Personal tools

FFCP PHASE1:Mm9::chr2:110154391..110154403,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 1: Line 1:
{{FFCP
{{FFCP|EntrezGene=170442|HGNC=|MCL_coexpression_id=2280|UniProt=A2AGK3|association_with_transcript=313bp_to_ENSMUST00000133608_5end|description=CAGE_peak_9_at_Bbox1_5end|id=chr2:110154391..110154403,-|ontology_enrichment_celltype=CL:0000181!1.73e-07!5;CL:0000417!1.73e-07!5;CL:0000668!1.73e-07!5;CL:0000412!1.73e-07!5;CL:0000182!1.73e-07!5|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002365!1.68e-14!25;UBERON:0002330!1.68e-14!25;UBERON:0000014!1.06e-12!5;UBERON:0001003!1.06e-12!5;UBERON:0002097!1.06e-12!5;UBERON:0002199!1.06e-12!5;UBERON:0007029!1.06e-12!5;UBERON:0007376!1.06e-12!5;UBERON:0002416!1.06e-12!5;UBERON:0007383!1.06e-12!5;UBERON:0002107!3.75e-12!22;UBERON:0007499!3.75e-12!22;UBERON:0006925!3.75e-12!22;UBERON:0009497!3.75e-12!22;UBERON:0000015!3.75e-12!22;UBERON:0002423!3.75e-12!22;UBERON:0006235!3.75e-12!22;UBERON:0008835!3.75e-12!22;UBERON:0003894!3.75e-12!22;UBERON:0004161!3.75e-12!22;UBERON:0008836!3.75e-12!22;UBERON:0009854!1.67e-11!23;UBERON:0009856!1.67e-11!23|ontology_enrichment_uberon_v019_2=UBERON:0000014,5.45e-35,5;UBERON:0001003,5.45e-35,5;UBERON:0002097,5.45e-35,5;UBERON:0002199,5.45e-35,5;UBERON:0007029,5.45e-35,5;UBERON:0007376,5.45e-35,5;UBERON:0002416,5.45e-35,5;UBERON:0007383,5.45e-35,5;UBERON:0003102,8.74e-15,22;UBERON:0002365,9.26e-07,25;UBERON:0002330,9.26e-07,25|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261199789138935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153606533256243,0,0,0,0,0,0,0,0,0,0,0,0,0.860423876981386,0.679971333707751,2.69851595818909,0.649776417447669,0.896053774194671,0.702222100658759,0,0,0,0,0,0,0,0,0,0,1.25602267690966,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150704817835715,0,0,0,0,0,0,0,0,0,1.0447564995665,1.02891068203972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102904612379284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.85388415213294,0,0,0,0,0,0,0.287696137450811,0.162135226775035,0.274561413188081,0,0,0,0.757736633841335,1.07638448113147,3.37710464954357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.96705709207614,0.551873492609465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.95727007059552,3.87514624070173,2.0506394475573,3.46179797609096,4.26766339337159,0,0,0,0,0,0,0,0,0,0,0,0.954670618015114,0,0,0,0,0,0.404593039154462,0.495920734352016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974578807397524,0.0962118416403295,0.116876902181569,0,0,0,0,0.19318959403219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0,0,0,0,0,0,0.188626341386076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118635018124174,0,0,0,0,0.749431733813838,0.467863216890817,0.859484216193193,0.57386499620653,0.220591419119515,0.463735671240843|short_description=p9@Bbox1}}
|EntrezGene=170442
|HGNC=
|MCL_coexpression_id=2280
|UniProt=A2AGK3
|association_with_transcript=313bp_to_ENSMUST00000133608_5end
|description=CAGE_peak_9_at_Bbox1_5end
|id=chr2:110154391..110154403,-
|ontology_enrichment_celltype=CL:0000181!1.73e-07!5;CL:0000417!1.73e-07!5;CL:0000668!1.73e-07!5;CL:0000412!1.73e-07!5;CL:0000182!1.73e-07!5
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002365!1.68e-14!25;UBERON:0002330!1.68e-14!25;UBERON:0000014!1.06e-12!5;UBERON:0001003!1.06e-12!5;UBERON:0002097!1.06e-12!5;UBERON:0002199!1.06e-12!5;UBERON:0007029!1.06e-12!5;UBERON:0007376!1.06e-12!5;UBERON:0002416!1.06e-12!5;UBERON:0007383!1.06e-12!5;UBERON:0002107!3.75e-12!22;UBERON:0007499!3.75e-12!22;UBERON:0006925!3.75e-12!22;UBERON:0009497!3.75e-12!22;UBERON:0000015!3.75e-12!22;UBERON:0002423!3.75e-12!22;UBERON:0006235!3.75e-12!22;UBERON:0008835!3.75e-12!22;UBERON:0003894!3.75e-12!22;UBERON:0004161!3.75e-12!22;UBERON:0008836!3.75e-12!22;UBERON:0009854!1.67e-11!23;UBERON:0009856!1.67e-11!23
|ontology_enrichment_uberon_v019_2=UBERON:0000014,5.45e-35,5;UBERON:0001003,5.45e-35,5;UBERON:0002097,5.45e-35,5;UBERON:0002199,5.45e-35,5;UBERON:0007029,5.45e-35,5;UBERON:0007376,5.45e-35,5;UBERON:0002416,5.45e-35,5;UBERON:0007383,5.45e-35,5;UBERON:0003102,8.74e-15,22;UBERON:0002365,9.26e-07,25;UBERON:0002330,9.26e-07,25
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261199789138935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153606533256243,0,0,0,0,0,0,0,0,0,0,0,0,0.860423876981386,0.679971333707751,2.69851595818909,0.649776417447669,0.896053774194671,0.702222100658759,0,0,0,0,0,0,0,0,0,0,1.25602267690966,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150704817835715,0,0,0,0,0,0,0,0,0,1.0447564995665,1.02891068203972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102904612379284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.85388415213294,0,0,0,0,0,0,0.287696137450811,0.162135226775035,0.274561413188081,0,0,0,0.757736633841335,1.07638448113147,3.37710464954357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.96705709207614,0.551873492609465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.95727007059552,3.87514624070173,2.0506394475573,3.46179797609096,4.26766339337159,0,0,0,0,0,0,0,0,0,0,0,0.954670618015114,0,0,0,0,0,0.404593039154462,0.495920734352016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974578807397524,0.0962118416403295,0.116876902181569,0,0,0,0,0.19318959403219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0,0,0,0,0,0,0.188626341386076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118635018124174,0,0,0,0,0.749431733813838,0.467863216890817,0.859484216193193,0.57386499620653,0.220591419119515,0.463735671240843
|short_description=p9@Bbox1
}}

Revision as of 21:34, 13 September 2013

Short description:p9@Bbox1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_9_at_Bbox1_5end
Coexpression cluster:MCL_coexpression_mm9:2280
Association with transcript: 313bp_to_ENSMUST00000133608_5end
EntrezGene:Bbox1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression



0.0
1.0
2.0
3.0
4.0
5.0




  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr2:110154391..110154403,-&oldid=2976354"