FFCP PHASE1:Mm9::chr5:31224198..31224239,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=16548|HGNC=|MCL_coexpression_id=369|UniProt=E9Q1Q9|association_with_transcript=0bp_to_ENSMUST00000117435_5end|description=CAGE_peak_2_at_Khk_5end|id=chr5:31224198..31224239,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000066,6.35e-08,25;CL:0002563,7.69e-07,9;CL:0002251,7.69e-07,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005172!1.44e-11!49;UBERON:0005173!1.44e-11!49;UBERON:0002417!1.44e-11!49;UBERON:0000916!1.44e-11!49;UBERON:0000160!1.73e-11!43;UBERON:0005256!1.43e-10!47;UBERON:0000344!1.16e-09!15;UBERON:0002107!1.91e-09!22;UBERON:0007499!1.91e-09!22;UBERON:0006925!1.91e-09!22;UBERON:0009497!1.91e-09!22;UBERON:0000015!1.91e-09!22;UBERON:0002423!1.91e-09!22;UBERON:0006235!1.91e-09!22;UBERON:0008835!1.91e-09!22;UBERON:0003894!1.91e-09!22;UBERON:0004161!1.91e-09!22;UBERON:0008836!1.91e-09!22;UBERON:0009854!2.02e-09!23;UBERON:0009856!2.02e-09!23;UBERON:0005409!7.00e-09!59;UBERON:0001242!1.24e-08!13;UBERON:0000060!1.24e-08!13;UBERON:0001262!1.24e-08!13;UBERON:0004786!1.24e-08!13;UBERON:0002365!1.42e-08!25;UBERON:0002330!1.42e-08!25;UBERON:0002100!2.99e-08!98;UBERON:0009569!1.18e-07!66;UBERON:0005177!1.93e-07!85|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.57e-12,31;UBERON:0005172,1.02e-11,49;UBERON:0005173,1.02e-11,49;UBERON:0002417,1.02e-11,49;UBERON:0000916,1.02e-11,49;UBERON:0003104,1.16e-11,61;UBERON:0009142,1.16e-11,61;UBERON:0000344,1.50e-10,15;UBERON:0005256,4.55e-10,45;UBERON:0002107,5.28e-10,22;UBERON:0007499,5.28e-10,22;UBERON:0006925,5.28e-10,22;UBERON:0009497,5.28e-10,22;UBERON:0000015,5.28e-10,22;UBERON:0002423,5.28e-10,22;UBERON:0006235,5.28e-10,22;UBERON:0008835,5.28e-10,22;UBERON:0003894,5.28e-10,22;UBERON:0004161,5.28e-10,22;UBERON:0008836,5.28e-10,22;UBERON:0009854,5.52e-10,23;UBERON:0009856,5.52e-10,23;UBERON:0001242,2.08e-09,13;UBERON:0001262,2.08e-09,13;UBERON:0004786,2.08e-09,13;UBERON:0005409,1.46e-08,47;UBERON:0002365,2.39e-08,25;UBERON:0002330,2.39e-08,25;UBERON:0002100,4.65e-08,90;UBERON:0005177,1.08e-07,79;UBERON:0009569,7.18e-07,66;UBERON:0003350,7.69e-07,9;UBERON:0004808,7.69e-07,9;UBERON:0001277,7.69e-07,9;UBERON:0000485,8.74e-07,11|phase1_expression=1.44133962394315,64.2114750056424,45.4999239389536,106.467402380004,101.681833179108,9.06548068324205,13.5495331545405,0.516493293766305,0.140788722151667,0.234064526321993,0.171217968225505,0,0.171200729931206,0.437102012094987,1.99865857089398,0.607425802169478,4.89693314689703,0.946386496074713,0.685572168028694,0.84877930359606,8.50432901510698,1.09220046320974,0.783599367416806,30.7185451763341,29.5937972576649,59.7201242679621,48.2453435698164,31.2433287394539,45.225573830617,47.1296342651071,9.75614246883341,4.44521471421742,3.69038872550742,0,9.53210345179206,12.9663023379624,9.80012910059372,6.27797446105362,3.906676722619,3.66466620781659,2.94115744015507,4.78131839470912,3.88408282424923,4.15459499319405,2.83855407414641,1.65192076945513,7.04152209913235,2.18025156380447,2.85592037554813,3.11087838518853,2.79972843250725,4.31257693094915,0.167782606057736,0,0.336093799142464,0.514518872071894,0.573066879877513,0.515672092277442,0.606949382578793,0.528990979272033,0,3.38844532069132,2.