FFCP PHASE1:Mm9::chr1:55420306..55420319,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=75388|HGNC=|MCL_coexpression_id=0|UniProt=Q924M5,E9QPQ9|association_with_transcript=0bp_to_ENSMUST00000159398,NM_029267,uc007bal.1,uc007bam.1_5end|description=CAGE_peak_9_at_Boll_5end|id=chr1:55420306..55420319,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000991!7.50e-33!18;UBERON:0005564!7.50e-33!18;UBERON:0000473!8.37e-30!14;UBERON:0004176!2.63e-29!17;UBERON:0009196!2.63e-29!17;UBERON:0009117!2.63e-29!17;UBERON:0003135!1.02e-27!15;UBERON:0003101!6.83e-26!16;UBERON:0000079!6.83e-26!16;UBERON:0003133!3.70e-24!24;UBERON:0005156!3.77e-22!26;UBERON:0000990!3.77e-22!26;UBERON:0002323!5.64e-15!37;UBERON:0004458!5.64e-15!37;UBERON:0003886!1.58e-14!38;UBERON:0002553!4.19e-14!39;UBERON:0000464!5.20e-09!57|ontology_enrichment_uberon_v019_2=UBERON:0000473,1.41e-20,14;UBERON:0003135,2.93e-19,15;UBERON:0003101,4.18e-18,16;UBERON:0000079,4.18e-18,16;UBERON:0004176,4.37e-17,17;UBERON:0009196,4.37e-17,17;UBERON:0009117,4.37e-17,17;UBERON:0000991,3.52e-16,18;UBERON:0005564,3.52e-16,18;UBERON:0003133,2.57e-12,24;UBERON:0005156,2.02e-11,26;UBERON:0000990,2.02e-11,26;UBERON:0002323,3.25e-08,37;UBERON:0004458,3.25e-08,37;UBERON:0003886,5.17e-08,38;UBERON:0002553,8.01e-08,39|phase1_expression=0,0,0,0,0,0,0,0.129123323441576,0,0,0,0,0,0,0,0,0,0,0,0,2.38121212422995,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0.258937883647172,0,0,0,0,0,0.117588707135705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162886959353576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.5286305284206,0,0.165458490457098,0.777804753376191,0.129159823477731,0.337912250981556,0.117357238645754,0.911430693907651,1.57289016638566,9.66336483304024,9.21696020025169,0,0,0,0,0,0,0,0,0.100966449948148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147198920134397,0,0,0,0.145346416632329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p9@Boll}} | ||
|EntrezGene=75388 | |||
|HGNC= | |||
|MCL_coexpression_id=0 | |||
|UniProt=Q924M5,E9QPQ9 | |||
|association_with_transcript=0bp_to_ENSMUST00000159398,NM_029267,uc007bal.1,uc007bam.1_5end | |||
|description=CAGE_peak_9_at_Boll_5end | |||
|id=chr1:55420306..55420319,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000991!7.50e-33!18;UBERON:0005564!7.50e-33!18;UBERON:0000473!8.37e-30!14;UBERON:0004176!2.63e-29!17;UBERON:0009196!2.63e-29!17;UBERON:0009117!2.63e-29!17;UBERON:0003135!1.02e-27!15;UBERON:0003101!6.83e-26!16;UBERON:0000079!6.83e-26!16;UBERON:0003133!3.70e-24!24;UBERON:0005156!3.77e-22!26;UBERON:0000990!3.77e-22!26;UBERON:0002323!5.64e-15!37;UBERON:0004458!5.64e-15!37;UBERON:0003886!1.58e-14!38;UBERON:0002553!4.19e-14!39;UBERON:0000464!5.20e-09!57 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,1.41e-20,14;UBERON:0003135,2.93e-19,15;UBERON:0003101,4.18e-18,16;UBERON:0000079,4.18e-18,16;UBERON:0004176,4.37e-17,17;UBERON:0009196,4.37e-17,17;UBERON:0009117,4.37e-17,17;UBERON:0000991,3.52e-16,18;UBERON:0005564,3.52e-16,18;UBERON:0003133,2.57e-12,24;UBERON:0005156,2.02e-11,26;UBERON:0000990,2.02e-11,26;UBERON:0002323,3.25e-08,37;UBERON:0004458,3.25e-08,37;UBERON:0003886,5.17e-08,38;UBERON:0002553,8.01e-08,39 | |||
|phase1_expression=0,0,0,0,0,0,0,0.129123323441576,0,0,0,0,0,0,0,0,0,0,0,0,2.38121212422995,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0.258937883647172,0,0,0,0,0,0.117588707135705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162886959353576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.5286305284206,0,0.165458490457098,0.777804753376191,0.129159823477731,0.337912250981556,0.117357238645754,0.911430693907651,1.57289016638566,9.66336483304024,9.21696020025169,0,0,0,0,0,0,0,0,0.100966449948148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147198920134397,0,0,0,0.145346416632329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p9@Boll | |||
}} |
Revision as of 20:33, 13 September 2013
Short description: | p9@Boll |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_9_at_Boll_5end |
Coexpression cluster: | MCL_coexpression_mm9:0 |
Association with transcript: | 0bp_to_ENSMUST00000159398, NM_029267, uc007bal.1, uc007bam.1_5end |
EntrezGene: | Boll |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
testis | 1.41e-20 | 14 |
male reproductive organ | 2.93e-19 | 15 |
male organism | 4.18e-18 | 16 |
male reproductive system | 4.18e-18 | 16 |
external genitalia | 4.37e-17 | 17 |
indifferent external genitalia | 4.37e-17 | 17 |
indifferent gonad | 4.37e-17 | 17 |
gonad | 3.52e-16 | 18 |
gonad primordium | 3.52e-16 | 18 |
reproductive organ | 2.57e-12 | 24 |
reproductive structure | 2.02e-11 | 26 |
reproductive system | 2.02e-11 | 26 |
body cavity | 3.25e-08 | 37 |
body cavity or lining | 3.25e-08 | 37 |
body cavity precursor | 5.17e-08 | 38 |
anatomical cavity | 8.01e-08 | 39 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.