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FFCP PHASE1:Mm9::chr2:79095574..79095589,+: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=16401|HGNC=|MCL_coexpression_id=599|UniProt=E9QK91,Q00651,Q792F9,Q8BQ25|association_with_transcript=0bp_to_ENSMUST00000028395,ENSMUST00000155105,NM_010576,uc008kgo.1,uc008kgp.1,uc008kgq.1,uc008kgr.1_5end|description=CAGE_peak_4_at_Itga4_5end|id=chr2:79095574..79095589,+|ontology_enrichment_celltype=CL:0000988!2.89e-08!32;CL:0002032!2.89e-08!32;CL:0000037!2.89e-08!32;CL:0000566!2.89e-08!32;CL:0000837!2.89e-08!32;CL:0002031!2.36e-07!25|ontology_enrichment_celltype_v019_2=CL:0002031,1.20e-08,25;CL:0000988,3.25e-08,32;CL:0002032,3.25e-08,32;CL:0000037,3.25e-08,32;CL:0000837,3.25e-08,32;CL:0000542,7.43e-07,13;CL:0000051,7.43e-07,13;CL:0000838,8.76e-07,12|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002193!3.87e-11!48;UBERON:0002405!4.05e-11!70;UBERON:0002390!6.75e-11!45;UBERON:0003061!6.75e-11!45;UBERON:0004177!6.06e-10!29;UBERON:0005057!3.57e-09!51;UBERON:0002370!9.55e-07!23;UBERON:0000974!9.55e-07!23;UBERON:0004807!9.55e-07!23;UBERON:0005058!9.55e-07!23;UBERON:0003351!9.55e-07!23;UBERON:0009113!9.55e-07!23;UBERON:0003295!9.55e-07!23;UBERON:0009722!9.55e-07!23;UBERON:0005562!9.55e-07!23;UBERON:0007690!9.55e-07!23|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.47e-13,45;UBERON:0003061,1.47e-13,45;UBERON:0004177,2.54e-13,29;UBERON:0005057,2.54e-13,29;UBERON:0002193,4.27e-13,48;UBERON:0002405,4.27e-13,48;UBERON:0000077,1.88e-09,35;UBERON:0002370,6.00e-09,23;UBERON:0000974,6.00e-09,23;UBERON:0004807,6.00e-09,23;UBERON:0005058,6.00e-09,23;UBERON:0003351,6.00e-09,23;UBERON:0009113,6.00e-09,23;UBERON:0003295,6.00e-09,23;UBERON:0009722,6.00e-09,23;UBERON:0005562,6.00e-09,23;UBERON:0007690,6.00e-09,23;UBERON:0006562,2.64e-08,24;UBERON:0003408,2.64e-08,24;UBERON:0001557,2.64e-08,24;UBERON:0001042,2.64e-08,24;UBERON:0008814,2.64e-08,24;UBERON:0009145,2.64e-08,24;UBERON:0001041,1.48e-07,80|phase1_expression=0,0,0,0,0,0,0,26.9867745992894,3.23814060948833,2.10658073689794,0.68487187290202,0.239316476986009,23.283299270644,18.1834437031515,17.6548173762301,24.2970320867791,32.8794082720229,11.987562283613,10.5578113876419,9.33657233955666,0.680346321208558,10.3262589248921,9.14199261986274,0.47997726838022,0.45881856213434,0,0,0,0.570070258369122,0.504060259519861,0.443461021310609,0.635030673459631,0.61506478758457,0,0,0,0,2.09265815368454,2.3440060335714,1.0470474879476,0.588231488031014,0.683045484958446,0,0,0,0,0,0,0.219686182734472,0.194429899074283,0,0,5.36904339384756,16.6833292662609,19.4934403502629,0,0,0,0,0,0.633831403506179,0,0,0,0,0.7104801149461,0,0,0.311068836925433,0,0,0,0,0.367472397644862,0,0,0,0,0,0,0,0,0,0,0,0.294628585473668,0.284743361598206,0,0.151452386666368,0.604572480854284,0.289864488701678,0,0,0,0,0,1.96622188184453,0,0,0,0.422530259330042,0,0,0,0,0,0,0.91347103775248,8.2860122767095,0.890652834388949,1.04091196059682,1.21786191324856,1.38369298353635,0.452167921657868,0.587943535678524,0,0,0.86759614151947,6.19227386364912,2.58826959915855,10.1587098491781,10.1823803158397,0,0,0,0.510914110417183,2.87556298814209,1.19980546198682,2.41433431438823,0,0,0,0.173824320192276,0,0,0.162241263067758,0.81471491080253,6.09594155989456,0,0,0.520481771850815,0,0.360124259610698,1.35634336052144,0.204109497453984,0.2562274405697,0.187403449119458,0,0.431135985865684,0.756424320671277,1.05570674498369,0.219195732427575,0.278047249225598,0,1.23469281844766,0.398068533636986,0.702213187313235,0.772043721344145,0.852490498186778,1.86413195281952,1.40715635988658,0.540186184383045,0.23674473558521,0.196764231747404,0.154267112887378,0.232533944750408,0,0.116765342367169,0,0,0.162137619091711,0.292399974850665,0.439100230582101,0.268412837520744,0.210289948564127,0,0.330418782983798,0.264450566663544,1.06644125267617,2.32236671860439,1.15980715189884,0.201683524623343,0,0.380451252225118,0.474529061544512,0,0,0.