66788438833342,2.6996991518442,2.96659908770092,5.6838409195688,1.79760066311043,3.45796474789399,0.207379224616955,0.135005938331691,0,0.856952953211411,1.10434270475807,0.122490799214954,0.0958454710182364,0,2.20231761998777,1.0214987046815,1.38245879930619,0,0.182975287204819,0.52091337055676,2.23346399201105,1.12552522006336,0.61119299110724,0.294628585473668,0.996601765593721,0,0.075726193333184,0.226714680320357,4.34796733052517,55.0671281268087,59.1575060325743,63.1452734216246,77.3233936762726,66.3079792904057,21.6284407002898,0,0,0,3.09855523508697,0,0,0,1.94841936910093,0.253359865475099,1.01104889002957,38.137415826166,0.258937883647172,3.41416919849097,2.94925055502431,2.43572382649713,2.53677046981664,3.91878865436819,2.58695155698551,3.76999773989026,1.23597483867187,0.722996784599558,2.65383165584962,0.323533699894818,0.441683036920787,0.969750506270444,1.86391761218122,0.292780797011547,0.209446706813455,46.4931840479636,5.03223522924865,7.19883277192089,5.08280908292259,0.898743836428936,1.83000241127451,0,0.869121600961382,1.27857728665165,0.41557608911912,1.29793010454206,0.916554274652847,0.995255764880744,4.0435641349388,1.26265113531884,0.780722657776222,1.60931473103431,0.900310649026746,0.90422890701429,0.340182495756639,0.512454881139399,0.374806898238915,0.776110112217047,0.862271971731369,0.189106080167819,0.527853372491847,1.53437012699302,0.278047249225598,0.696504333044333,0.823128545631774,0.398068533636986,7.02213187313235,5.40430604940902,3.40996199274711,0.621377317606506,0.234526059981096,0.180062061461015,0.473489471170421,0.196764231747404,0.308534225774757,0.232533944750408,0.268273401399619,0.583826711835847,0.329119699826961,0.32833492815819,0.810688095458557,1.90059983652932,0.439100230582101,1.878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| ||
|EntrezGene=16548 | |||
|HGNC= | |||
|MCL_coexpression_id=369 | |||
|UniProt=E9Q1Q9 | |||
|association_with_transcript=0bp_to_ENSMUST00000117435_5end | |||
|description=CAGE_peak_2_at_Khk_5end | |||
|id=chr5:31224198..31224239,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,6.35e-08,25;CL:0002563,7.69e-07,9;CL:0002251,7.69e-07,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005172!1.44e-11!49;UBERON:0005173!1.44e-11!49;UBERON:0002417!1.44e-11!49;UBERON:0000916!1.44e-11!49;UBERON:0000160!1.73e-11!43;UBERON:0005256!1.43e-10!47;UBERON:0000344!1.16e-09!15;UBERON:0002107!1.91e-09!22;UBERON:0007499!1.91e-09!22;UBERON:0006925!1.91e-09!22;UBERON:0009497!1.91e-09!22;UBERON:0000015!1.91e-09!22;UBERON:0002423!1.91e-09!22;UBERON:0006235!1.91e-09!22;UBERON:0008835!1.91e-09!22;UBERON:0003894!1.91e-09!22;UBERON:0004161!1.91e-09!22;UBERON:0008836!1.91e-09!22;UBERON:0009854!2.02e-09!23;UBERON:0009856!2.02e-09!23;UBERON:0005409!7.00e-09!59;UBERON:0001242!1.24e-08!13;UBERON:0000060!1.24e-08!13;UBERON:0001262!1.24e-08!13;UBERON:0004786!1.24e-08!13;UBERON:0002365!1.42e-08!25;UBERON:0002330!1.42e-08!25;UBERON:0002100!2.99e-08!98;UBERON:0009569!1.18e-07!66;UBERON:0005177!1.93e-07!85 