FFCP PHASE1:Mm9::chr19:47036791..47036807,-: Difference between revisions
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{{FFCP | 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| ||
|EntrezGene=76952 | |||
|HGNC= | |||
|MCL_coexpression_id=3 | |||
|UniProt=Q3V1L4 | |||
|association_with_transcript=33bp_to_ENSMUST00000168536,NM_029810,NR_028353,uc008huh.2,uc008huj.2_5end | |||
|description=CAGE_peak_1_at_Nt5c2_5end | |||
|id=chr19:47036791..47036807,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000926!1.01e-13!193;UBERON:0004120!1.01e-13!193;UBERON:0006603!1.01e-13!193 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000926,4.11e-09,120;UBERON:0004120,4.11e-09,120;UBERON:0006603,4.11e-09,120;UBERON:0001048,1.50e-08,134;UBERON:0001041,7.50e-07,80 | |||
|phase1_expression=37.7951279167314,9.07336059862339,14.5599756604652,23.8946726932396,16.5295590882295,6.04365378882803,9.81173090501208,44.6766699107854,30.6919414290633,38.6206468431289,12.3276937122364,12.2849124852818,42.1153795630766,37.1536710280739,54.296891175953,62.9698081582359,86.7456728878902,56.4677275991245,63.3468683258513,65.7803960286947,41.9263420444774,49.34760274684,70.0015434892347,29.7585906395736,29.8232065387321,6.89078356938024,6.46142994238612,9.48073423817912,7.9809836171677,3.52842181663903,5.32153225572731,46.3572391625531,50.4353125819348,15.8481681015439,16.4645423258227,14.1299448554718,13.8835162258411,212.195536783612,154.704398215712,170.145216791484,309.997994192345,322.397468900386,195.660672271555,37.0136644848197,38.1177261385375,38.1777244496298,15.6478268869608,9.81113203712009,12.0827400503959,16.1376816231655,15.9584520652913,14.3752564364972,99.1595201801222,53.6767985088395,49.4057884739422,20.5807548828758,20.6304076755905,26.814948798427,28.3243045203437,40.7323054039465,35.494558596346,12.1984031544888,20.4537803105562,11.6986963246582,7.9109309005358,9.9467216092454,7.78960287347852,11.5265491596466,18.5604406032175,16.4707244764663,15.1433972172995,11.1403883917483,13.693849539,26.2130310320002,27.2201137691791,24.8189072384706,19.82085857989,39.8384494825786,31.1821262510174,29.278755876103,30.8313358940121,29.6920621217353,38.2480708631892,47.2720592426611,42.1723163863996,17.9723437138937,23.491327331852,24.0455285114638,9.23859558664845,14.1318817399689,69.5674772884027,18.9293252935905,77.5167320426836,21.0484244738749,16.2444104361917,32.2579358710082,36.6559936543872,33.4043432252993,23.1209544096553,31.8005617059306,37.6051930803737,26.9485602570067,10.1922095882658,7.11066703153331,99.8023699061697,107.424582961442,107.171182343134,32.314037960494,60.0735890061438,65.0176569103932,38.340257215316,58.7618373142433,50.5047938990768,68.7295240919959,72.4346435955942,43.9833069653864,48.4502136759373,55.8153517710859,73.4226758118396,43.5152826358531,45.9350358397619,68.8522859452015,93.1958806090611,51.2366394770208,34.7681533310335,17.1156226989756,75.3637133142238,71.9883277192089,68.3637821653088,48.0827952489481,43.4625572677695,25.7591421831372,27.638066910572,24.5486839037117,49.0379785160562,45.1030711328366,42.6706934532825,50.1360091558675,36.8975227313165,39.7735107625436,48.2746843391631,47.3598335132954,58.3401300569331,53.6509151495146,41.5703009814613,43.1743237359944,31.8585863503078,41.9099460597205,42.0357586219042,47.6547322022905,48.3865591450859,36.3864915829774,36.1461423993277,39.700746983527,36.217656007798,34.4329281595993,91.2877143507205,86.9835926047737,72.4616923458761,55.9239585845855,66.3708749746502,79.0472449813855,88.7792758444538,87.5600831275947,87.4694530071435,97.8967907399217,89.8715894688724,99.6008370391956,62.6973028170361,71.7411818025646,55.1267904911819,52.778195460545,51.3747269781058,56.0982830418354,35.3287113587734,29.7394329776132,81.2830206140143,40.7253872661858,41.1646323533002,43.1960209660416,33.3766724824222,26.6222252502812,20.6811580775729,18.4518857329182,21.353807769503,22.5637567971895,17.5934646160189,21.6862554524854,22.0309418444606,26.9645822596266,23.5590474363417,28.2780608021201,41.5372703087249,34.7315478333576,40.574784842309,45.2105947816598,40.7300223052014,43.2738008723266,45.5303067294652,51.8111619408404,56.8335394785777,52.3203975028434,35.870767877545,59.7305478463617,63.6851144166778,69.4823927269198,57.0036941101693,66.0825417721622,69.0036058327648,56.3884429403589,44.7493225899098,40.360527738648,74.7594673942244,51.3554507782535,40.8769351780074,32.8352541331245,27.9859965094183,39.0779252304327,43.9712592596519,41.8776020012771,48.7265279561657,40.9085656718203,50.6930936303165,61.3072902237046,52.845688276695,42.7342688808579,50.7585164021935,54.7017783432474,39.5447826270568,42.4405985113761,45.9342051763282,48.0234874490618,34.6819953060326,37.529492183491,47.2093702098275,42.7701956772335,53.6238970559225,40.7896669340867,24.262371915748,28.7816857012985,16.0909191902291,14.8366722832723,13.1408272617007,17.6836910484888,15.3731085116852,15.5692091933858,15.382806663646,21.6269334854371,16.9973744517005,52.3753745767545,56.7760340833075,31.3395462454369,45.7712355783549,71.2670931241353,31.8588332015911,41.0299275101919,32.3486205952284,34.1375194358176,35.7315290385735,38.4293934929909,33.5956781118688,35.989839218273,30.658774541086,28.4433082142234,17.9211634577498,16.5016869197099,60.938689429928,38.893196310763,30.2699320051646,30.0071849044229,46.2858009806334,41.9166721364866,39.6563139651112,40.1893732831271,46.4649981966147,47.4503838734957,14.1138174755176,31.4932743118227,52.1530098227775,25.9948706440352,23.3969794246147,20.3534715683876,24.7758711135373,51.9190845629427,56.3873906632914,30.1324827226305,54.0768019919558,78.5496465709561,72.9947176030274,57.1945433016307,115.585332395822,96.8464050079713,101.85338069386,77.3283200592242,44.7615430917307,5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| |||
|short_description=p1@Nt5c2 | |||
}} | |||
Revision as of 17:53, 13 September 2013
| Short description: | p1@Nt5c2 |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_1_at_Nt5c2_5end |
| Coexpression cluster: | MCL_coexpression_mm9:3 |
| Association with transcript: | 33bp_to_ENSMUST00000168536, NM_029810, NR_028353, uc008huh.2, uc008huj.2_5end |
| EntrezGene: | Nt5c2 |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| mesoderm | 4.11e-09 | 120 |
| mesoderm-derived structure | 4.11e-09 | 120 |
| presumptive mesoderm | 4.11e-09 | 120 |
| primordium | 1.50e-08 | 134 |
| foregut | 7.50e-07 | 80 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