198956472041151,0.58489226135736,0.898819408654221,0,0.398282546508734,0.189667900953082,1.25673363870702,0,0.203651327845314,0.193952487167626,0.350679099451593,0.569128834118316,0,0,0.246794327843601,0,18.8534969459186,19.8524585064335,18.2138311031732,25.3575151735629,22.6706530167272,15.0229252551038,13.8094145976389,6.16113861745134,5.49122826376163,4.31304619582064,0.372140947668503,0.312037673114561,0.505157755894224,0.358794827043824,0,4.24932337383191,1.70542270593436,0.325929952884052,0,0.234690248288502,0.670025029767263,0.952174563544055,0.390267295715598,0.788175720530955,1.32878813789265,2.23236676120482,2.13022309130459,2.59027472798843,1.88043776155965,3.01582567878545,2.17562273527484,0,0.551873492609465,0.160550589987792,0.117211686592203,0,1.00988370881749,1.26203287766503,1.95219372148319,0.215423397732799,3.82350076724083,1.55959071857676,1.69845918473299,1.61924280669958,2.33804686329049,0.395287777946524,0,0.141940085208269,0.178065603667255,0.325773918707152,0.329940245945071,1.32745138339963,0.971122544619926,0.302323556964751,0,0.295301892880773,0,0.516856586336442,0,0.356497378384721,0.632073515871632,1.05418608574999,0,0,0.720244376125241,0.129358683782755,0,0,0,0,0,0,0,0,0.16488625294148,1.13025098687134,0.542816324353403,0.119372344003136,0.164140899745061,0.582961673259701,0,14.5240248678175,2.27025554759545,9.25972636848558,27.3134262656802,28.5690935936943,16.4720284708696,1.69978429993855,3.91864066506242,3.31679937130617,0,0.316335993581135,0.813277868507395,0.756037385752609,0.627264888043406,0,0.404593039154462,0.578574190077352,0.26175594198403,0.129614973291793,0,0,0.747582730219894,1.15820943319968,0.194451188344048,0.774958940866387,1.01373675294467,0.938857909166032,0.5208175393758,0.104859344425711,0,0,5.68820017130721,4.66267995167378,9.44940805916411,8.70469513951227,6.80301443536429,6.15912199821921,6.49055427407832,7.38447635872886,6.15895344683701,7.69688747215498,3.7305688500631,4.58052039476836,7.40831180630537,7.36324483743884,0.226730383615211,0,0,0,0.386379188064381,0.187682475451182,0.183151624267265,0.428736758158132,0,0.564751842617067,0,0,0.171853182343688,0.685082519770642,0,0,0.45032120322422,0,0,0.31136204275253,1.99512436700516,4.43907374960749,4.132814190161,1.88651846365184,0.919217542250071,1.11123363900808,2.26638562962784,2.24643446714271,1.01078884705519,1.01391719956096,2.45214243801899,1.40462261204824,2.62503124859964,2.01024141344646,1.42888107384922,1.62238056322798,1.54327376370964,2.88460130562315,0.883193520806384,1.71434626192708,2.48466128623072,1.43061713968393,1.16277133305863,1.69396884747595,1.77690676572521,1.46342378298218,1.57841826862706,2.8518863907631,1.68342681497322,1.30498519936592,2.36410757701352,2.86461730218783,3.09873682371932,1.73615949883027,0.999242311751784,1.63752125911786,0.214871054048298,0.57386499620653,1.98532277207564,1.85494268496337|short_description=p4@Itga4}}
|EntrezGene=16401
|HGNC=
|MCL_coexpression_id=599
|UniProt=E9QK91,Q00651,Q792F9,Q8BQ25
|association_with_transcript=0bp_to_ENSMUST00000028395,ENSMUST00000155105,NM_010576,uc008kgo.1,uc008kgp.1,uc008kgq.1,uc008kgr.1_5end
|description=CAGE_peak_4_at_Itga4_5end
|id=chr2:79095574..79095589,+
|ontology_enrichment_celltype=CL:0000988!2.89e-08!32;CL:0002032!2.89e-08!32;CL:0000037!2.89e-08!32;CL:0000566!2.89e-08!32;CL:0000837!2.89e-08!32;CL:0002031!2.36e-07!25
|ontology_enrichment_celltype_v019_2=CL:0002031,1.20e-08,25;CL:0000988,3.25e-08,32;CL:0002032,3.25e-08,32;CL:0000037,3.25e-08,32;CL:0000837,3.25e-08,32;CL:0000542,7.43e-07,13;CL:0000051,7.43e-07,13;CL:0000838,8.76e-07,12
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002193!3.87e-11!48;UBERON:0002405!4.05e-11!70;UBERON:0002390!6.75e-11!45;UBERON:0003061!6.75e-11!45;UBERON:0004177!6.06e-10!29;UBERON:0005057!3.57e-09!51;UBERON:0002370!9.55e-07!23;UBERON:0000974!9.55e-07!23;UBERON:0004807!9.55e-07!23;UBERON:0005058!9.55e-07!23;UBERON:0003351!9.55e-07!23;UBERON:0009113!9.55e-07!23;UBERON:0003295!9.55e-07!23;UBERON:0009722!9.55e-07!23;UBERON:0005562!9.55e-07!23;UBERON:0007690!9.55e-07!23