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.57e-12,31;UBERON:0005172,1.02e-11,49;UBERON:0005173,1.02e-11,49;UBERON:0002417,1.02e-11,49;UBERON:0000916,1.02e-11,49;UBERON:0003104,1.16e-11,61;UBERON:0009142,1.16e-11,61;UBERON:0000344,1.50e-10,15;UBERON:0005256,4.55e-10,45;UBERON:0002107,5.28e-10,22;UBERON:0007499,5.28e-10,22;UBERON:0006925,5.28e-10,22;UBERON:0009497,5.28e-10,22;UBERON:0000015,5.28e-10,22;UBERON:0002423,5.28e-10,22;UBERON:0006235,5.28e-10,22;UBERON:0008835,5.28e-10,22;UBERON:0003894,5.28e-10,22;UBERON:0004161,5.28e-10,22;UBERON:0008836,5.28e-10,22;UBERON:0009854,5.52e-10,23;UBERON:0009856,5.52e-10,23;UBERON:0001242,2.08e-09,13;UBERON:0001262,2.08e-09,13;UBERON:0004786,2.08e-09,13;UBERON:0005409,1.46e-08,47;UBERON:0002365,2.39e-08,25;UBERON:0002330,2.39e-08,25;UBERON:0002100,4.65e-08,90;UBERON:0005177,1.08e-07,79;UBERON:0009569,7.18e-07,66;UBERON:0003350,7.69e-07,9;UBERON:0004808,7.69e-07,9;UBERON:0001277,7.69e-07,9;UBERON:0000485,8.74e-07,11 | |||
|phase1_expression=1.44133962394315,64.2114750056424,45.4999239389536,106.467402380004,101.681833179108,9.06548068324205,13.5495331545405,0.516493293766305,0.140788722151667,0.234064526321993,0.171217968225505,0,0.171200729931206,0.437102012094987,1.99865857089398,0.607425802169478,4.89693314689703,0.946386496074713,0.685572168028694,0.84877930359606,8.50432901510698,1.09220046320974,0.783599367416806,30.7185451763341,29.5937972576649,59.7201242679621,48.2453435698164,31.2433287394539,45.225573830617,47.1296342651071,9.75614246883341,4.44521471421742,3.69038872550742,0,9.53210345179206,12.9663023379624,9.80012910059372,6.27797446105362,3.906676722619,3.66466620781659,2.94115744015507,4.78131839470912,3.88408282424923,4.15459499319405,2.83855407414641,1.65192076945513,7.04152209913235,2.18025156380447,2.85592037554813,3.11087838518853,2.79972843250725,4.31257693094915,0.167782606057736,0,0.336093799142464,0.514518872071894,0.573066879877513,0.515672092277442,0.606949382578793,0.528990979272033,0,3.38844532069132,2.66788438833342,2.6996991518442,2.96659908770092,5.6838409195688,1.79760066311043,3.45796474789399,0.207379224616955,0.135005938331691,0,0.856952953211411,1.10434270475807,0.122490799214954,0.0958454710182364,0,2.20231761998777,1.0214987046815,1.38245879930619,0,0.182975287204819,0.52091337055676,2.23346399201105,1.12552522006336,0.61119299110724,0.294628585473668,0.996601765593721,0,0.075726193333184,0.226714680320357,4.34796733052517,55.0671281268087,59.1575060325743,63.1452734216246,77.3233936762726,66.3079792904057,21.6284407002898,0,0,0,3.09855523508697,0,0,0,1.94841936910093,0.253359865475099,1.01104889002957,38.137415826166,0.258937883647172,3.41416919849097,2.94925055502431,2.43572382649713,2.53677046981664,3.91878865436819,2.58695155698551,3.76999773989026,1.23597483867187,0.722996784599558,2.65383165584962,0.323533699894818,0.441683036920787,0.969750506270444,1.86391761218122,0.292780797011547,0.209446706813455,46.4931840479636,5.03223522924865,7.19883277192089,5.08280908292259,0.898743836428936,1.83000241127451,0,0.869121600961382,1.27857728665165,0.41557608911912,1.29793010454206,0.916554274652847,0.995255764880744,4.0435641349388,1.26265113531884,0.780722657776222,1.60931473103431,0.900310649026746,0.90422890701429,0.340182495756639,0.512454881139399,0.374806898238915,0.776110112217047,0.862271971731369,0.189106080167819,0.527853372491847,1.53437012699302,0.278047249225598,0.696504333044333,0.823128545631774,0.398068533636