;9.01e-07;2!UBERON:0006955;9.01e-07;2!UBERON:0004801;9.01e-07;2|ontology_enrichment_uberon_v019_2=UBERON:0000013,2.97e-20,5;UBERON:0002410,2.97e-20,5;UBERON:0001016,1.40e-18,89;UBERON:0001017,3.89e-12,81;UBERON:0000010,1.57e-11,8;UBERON:0004121,1.47e-10,171;UBERON:0000924,1.47e-10,171;UBERON:0006601,1.47e-10,171;UBERON:0000002,3.90e-08,6;UBERON:0001560,3.90e-08,6;UBERON:0011216,1.28e-07,223;UBERON:0001873,7.20e-07,2;UBERON:0010122,7.20e-07,2|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.672325146451775,0,0,0,0,0,0.313454721478088,0.85870796139317,0.547497700291537,0.502170558379211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130059347559878,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0.443458794925128,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.366403487860815,0,0,0,0,0,0,0,0,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0.149448680551801,0.352303495931295,0,0,0,0,0,0,0,0,0,0.336672227908132,0.125118519871964,0.277064115484183,0,0,0,0,0,0,0,0.300091096084402,0,0,0,0,0.194874010322397,0,0,0,0,0,0,0,0,0,0,0.265059536642971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.738155454624648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.380987365753014,0,0,0,0.205654985406647,0,0,0.112131084345361,0,0,0,0,0,0,0,0.257207374262142,0,0.266422179016099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.508189248444927,2.60279707715243,1.54657762555539,3.85287410269002,1.27587750330633,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=387104 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21494 | |||
|TSSclassifier=S | |||
|UniProt=A5PLQ8,Q5TF21 | |||
|association_with_transcript=47bp_to_ENST00000556132,NM_001012279,uc003qbd.2_5end | |||
|coexpression_cluster_id=C10 | |||
|description=CAGE_peak_17_at_C6orf174_5end | |||
|id=chr6:127840441..127840452,- | |||
|ontology_enrichment_celltype=CL:0000047!9.90e-15!8;CL:0002319!5.25e-14!25;CL:0000133!5.43e-12!59;CL:0000540!2.62e-11!6;CL:0000031!2.62e-11!6;CL:0000404!2.62e-11!6;CL:0000221!7.02e-10!71 | |||
|ontology_enrichment_celltype_v019=CL:0000333;2.96e-20;5!CL:0000540;3.60e-17;6!CL:0000404;3.60e-17;6!CL:0002319;2.00e-14;25!CL:0002321;3.98e-07;15!CL:0000123;5.89e-07;2!CL:0000242;5.89e-07;2!CL:0000047;6.42e-07;2!CL:0002535;9.01e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,1.93e-22,8;CL:0000540,3.31e-17,6;CL:0000031,3.31e-17,6;CL:0000404,3.31e-17,6;CL:0002319,1.91e-14,25;CL:0000133,1.54e-13,59;CL:0000221,5.78e-11,72;CL:0000242,6.07e-07,2 | |||
|ontology_enrichment_development_v019=CL:0000031;3.60e-17;6!CL:0000133;3.21e-07;59!UBERON:0010122;9.01e-07;2 | |||
|ontology_enrichment_disease=DOID:171!7.56e-09!10;DOID:169!1.38e-08!6 | |||
|ontology_enrichment_disease_v019=DOID:169;5.44e-17;6!DOID:171;1.96e-10;10!DOID:4362;1.06e-09;5 | |||
|ontology_enrichment_disease_v019_2=DOID:169,5.45e-17,6;DOID:171,1.96e-10,10;DOID:4362,1.38e-09,5 | |||
|ontology_enrichment_uberon=UBERON:0000073!1.06e-41!94;UBERON:0001016!1.06e-41!94;UBERON:0001017!2.87e-38!82;UBERON:0005743!8.04e-36!86;UBERON:0001049!1.81e-33!57;UBERON:0005068!1.81e-33!57;UBERON:0006241!1.81e-33!57;UBERON:0007135!1.81e-33!57;UBERON:0001893!9.97e-33!34;UBERON:0002020!1.32e-32!34;UBERON:0003528!1.32e-32!34;UBERON:0002791!2.36e-31!33;UBERON:0001869!2.66e-30!32;UBERON:0002780!4.44e-30!41;UBERON:0001890!4.44e-30!41;UBERON:0006240!4.44e-30!41;UBERON:0002616!5.45e-30!59;UBERON:0003080!3.72e-29!42;UBERON:0000955!5.15e-29!69;UBERON:0006238!5.15e