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.47e-13,45;UBERON:0003061,1.47e-13,45;UBERON:0004177,2.54e-13,29;UBERON:0005057,2.54e-13,29;UBERON:0002193,4.27e-13,48;UBERON:0002405,4.27e-13,48;UBERON:0000077,1.88e-09,35;UBERON:0002370,6.00e-09,23;UBERON:0000974,6.00e-09,23;UBERON:0004807,6.00e-09,23;UBERON:0005058,6.00e-09,23;UBERON:0003351,6.00e-09,23;UBERON:0009113,6.00e-09,23;UBERON:0003295,6.00e-09,23;UBERON:0009722,6.00e-09,23;UBERON:0005562,6.00e-09,23;UBERON:0007690,6.00e-09,23;UBERON:0006562,2.64e-08,24;UBERON:0003408,2.64e-08,24;UBERON:0001557,2.64e-08,24;UBERON:0001042,2.64e-08,24;UBERON:0008814,2.64e-08,24;UBERON:0009145,2.64e-08,24;UBERON:0001041,1.48e-07,80
|phase1_expression=0,0,0,0,0,0,0,26.9867745992894,3.23814060948833,2.10658073689794,0.68487187290202,0.239316476986009,23.283299270644,18.1834437031515,17.6548173762301,24.2970320867791,32.8794082720229,11.987562283613,10.5578113876419,9.33657233955666,0.680346321208558,10.3262589248921,9.14199261986274,0.47997726838022,0.45881856213434,0,0,0,0.570070258369122,0.504060259519861,0.443461021310609,0.635030673459631,0.61506478758457,0,0,0,0,2.09265815368454,2.3440060335714,1.0470474879476,0.588231488031014,0.683045484958446,0,0,0,0,0,0,0.219686182734472,0.194429899074283,0,0,5.36904339384756,16.6833292662609,19.4934403502629,0,0,0,0,0,0.633831403506179,0,0,0,0,0.7104801149461,0,0,0.311068836925433,0,0,0,0,0.367472397644862,0,0,0,0,0,0,0,0,0,0,0,0.294628585473668,0.284743361598206,0,0.151452386666368,0.604572480854284,0.289864488701678,0,0,0,0,0,1.96622188184453,0,0,0,0.422530259330042,0,0,0,0,0,0,0.91347103775248,8.2860122767095,0.890652834388949,1.04091196059682,1.21786191324856,1.38369298353635,0.452167921657868,0.587943535678524,0,0,0.86759614151947,6.19227386364912,2.58826959915855,10.1587098491781,10.1823803158397,0,0,0,0.510914110417183,2.87556298814209,1.19980546198682,2.41433431438823,0,0,0,0.173824320192276,0,0,0.162241263067758,0.81471491080253,6.09594155989456,0,0,0.520481771850815,0,0.360124259610698,1.35634336052144,0.204109497453984,0.2562274405697,0.187403449119458,0,0.431135985865684,0.756424320671277,1.05570674498369,0.219195732427575,0.278047249225598,0,1.23469281844766,0.398068533636986,0.702213187313235,0.772043721344145,0.852490498186778,1.86413195281952,1.40715635988658,0.540186184383045,0.23674473558521,0.196764231747404,0.154267112887378,0.232533944750408,0,0.116765342367169,0,0,0.162137619091711,0.292399974850665,0.439100230582101,0.268412837520744,0.210289948564127,0,0.330418782983798,0.264450566663544,1.06644125267617,2.32236671860439,1.15980715189884,0.201683524623343,0,0.380451252225118,0.474529061544512,0,0,0.198956472041151,0.58489226135736,0.898819408654221,0,0.398282546508734,0.189667900953082,1.25673363870702,0,0.203651327845314,0.193952487167626,0.350679099451593,0.569128834118316,0,0,0.246794327843601,0,18.8534969459186,19.8524585064335,18.2138311031732,25.3575151735629,22.6706530167272,15.0229252551038,13.8094145976389,6.16113861745134,5.49122826376163,4.31304619582064,0.372140947668503,0.312037673114561,0.505157755894224,0.358794827043824,0,4.24932337383191,1.70542270593436,0.325929952884052,0,0.234690248288502,0.670025029767263,0.952174563544055,0.390267295715598,0.788175720530955,1.32878813789265,2.23236676120482,2.13022309130459,2.59027472798843,1.88043776155965,3.01582567878545,2.17562273527484,0,0.551873492609465,0.160550589987792,0.117211686592203,0,1.00988370881749,1.26203287766503,1.95219372148319,0.215423397732799,3.82350076724083,1.55959071857676,1.69845918473299,1.61924280669958,2.33804686329049,0.395287777946524,0,0.141940085208269,0.178065603667255,0.325773918707152,0.329940245945071,1.32745138339963,0.971122544619926,0.302323556964751,0,0.295301892880773,0,0.516856586336442,0,0.356497378384721,0.632073515871632,1