FFCP PHASE1:Hg19::chr8:117892581..117892609,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr8:117892581..117892609,+|id=chr8:117892581..117892609,+|ontology_enrichment_celltype=CL:0000838!3.01e-19!52;CL:0000542!7.90e-19!53;CL:0000051!7.90e-19!53;CL:0000084!5.52e-18!25;CL:0000827!5.52e-18!25;CL:0000988!2.68e-13!182;CL:0000037!2.20e-10!172;CL:0000566!2.20e-10!172;CL:0000080!3.41e-09!6;CL:0002032!1.26e-08!165;CL:0000837!1.26e-08!165;CL:0002031!1.40e-08!124;CL:0000738!2.13e-08!140;CL:0002127!1.46e-07!1;CL:0000914!1.46e-07!1;CL:0000911!1.46e-07!1;CL:0000814!1.46e-07!1;CL:0002042!1.46e-07!1;CL:0002039!1.46e-07!1;CL:0002040!1.46e-07!1;CL:0002041!1.46e-07!1;CL:0001024!6.88e-07!1;CL:0002087!9.85e-07!119|ontology_enrichment_celltype_v019=CL:0000084;1.16e-41;25!CL:0002127;2.66e-18;1!CL:0000911;2.66e-18;1!CL:0000814;2.66e-18;1!CL:0000542;4.51e-16;53|ontology_enrichment_celltype_v019_2=CL:0000084,1.13e-41,25;CL:0000827,1.13e-41,25;CL:0000838,3.88e-25,52;CL:0000542,1.19e-24,53;CL:0000051,1.19e-24,53;CL:0002127,2.66e-18,1;CL:0000914,2.66e-18,1;CL:0000911,2.66e-18,1;CL:0000814,2.66e-18,1;CL:0002042,2.66e-18,1;CL:0002039,2.66e-18,1;CL:0002040,2.66e-18,1;CL:0002041,2.66e-18,1;CL:0000738,2.47e-11,136;CL:0000037,5.14e-11,168;CL:0002087,6.62e-11,115;CL:0002031,2.01e-10,120;CL:0000988,2.07e-10,177;CL:0000893,7.98e-10,2;CL:0002489,7.98e-10,2;CL:0000809,7.98e-10,2;CL:0000808,7.98e-10,2;CL:0000894,7.98e-10,2;CL:0000806,7.98e-10,2;CL:0000807,7.98e-10,2;CL:0000805,7.98e-10,2;CL:0002425,7.98e-10,2;CL:0002032,1.99e-09,161;CL:0000837,1.99e-09,161|ontology_enrichment_development_v019=CL:0000051;4.51e-16;53!CL:0002425;7.98e-10;2|ontology_enrichment_disease=DOID:2531!1.20e-14!51;DOID:0060083!1.20e-14!51;DOID:0060058!7.30e-10!10;DOID:1240!1.03e-08!39;DOID:4960!1.55e-07!1;DOID:0070004!1.55e-07!1;DOID:0060060!2.67e-07!1;DOID:0060061!2.67e-07!1;DOID:8691!2.67e-07!1;DOID:630!3.01e-07!1;DOID:0050177!3.01e-07!1;DOID:0050427!3.01e-07!1|ontology_enrichment_disease_v019=DOID:0060058;1.28e-26;10!DOID:2531;4.24e-24;51!DOID:0060083;4.24e-24;51!DOID:4960;3.16e-18;1!DOID:0070004;3.16e-18;1!DOID:0060060;1.57e-17;1!DOID:0060061;1.57e-17;1!DOID:8691;1.57e-17;1!DOID:1240;1.59e-15;39!DOID:1036;3.55e-09;8|ontology_enrichment_disease_v019_2=DOID:2531,2.42e-38,51;DOID:0060083,2.42e-38,51;DOID:0060058,1.16e-26,10;DOID:1240,1.78e-20,39;DOID:4960,3.16e-18,1;DOID:0070004,3.16e-18,1;DOID:0060060,1.44e-17,1;DOID:0060061,1.44e-17,1;DOID:8691,1.44e-17,1;DOID:0050686,1.08e-13,137;DOID:1036,3.70e-09,8;DOID:162,1.32e-07,235;DOID:14566,1.99e-07,239|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.152826811495903,0.0821005894499457,0,0.393364276848904,0,0,0,0,0,0,0,0.293600439334847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393010762749165,0,0,0,0,0,1.55974639639243,0,0.664601683750863,0.812411591295047,0.512365278902701,0.520237390239513,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.62194649121976,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,19.0544744788996,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160853921143607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.26048221466044,3.82623054549174,0.798317485731266,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.80402735792079,0,0,0,0,0,0,0,2.63686198762815,0,0,0,0,0,0.246169610922139