-29!69;UBERON:0000924!2.44e-26!173;UBERON:0006601!2.44e-26!173;UBERON:0002346!3.64e-26!90;UBERON:0004121!4.06e-25!169;UBERON:0003075!5.90e-25!86;UBERON:0007284!5.90e-25!86;UBERON:0003056!7.00e-25!61;UBERON:0000956!6.47e-23!25;UBERON:0000203!6.47e-23!25;UBERON:0001950!1.15e-20!20;UBERON:0000033!1.05e-18!123;UBERON:0002619!2.00e-18!22;UBERON:0000153!3.18e-17!129;UBERON:0007811!3.18e-17!129;UBERON:0002308!3.64e-11!9;UBERON:0000125!3.64e-11!9;UBERON:0000025!7.02e-10!194;UBERON:0001872!2.17e-09!5;UBERON:0002420!8.18e-09!9;UBERON:0007245!8.18e-09!9;UBERON:0010009!8.18e-09!9;UBERON:0010011!8.18e-09!9;UBERON:0000454!8.18e-09!9;UBERON:0009663!1.08e-08!7;UBERON:0000369!4.77e-08!4;UBERON:0002435!4.77e-08!4;UBERON:0000204!4.77e-08!4;UBERON:0010082!4.77e-08!4;UBERON:0000119!5.43e-08!312;UBERON:0000483!8.67e-08!309;UBERON:0001871!1.27e-07!7;UBERON:0000475!2.18e-07!365;UBERON:0007023!3.07e-07!115;UBERON:0000922!3.67e-07!612;UBERON:0000923!4.01e-07!604;UBERON:0005291!4.01e-07!604;UBERON:0006598!4.01e-07!604;UBERON:0002532!4.01e-07!604;UBERON:0002050!4.53e-07!605;UBERON:0005423!4.53e-07!605;UBERON:0000200!4.98e-07!6;UBERON:0000010!5.69e-07!8;UBERON:0002298!5.86e-07!8;UBERON:0000013!6.66e-07!5;UBERON:0002410!6.66e-07!5;UBERON:0000064!7.05e-07!219 | |||
|ontology_enrichment_uberon_v019=UBERON:0000013;2.96e-20;5!UBERON:0002410;2.96e-20;5!UBERON:0000010;1.57e-11;8!UBERON:0000002;3.13e-08;6!UBERON:0001560;3.13e-08;6!UBERON:0001016;5.73e-07;83!UBERON:0001873;9.01e-07;2!UBERON:0006955;9.01e-07;2!UBERON:0004801;9.01e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000013,2.97e-20,5;UBERON:0002410,2.97e-20,5;UBERON:0001016,1.40e-18,89;UBERON:0001017,3.89e-12,81;UBERON:0000010,1.57e-11,8;UBERON:0004121,1.47e-10,171;UBERON:0000924,1.47e-10,171;UBERON:0006601,1.47e-10,171;UBERON:0000002,3.90e-08,6;UBERON:0001560,3.90e-08,6;UBERON:0011216,1.28e-07,223;UBERON:0001873,7.20e-07,2;UBERON:0010122,7.20e-07,2 | |||
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|short_description=p17@C6orf174 | |||
}} |
Revision as of 17:52, 13 September 2013
Short description: | p17@C6orf174 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_17_at_C6orf174_5end |
Coexpression cluster: | C10_occipital_temporal_parietal_brain_duodenum_Neurons_Neural |
Association with transcript: | 47bp_to_ENST00000556132, NM_001012279, uc003qbd.2_5end |
EntrezGene: | C6orf174 |
HGNC: | 21494 |
UniProt: | A5PLQ8Q5TF21 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 1.93e-22 | 8 |
neuron | 3.31e-17 | 6 |
neuroblast | 3.31e-17 | 6 |
electrically signaling cell | 3.31e-17 | 6 |
neural cell | 1.91e-14 | 25 |
neurectodermal cell | 1.54e-13 | 59 |
ectodermal cell | 5.78e-11 | 72 |
Merkel cell | 6.07e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
sympathetic nervous system | 2.97e-20 | 5 |
autonomic nervous system | 2.97e-20 | 5 |
nervous system | 1.40e-18 | 89 |
central nervous system | 3.89e-12 | 81 |
peripheral nervous system | 1.57e-11 | 8 |
ectoderm-derived structure | 1.47e-10 | 171 |
ectoderm | 1.47e-10 | 171 |
presumptive ectoderm | 1.47e-10 | 171 |
uterine cervix | 3.90e-08 | 6 |
neck of organ | 3.90e-08 | 6 |
organ system subdivision | 1.28e-07 | 223 |
caudate nucleus | 7.20e-07 | 2 |
future caudate nucleus | 7.20e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
neuroendocrine tumor | 5.45e-17 | 6 |
neuroectodermal tumor | 1.96e-10 | 10 |
cervical cancer | 1.38e-09 | 5 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.