.05418608574999,0,0,0.720244376125241,0.129358683782755,0,0,0,0,0,0,0,0,0.16488625294148,1.13025098687134,0.542816324353403,0.119372344003136,0.164140899745061,0.582961673259701,0,14.5240248678175,2.27025554759545,9.25972636848558,27.3134262656802,28.5690935936943,16.4720284708696,1.69978429993855,3.91864066506242,3.31679937130617,0,0.316335993581135,0.813277868507395,0.756037385752609,0.627264888043406,0,0.404593039154462,0.578574190077352,0.26175594198403,0.129614973291793,0,0,0.747582730219894,1.15820943319968,0.194451188344048,0.774958940866387,1.01373675294467,0.938857909166032,0.5208175393758,0.104859344425711,0,0,5.68820017130721,4.66267995167378,9.44940805916411,8.70469513951227,6.80301443536429,6.15912199821921,6.49055427407832,7.38447635872886,6.15895344683701,7.69688747215498,3.7305688500631,4.58052039476836,7.40831180630537,7.36324483743884,0.226730383615211,0,0,0,0.386379188064381,0.187682475451182,0.183151624267265,0.428736758158132,0,0.564751842617067,0,0,0.171853182343688,0.685082519770642,0,0,0.45032120322422,0,0,0.31136204275253,1.99512436700516,4.43907374960749,4.132814190161,1.88651846365184,0.919217542250071,1.11123363900808,2.26638562962784,2.24643446714271,1.01078884705519,1.01391719956096,2.45214243801899,1.40462261204824,2.62503124859964,2.01024141344646,1.42888107384922,1.62238056322798,1.54327376370964,2.88460130562315,0.883193520806384,1.71434626192708,2.48466128623072,1.43061713968393,1.16277133305863,1.69396884747595,1.77690676572521,1.46342378298218,1.57841826862706,2.8518863907631,1.68342681497322,1.30498519936592,2.36410757701352,2.86461730218783,3.09873682371932,1.73615949883027,0.999242311751784,1.63752125911786,0.214871054048298,0.57386499620653,1.98532277207564,1.85494268496337
|short_description=p4@Itga4
}}

Revision as of 00:42, 14 September 2013

Short description:p4@Itga4
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_4_at_Itga4_5end
Coexpression cluster:MCL_coexpression_mm9:599
Association with transcript: 0bp_to_ENSMUST00000028395, ENSMUST00000155105, NM_010576, uc008kgo.1, uc008kgp.1, uc008kgq.1, uc008kgr.1_5end
EntrezGene:Itga4
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p4@Itga4

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E926.99
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E73.24
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F22.11
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.68
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.24
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E423.28
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E818.18
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A117.65
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A324.30
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A532.88
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A211.99
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A410.56
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A69.34
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.68
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H210.33
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I99.14
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.48
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.46
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.57
Ileum epithelium, pool2.CNhs13232.10253-104C10.50
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.44
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.64
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.62
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G82.09
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H12.34
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H31.05
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.59
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.68
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.22
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.19