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.06579894587209,2.5116841023204,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296521128680622,0.86494757262552,0.522109747527277,0,0,0,0,0,0,0,0,0,0,0,0.103688191397247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.2526068168933,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.449947783103001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.59989916683944,0,12.3994785355787,0,0,0,0,0,0,0,0,0.33946505990805,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.397832444232549,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.961705476909699|short_description=p@chr8:117892581..117892609,+}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr8:117892581..117892609,+ | |||
|id=chr8:117892581..117892609,+ | |||
|ontology_enrichment_celltype=CL:0000838!3.01e-19!52;CL:0000542!7.90e-19!53;CL:0000051!7.90e-19!53;CL:0000084!5.52e-18!25;CL:0000827!5.52e-18!25;CL:0000988!2.68e-13!182;CL:0000037!2.20e-10!172;CL:0000566!2.20e-10!172;CL:0000080!3.41e-09!6;CL:0002032!1.26e-08!165;CL:0000837!1.26e-08!165;CL:0002031!1.40e-08!124;CL:0000738!2.13e-08!140;CL:0002127!1.46e-07!1;CL:0000914!1.46e-07!1;CL:0000911!1.46e-07!1;CL:0000814!1.46e-07!1;CL:0002042!1.46e-07!1;CL:0002039!1.46e-07!1;CL:0002040!1.46e-07!1;CL:0002041!1.46e-07!1;CL:0001024!6.88e-07!1;CL:0002087!9.85e-07!119 | |||
|ontology_enrichment_celltype_v019=CL:0000084;1.16e-41;25!CL:0002127;2.66e-18;1!CL:0000911;2.66e-18;1!CL:0000814;2.66e-18;1!CL:0000542;4.51e-16;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000084,1.13e-41,25;CL:0000827,1.13e-41,25;CL:0000838,3.88e-25,52;CL:0000542,1.19e-24,53;CL:0000051,1.19e-24,53;CL:0002127,2.66e-18,1;CL:0000914,2.66e-18,1;CL:0000911,2.66e-18,1;CL:0000814,2.66e-18,1;CL:0002042,2.66e-18,1;CL:0002039,2.66e-18,1;CL:0002040,2.66e-18,1;CL:0002041,2.66e-18,1;CL:0000738,2.47e-11,136;CL:0000037,5.14e-11,168;CL:0002087,6.62e-11,115;CL:0002031,2.01e-10,120;CL:0000988,2.07e-10,177;CL:0000893,7.98e-10,2;CL:0002489,7.98e-10,2;CL:0000809,7.98e-10,2;CL:0000808,7.98e-10,2;CL:0000894,7.98e-10,2;CL:0000806,7.98e-10,2;CL:0000807,7.98e-10,2;CL:0000805,7.98e-10,2;CL:0002425,7.98e-10,2;CL:0002032,1.99e-09,161;CL:0000837,1.99e-09,161 | |||
|ontology_enrichment_development_v019=CL:0000051;4.51e-16;53!CL:0002425;7.98e-10;2 | |||
|ontology_enrichment_disease=DOID:2531!1.20e-14!51;DOID:0060083!1.20e-14!51;DOID:0060058!7.30e-10!10;DOID:1240!1.03e-08!39;DOID:4960!1.55e-07!1;DOID:0070004!1.55e-07!1;DOID:0060060!2.67e-07!1;DOID:0060061!2.67e-07!1;DOID:8691!2.67e-07!1;DOID:630!3.01e-07!1;DOID:0050177!3.01e-07!1;DOID:0050427!3.01e-07!1 | |||
|ontology_enrichment_disease_v019=DOID:0060058;1.28e-26;10!DOID:2531;4.24e-24;51!DOID:0060083;4.24e-24;51!DOID:4960;3.16e-18;1!DOID:0070004;3.16e-18;1!DOID:0060060;1.57e-17;1!DOID:0060061;1.57e-17;1!DOID:8691;1.57e-17;1!DOID:1240;1.59e-15;39!DOID:1036;3.55e-09;8 | |||