986,7.02213187313235,5.40430604940902,3.40996199274711,0.621377317606506,0.234526059981096,0.180062061461015,0.473489471170421,0.196764231747404,0.308534225774757,0.232533944750408,0.268273401399619,0.583826711835847,0.329119699826961,0.32833492815819,0.810688095458557,1.90059983652932,0.439100230582101,1.8788898626452,0.841159794256509,0.411618449517138,100.116891244091,35.1719253662514,0.853153002140936,0.464473343720877,0.515469845288373,1.21010114774006,1.55664630691409,3.04361001780095,39.3859121081945,15.317002789333,11.0587491872119,10.7436494902221,12.0877734013854,33.2563181202062,39.9855392268184,40.2265371973822,2.27601481143698,1.94222471436539,1.1270773567308,1.01825663922657,4.65485969202302,3.57692681440625,11.5090497566148,25.8317758964304,39.5636794160265,39.1169009632108,67.8876516029571,2.00214126859313,0.786235980452812,1.79889689907883,2.43432145666204,3.37648023653384,3.05551022137704,3.16465751195892,4.70192157647603,5.49122826376163,4.31304619582064,19.7234702264307,27.4593152340813,34.0981485228601,42.1583921776494,52.586343828607,0.923765950833023,1.32643988239339,0.814824882210129,0.678980343100753,0.704070744865506,0.837531287209079,0.238043640886014,2.14647012643579,0.157635144106191,0.44292937929755,0.797273843287435,0.983179888294428,1.20879487306127,2.60368305446721,4.52373851817817,1.08781136763742,0.983528546038072,0.827810238914197,1.9266070798535,1.40654023910644,1.14754461763673,2.27223834483936,0.315508219416257,0,0,0,0.222798674082394,0.283076530788832,0,0,0.395287777946524,1.92792789853084,1.56134093729095,0.890328018336276,1.62886959353576,0.989820737835213,2.65490276679926,0.728341908464944,1.209294227859,1.32023555829129,2.36241514304618,2.15204603560749,2.32585463851399,1.45413491791002,3.20847640546249,2.52829406348653,1.05418608574999,1.03135543248187,2.04263763452273,0.540183282093931,1.55230420539305,1.71469628025274,1.24138163549592,1.07021290561242,1.64549020602121,1.8267896946876,0,0.21183207086382,2.64634077665954,0.65954501176592,0.807322133479528,0.542816324353403,1.19372344003136,0.492422699235184,41.098797964809,2.41052892613663,0.341741761595705,1.65109494370578,0.555583582109135,1.88368457004691,1.0935538217682,1.14389086603261,2.88963330989554,3.07893195112048,3.04039942369732,1.90934123603023,0.474503990371703,1.01659733563424,0.756037385752609,0.418176592028937,0.655087691238533,1.21377911746339,1.90102948168273,1.83229159388821,5.18459893167171,1.86401793926078,1.12738587736838,0.448549638131936,1.4891264141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| |||
|short_description=p2@Khk | |||
}} | |||
Revision as of 07:24, 14 September 2013
| Short description: | p2@Khk |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_2_at_Khk_5end |
| Coexpression cluster: | MCL_coexpression_mm9:369 |
| Association with transcript: | 0bp_to_ENSMUST00000117435_5end |
| EntrezGene: | Khk |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
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CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| epithelial cell | 6.35e-08 | 25 |
| intestinal epithelial cell | 7.69e-07 | 9 |
| epithelial cell of alimentary canal | 7.69e-07 | 9 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
