FFCP PHASE1:Mm9::chr2:155660581..155660597,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=71405|HGNC=|MCL_coexpression_id=25|UniProt=A2ARK0|association_with_transcript=0bp_to_ENSMUST00000029143,NM_027788,uc008nlm.2_5end|description=CAGE_peak_1_at_Fam83c_5end|id=chr2:155660581..155660597,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003102!1.33e-07!23;UBERON:0000014!6.63e-07!5;UBERON:0001003!6.63e-07!5;UBERON:0002097!6.63e-07!5;UBERON:0002199!6.63e-07!5;UBERON:0007029!6.63e-07!5;UBERON:0007376!6.63e-07!5;UBERON:0002416!6.63e-07!5;UBERON:0007383!6.63e-07!5|ontology_enrichment_uberon_v019_2=UBERON:0003102,5.24e-13,22;UBERON:0000014,1.17e-12,5;UBERON:0001003,1.17e-12,5;UBERON:0002097,1.17e-12,5;UBERON:0002199,1.17e-12,5;UBERON:0007029,1.17e-12,5;UBERON:0007376,1.17e-12,5;UBERON:0002416,1.17e-12,5;UBERON:0007383,1.17e-12,5;UBERON:0000945,4.21e-08,16;UBERON:0010039,4.21e-08,16|phase1_expression=0,0,0.454999239389536,1.51232105653415,0,0.671517087647559,0.934450562382103,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,9.43955294481099,5.04700418347774,0,0.430761996159075,0.430942465371778,1.14014051673824,0.504060259519861,0.221730510655305,0,0,0,0.288851619751275,0.166234645358492,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.131886287730194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,0.68510327831436,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.72783522436244,0,0,0.255457055208591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130120442962704,0,0.900310649026746,0.30140963567143,0.0680364991513279,0.12811372028485,0.0937017245597288,0,0.431135985865684,0.189106080167819,0.527853372491847,1.53437012699302,5.56094498451196,6.61679116392116,7.61393904709391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330418782983798,0,0,0,0,0,0.22237804384487,0.190225626112559,0,0,0.251335208800269,1.39269530428806,0.779856348476481,1.79763881730844,1.08069024937347,0.398282546508734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179397413521912,0,0,0,0,0,0,0,0,0,0,0,0.159454768657487,1.14704320301017,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283880170416537,0,0,0,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,30.8337293000568,11.7869031488011,27.5026937672391,70.4296829618505,90.9340584587639,0,0,0,0.412773735926445,0,0,0,0,0,0,0,18.1387417422872,0,3.45643094115643,6.15630442684267,8.99079672862215,8.51613998610093,9.71023293970709,13.4725132832298,14.1348208671376,0,0,0,0,0,0,0.129159823477731,0,0.117357238645754,0.13020438484395,0,0,0,0,0,0,0.129920822977795,0,0,0,0,0.201932899896295,0,0,0.0974578807397524,0,0,27.6611068010558,0,0,0,2.31827512838629,0,0.73260649706906,26.5816790058042,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.18796045361465,0.419226325255965,0.919217542250071,0.222246727801615,1.44224540067226,0.320919209591815,1.51618327058278,0.50695859978048,0.565879024158229,0.280924522409647,0.512201219238954,0.746661096422973,0.476293691283074,0.579421629724277,0.578727661391115,1.23625770240992,0.147198920134397,2.05721551431249,0.887379030796687,1.1921809497366,0.581385666529314,0.564656282491984,1.01537529470012,0.548783918618318,1.05227884575137,0.679020569229309,0.561142271657738,0.593175090620871,0.985044823755635,1.63692417267876,0.77468420592983,1.35034627686799,4.24677982494508,3.04111090979031,3.86767897286937,0.57386499620653,5.95596831622692,0.463735671240843|short_description=p1@Fam83c}} | ||
|EntrezGene=71405 | |||
|HGNC= | |||
|MCL_coexpression_id=25 | |||
|UniProt=A2ARK0 | |||
|association_with_transcript=0bp_to_ENSMUST00000029143,NM_027788,uc008nlm.2_5end | |||
|description=CAGE_peak_1_at_Fam83c_5end | |||