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A25.37
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I916.68
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A119.49
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.63
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.71
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.31
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.00
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.37
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.00
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.00
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.00
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.00
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.29
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.28
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.00
Mouse Schwann, donor1.CNhs12507.11728-123D90.15
Mouse Schwann, donor2.CNhs12573.11746-123F90.60
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.29
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.97
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.42
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.91
accessory axillary lymph node, adult.CNhs10475.1063-29H98.29
adrenal gland, adult.CNhs10508.49-24D70.89
adrenal gland, embryo E14.CNhs11038.406-44C51.04
adrenal gland, embryo E16.CNhs11004.1254-43D61.22
adrenal gland, embryo E17.CNhs11043.1263-45I11.38
adrenal gland, embryo E18.CNhs11026.1262-18F50.45
adrenal gland, neonate N00.CNhs11191.1311-23C10.59
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.87
bone (os femoris), adult.CNhs10483.56-12G26.19
bone (os femoris), neonate N02.CNhs11227.1985-43F52.59
bone (os femoris), neonate N16.CNhs11225.1525-43A610.16
bone (os femoris), neonate N20.CNhs11195.1350-25C310.18
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.00
colon, adult.CNhs10468.36-18H70.51
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C72.88
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D11.20
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D42.41
corpora quadrigemina, adult.CNhs10501.16-22A40.00
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.00
cortex, adult.CNhs10473.12-14D50.17
cortex, neonate N30.CNhs11107.1392-42F20.00
diencephalon, adult.CNhs10482.20-12F20.00
diencephalon, neonate N30.CNhs11201.1388-42B20.16
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.81
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A26.10
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.00
eyeball, embryo E12.CNhs11016.345-16C60.52
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.36
eyeball, embryo E17.CNhs11023.1261-18D41.36
eyeball, neonate N00.CNhs11207.633-15C60.20
eyeball, neonate N01.CNhs11140.1532-43E70.26
eyeball, neonate N02.CNhs11205.1551-44G80.19
eyeball, neonate N16.CNhs11188.777-19A20.00
forelimb, embryo E11.CNhs10596.335-25E20.43
forelimb, embryo E12.CNhs10600.359-14H20.76
forelimb, embryo E13.CNhs10589.384-1E21.06
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B51.23
gonad, embryo E13.CNhs11044.1564-45I60.40
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.70
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.77
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.85
heart, embryo E11.CNhs10586.331-24E91.86
heart, embryo E12.CNhs11015.353-12F51.41
heart, embryo E13.CNhs11013.376-3I90.54
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C60.15
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.12
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.16
heart, neonate N20.CNhs11127.821-26I60.29
heart, neonate N25.CNhs11196.1351-25D30.44
heart, neonate N30.CNhs11202.1390-42D20.27
hippocampus, adult.CNhs10478.13-16E80.21
hippocampus, neonate N00.CNhs11228.627-43G10.00
intestinal mucosa, adult.CNhs10506.860-29I30.33
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I51.07
intestine, embryo E13.CNhs11010.381-16D52.32