|ontology_enrichment_disease_v019_2=DOID:2531,2.42e-38,51;DOID:0060083,2.42e-38,51;DOID:0060058,1.16e-26,10;DOID:1240,1.78e-20,39;DOID:4960,3.16e-18,1;DOID:0070004,3.16e-18,1;DOID:0060060,1.44e-17,1;DOID:0060061,1.44e-17,1;DOID:8691,1.44e-17,1;DOID:0050686,1.08e-13,137;DOID:1036,3.70e-09,8;DOID:162,1.32e-07,235;DOID:14566,1.99e-07,239 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.152826811495903,0.0821005894499457,0,0.393364276848904,0,0,0,0,0,0,0,0.293600439334847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393010762749165,0,0,0,0,0,1.55974639639243,0,0.664601683750863,0.812411591295047,0.512365278902701,0.520237390239513,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.62194649121976,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,19.0544744788996,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160853921143607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.26048221466044,3.82623054549174,0.798317485731266,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.80402735792079,0,0,0,0,0,0,0,2.63686198762815,0,0,0,0,0,0.246169610922139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.06579894587209,2.5116841023204,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296521128680622,0.86494757262552,0.522109747527277,0,0,0,0,0,0,0,0,0,0,0,0.103688191397247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.2526068168933,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.449947783103001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.59989916683944,0,12.3994785355787,0,0,0,0,0,0,0,0,0.33946505990805,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.397832444232549,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.961705476909699 | |||
|short_description=p@chr8:117892581..117892609,+ | |||
}} |
Revision as of 03:16, 14 September 2013
Short description: | p@chr8:117892581..117892609, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr8:117892581..117892609, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
T cell | 1.13e-41 | 25 |
pro-T cell | 1.13e-41 | 25 |
lymphoid lineage restricted progenitor cell | 3.88e-25 | 52 |
lymphocyte | 1.19e-24 | 53 |
common lymphoid progenitor | 1.19e-24 | 53 |
innate effector T cell | 2.66e-18 | 1 |
immature NK T cell | 2.66e-18 | 1 |
effector T cell | 2.66e-18 | 1 |
mature NK T cell | 2.66e-18 | 1 |
immature NK T cell stage IV | 2.66e-18 | 1 |
immature NK T cell stage I | 2.66e-18 | 1 |
immature NK T cell stage II | 2.66e-18 | 1 |
immature NK T cell stage III | 2.66e-18 | 1 |
leukocyte | 2.47e-11 | 136 |
hematopoietic stem cell | 5.14e-11 | 168 |
nongranular leukocyte | 6.62e-11 | 115 |
hematopoietic lineage restricted progenitor cell | 2.01e-10 | 120 |
hematopoietic cell | 2.07e-10 | 177 |
thymocyte | 7.98e-10 | 2 |
double negative thymocyte | 7.98e-10 | 2 |
double-positive, alpha-beta thymocyte | 7.98e-10 | 2 |
DN4 thymocyte | 7.98e-10 | 2 |
DN1 thymic pro-T cell | 7.98e-10 | 2 |
DN2 thymocyte | 7.98e-10 | 2 |
DN3 thymocyte | 7.98e-10 | 2 |
immature single positive thymocyte | 7.98e-10 | 2 |
early T lineage precursor | 7.98e-10 | 2 |
hematopoietic oligopotent progenitor cell | 1.99e-09 | 161 |
hematopoietic multipotent progenitor cell | 1.99e-09 | 161 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 2.42e-38 | 51 |
immune system cancer | 2.42e-38 | 51 |
lymphoma | 1.16e-26 | 10 |
leukemia | 1.78e-20 | 39 |
bone marrow cancer | 3.16e-18 | 1 |
myeloma | 3.16e-18 | 1 |
non-Hodgkin lymphoma | 1.44e-17 | 1 |
cutaneous T cell lymphoma | 1.44e-17 | 1 |
mycosis fungoides | 1.44e-17 | 1 |
organ system cancer | 1.08e-13 | 137 |
chronic leukemia | 3.70e-09 | 8 |
cancer | 1.32e-07 | 235 |
disease of cellular proliferation | 1.99e-07 | 239 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.