|id=chr2:155660581..155660597,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003102!1.33e-07!23;UBERON:0000014!6.63e-07!5;UBERON:0001003!6.63e-07!5;UBERON:0002097!6.63e-07!5;UBERON:0002199!6.63e-07!5;UBERON:0007029!6.63e-07!5;UBERON:0007376!6.63e-07!5;UBERON:0002416!6.63e-07!5;UBERON:0007383!6.63e-07!5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003102,5.24e-13,22;UBERON:0000014,1.17e-12,5;UBERON:0001003,1.17e-12,5;UBERON:0002097,1.17e-12,5;UBERON:0002199,1.17e-12,5;UBERON:0007029,1.17e-12,5;UBERON:0007376,1.17e-12,5;UBERON:0002416,1.17e-12,5;UBERON:0007383,1.17e-12,5;UBERON:0000945,4.21e-08,16;UBERON:0010039,4.21e-08,16 | |||
|phase1_expression=0,0,0.454999239389536,1.51232105653415,0,0.671517087647559,0.934450562382103,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,9.43955294481099,5.04700418347774,0,0.430761996159075,0.430942465371778,1.14014051673824,0.504060259519861,0.221730510655305,0,0,0,0.288851619751275,0.166234645358492,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.131886287730194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,0.68510327831436,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.72783522436244,0,0,0.255457055208591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130120442962704,0,0.900310649026746,0.30140963567143,0.0680364991513279,0.12811372028485,0.0937017245597288,0,0.431135985865684,0.189106080167819,0.527853372491847,1.53437012699302,5.56094498451196,6.61679116392116,7.61393904709391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330418782983798,0,0,0,0,0,0.22237804384487,0.190225626112559,0,0,0.251335208800269,1.39269530428806,0.779856348476481,1.79763881730844,1.08069024937347,0.398282546508734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179397413521912,0,0,0,0,0,0,0,0,0,0,0,0.159454768657487,1.14704320301017,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283880170416537,0,0,0,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,30.8337293000568,11.7869031488011,27.5026937672391,70.4296829618505,90.9340584587639,0,0,0,0.412773735926445,0,0,0,0,0,0,0,18.1387417422872,0,3.45643094115643,6.15630442684267,8.99079672862215,8.51613998610093,9.71023293970709,13.4725132832298,14.1348208671376,0,0,0,0,0,0,0.129159823477731,0,0.117357238645754,0.13020438484395,0,0,0,0,0,0,0.129920822977795,0,0,0,0,0.201932899896295,0,0,0.0974578807397524,0,0,27.6611068010558,0,0,0,2.31827512838629,0,0.73260649706906,26.5816790058042,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.18796045361465,0.419226325255965,0.919217542250071,0.222246727801615,1.44224540067226,0.320919209591815,1.51618327058278,0.50695859978048,0.565879024158229,0.280924522409647,0.512201219238954,0.746661096422973,0.476293691283074,0.579421629724277,0.578727661391115,1.23625770240992,0.147198920134397,2.05721551431249,0.887379030796687,1.1921809497366,0.581385666529314,0.564656282491984,1.01537529470012,0.548783918618318,1.05227884575137,0.679020569229309,0.561142271657738,0.593175090620871,0.985044823755635,1.63692417267876,0.77468420592983,1.35034627686799,4.24677982494508,3.04111090979031,3.86767897286937,0.57386499620653,5.95596831622692,0.463735671240843 | |||
|short_description=p1@Fam83c | |||
}} |
Revision as of 22:34, 13 September 2013
Short description: | p1@Fam83c |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Fam83c_5end |
Coexpression cluster: | MCL_coexpression_mm9:25 |
Association with transcript: | 0bp_to_ENSMUST00000029143, NM_027788, uc008nlm.2_5end |
EntrezGene: | Fam83c |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
surface structure | 5.24e-13 | 22 |
zone of skin | 1.17e-12 | 5 |
skin epidermis | 1.17e-12 | 5 |
skin of body | 1.17e-12 | 5 |
integument | 1.17e-12 | 5 |
surface | 1.17e-12 | 5 |
outer epithelium | 1.17e-12 | 5 |
integumental system | 1.17e-12 | 5 |
enveloping layer of ectoderm | 1.17e-12 | 5 |
stomach | 4.21e-08 | 16 |
food storage organ | 4.21e-08 | 16 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.