intestine, embryo E15.CNhs10602.976-16D81.16
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.38
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.58
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.40
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F81.26
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.35
kidney, neonate N10.CNhs11206.758-6D50.57
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.25
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F818.85
liver, embryo E13.CNhs10524.378-3H619.85
liver, embryo E14.CNhs10594.409-16E118.21
liver, embryo E15.CNhs10520.433-16D725.36
liver, embryo E16.CNhs10523.462-17F522.67
liver, embryo E17.CNhs10510.481-18A315.02
liver, embryo E18.CNhs10579.499-43G413.81
liver, neonate N00.CNhs11117.641-24F46.16
liver, neonate N03.CNhs11123.1345-25G25.49
liver, neonate N06.CNhs11101.684-20A84.31
liver, neonate N07.CNhs11103.716-20H20.37
liver, neonate N10.CNhs11115.751-24B90.31
liver, neonate N20.CNhs11220.823-25A30.51
liver, neonate N25.CNhs11198.1368-26H10.36
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B14.25
lung, embryo E12.CNhs10522.354-16G21.71
lung, embryo E14.CNhs10604.404-26F80.33
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A60.67
lung, embryo E18.CNhs10583.1287-20I60.95
lung, neonate N00.CNhs11224.640-42C60.39
lung, neonate N06.CNhs11212.683-20E50.79
lung, neonate N07.CNhs11111.715-19A31.33
lung, neonate N10.CNhs11219.750-23E62.23
lung, neonate N20.CNhs11109.822-18A42.13
lung, neonate N25.CNhs11119.1359-25C72.59
lung, neonate N30.CNhs11133.1394-42H21.88
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A13.02
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A12.18
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.55
medulla oblongata, adult.CNhs10477.17-12C20.16
medulla oblongata, neonate N30.CNhs11200.1396-42A30.12
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C21.01
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E11.26
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.95
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.22
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D73.82
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D81.56
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D91.70
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D41.62
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D52.34
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I70.14
ovary, embryo E18.CNhs11040.505-44H70.18
ovary, neonate N00.CNhs11217.1299-22I40.33
oviduct, adult pregnant day01.CNhs10500.988-6G60.33
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F40.97
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.52
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.63
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.72
pituitary gland, embryo E13.CNhs11009.370-44C70.13
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.00
pituitary gland, embryo E16.CNhs11036.449-43F60.00
pituitary gland, embryo E17.CNhs11039.1265-44F50.00
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.16
skin, neonate N00.CNhs11124.650-25G41.13
skin, neonate N03.CNhs11215.662-22H30.54
skin, neonate N06.CNhs11097.693-20I50.12
skin, neonate N10.CNhs11108.762-6C40.16
small intestine, neonate N16.CNhs11114.790-21I10.58
spinal cord, adult.CNhs10505.24-13C90.00
spleen, adult.CNhs10465.25-2G214.52
spleen, embryo E16.CNhs11035.461-43C12.27
spleen, embryo E18.CNhs11011.1271-21F29.26
spleen, neonate N10.CNhs11116.752-24D127.31
spleen, neonate N20.CNhs11112.824-19H128.57
spleen, neonate N25.CNhs11099.1354-25G316.47
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C61.70
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C93.92
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D33.32
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.32
stomach, embryo E15.CNhs10603.1252-16G80.81
stomach, embryo E16.CNhs11022.459-17D40.76
stomach, embryo E17.CNhs11006.1035-18D50.63
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.40
stomach, neonate N07.CNhs11210.718-18A90.58
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I10.13
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.75
testis, embryo E15.CNhs11034.443-27C51.16
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I50.77
testis, embryo E18.CNhs11027.503-18G51.01
testis, neonate N00.CNhs11189.1300-22B70.94
testis, neonate N07.CNhs11222.726-26I40.52
testis, neonate N10.CNhs11204.763-44D90.10
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B55.69
thymus, embryo E14.CNhs11041.402-44I44.66
thymus, embryo E15.CNhs11005.430-45I29.45
thymus, embryo E16.CNhs11002.456-26C58.70
thymus, embryo E17.CNhs10581.478-18C16.80
thymus, embryo E18.CNhs10595.1273-19G46.16
thymus, neonate N02.CNhs11181.1541-43F86.49
thymus, neonate N03.CNhs11137.2104-43C77.38
thymus, neonate N06.CNhs11197.681-26C46.16
thymus, neonate N07.CNhs11211.713-19D37.70
thymus, neonate N10.CNhs11194.748-24E43.73
thymus, neonate N20.CNhs11186.820-7A24.58
thymus, neonate N25.CNhs11125.1362-25G77.41
thymus, neonate N30.CNhs11132.1393-42G27.36
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.39
uterus, adult pregnant day19.CNhs10497.590-15F50.19
uterus, adult.CNhs10509.92-27E50.18
vagina, adult.CNhs10502.89-27D50.43
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.56
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.17
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.69
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.45
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.31
whole body, embryo E12.CNhs10587.857-27C92.00
whole body, embryo E13.CNhs10512.372-23H24.44
whole body, embryo E14.5.CNhs10578.420-27D24.13
whole body, embryo E14.CNhs10519.395-14B11.89
whole body, embryo E16.CNhs10514.453-14F20.92
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.11
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G52.27
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G52.25
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.01
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.01
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G52.45
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.40
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G52.63
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G52.01
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.43
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.62
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.54
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G52.88
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.88
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.71
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G52.48
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.43
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.16
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.69
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.78
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.46
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.58
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G52.85
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.68
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.30
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G52.36
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G52.86
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G53.10
whole body, embryo E17.5.CNhs10513.490-9F91.74
whole body, embryo E17.CNhs10517.475-3I51.00
whole body, embryo E18.CNhs10516.493-3B31.64
whole body, neonate N00.CNhs10525.657-19C20.21
whole body, neonate N01.CNhs10576.659-23C60.57
whole body, neonate N06.CNhs10515.692-21D11.99
whole body, neonate N10.CNhs10518.761-6B41.85





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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

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